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CRAN Package Check Results for Package stxplore

Last updated on 2026-10-13 17:52:41 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1.0 15.97 228.01 243.98 ERROR
r-devel-linux-x86_64-debian-gcc 0.1.0 9.45 171.46 180.91 ERROR
r-devel-linux-x86_64-fedora-clang 0.1.0 13.00 170.93 183.93 ERROR
r-devel-linux-x86_64-fedora-gcc 0.1.0 12.00 169.15 181.15 ERROR
r-devel-windows-x86_64 0.1.0 18.00 313.00 331.00 OK
r-patched-linux-x86_64 0.1.0 16.17 251.10 267.27 OK
r-release-linux-x86_64 0.1.0 15.10 246.13 261.23 OK
r-release-macos-arm64 0.1.0 4.00 73.00 77.00 OK
r-release-macos-x86_64 0.1.0 12.00 292.00 304.00 OK
r-release-windows-x86_64 0.1.0 16.00 259.00 275.00 OK
r-oldrel-macos-arm64 0.1.0 OK
r-oldrel-macos-x86_64 0.1.0 10.00 234.00 244.00 OK
r-oldrel-windows-x86_64 0.1.0 22.00 353.00 375.00 OK

Check Details

Version: 0.1.0
Check: examples
Result: ERROR Running examples in ‘stxplore-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: semivariogram > ### Title: Computes the semi-variogram using a dataframe or a stars object. > ### Aliases: semivariogram semivariogram.data.frame semivariogram.stars > ### autoplot.semivariogramobj > > ### ** Examples > > # Dataframe example > library(dplyr) Attaching package: ‘dplyr’ The following objects are masked from ‘package:stats’: filter, lag The following objects are masked from ‘package:base’: intersect, setdiff, setequal, union > data(locs) > data(Times) > data(Tmax) > temp_part <- with(Times, paste(year, month, day, sep = "-")) > temp_part <- data.frame(date = as.Date(temp_part)[913:923]) > Tmax <- Tmax[913:923, ] > semidf <- semivariogram(locs, + temp_part, + Tmax, + latitude_linear = FALSE, + longitude_linear = FALSE, + missing_value = -9999, + width = 50, + cutoff = 1000, + tlagmax = 7 + ) Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions > autoplot(semidf) > > # Stars example > library(stars) Loading required package: abind Loading required package: sf Linking to GEOS 3.15.0, GDAL 3.13.3, PROJ 9.9.0; sf_use_s2() is TRUE > # Create a stars object from a data frame > precip_df <- NOAA_df_1990[NOAA_df_1990$proc == 'Precip', ] %>% + filter(date >= "1992-02-01" & date <= "1992-02-05") > precip <- precip_df[ ,c('lat', 'lon', 'date', 'z')] > st_precip <- st_as_stars(precip, dims = c("lon", "lat", "date")) > semist <- semivariogram(st_precip) Error in semivariogram.data.frame(locations_df, latitude_linear = latitude_linear, : The dataframe values_df needs to have T x N dimensions, T = number of times N = number of locations. Calls: semivariogram -> semivariogram.stars -> semivariogram.data.frame Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.1.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘stxplore.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘stxplore.Rmd’ --- re-building ‘stxplore_stars.Rmd’ using rmarkdown Quitting from stxplore_stars.Rmd:155-158 [semivariogram1] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `semivariogram.data.frame()`: ! The dataframe values_df needs to have T x N dimensions, T = number of times N = number of locations. --- Backtrace: ▆ 1. ├─stxplore::semivariogram(aerosol_region) 2. └─stxplore:::semivariogram.stars(aerosol_region) 3. └─stxplore:::semivariogram.data.frame(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'stxplore_stars.Rmd' failed with diagnostics: The dataframe values_df needs to have T x N dimensions, T = number of times N = number of locations. --- failed re-building ‘stxplore_stars.Rmd’ SUMMARY: processing the following file failed: ‘stxplore_stars.Rmd’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.1.0
Check: examples
Result: ERROR Running examples in ‘stxplore-Ex.R’ failed The error most likely occurred in: > ### Name: semivariogram > ### Title: Computes the semi-variogram using a dataframe or a stars object. > ### Aliases: semivariogram semivariogram.data.frame semivariogram.stars > ### autoplot.semivariogramobj > > ### ** Examples > > # Dataframe example > library(dplyr) Attaching package: ‘dplyr’ The following objects are masked from ‘package:stats’: filter, lag The following objects are masked from ‘package:base’: intersect, setdiff, setequal, union > data(locs) > data(Times) > data(Tmax) > temp_part <- with(Times, paste(year, month, day, sep = "-")) > temp_part <- data.frame(date = as.Date(temp_part)[913:923]) > Tmax <- Tmax[913:923, ] > semidf <- semivariogram(locs, + temp_part, + Tmax, + latitude_linear = FALSE, + longitude_linear = FALSE, + missing_value = -9999, + width = 50, + cutoff = 1000, + tlagmax = 7 + ) Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions Warning in `[.xts`(x@time, j) : converting 'i' to integer because it appears to contain fractions > autoplot(semidf) > > # Stars example > library(stars) Loading required package: abind Loading required package: sf Linking to GEOS 3.14.1, GDAL 3.12.4, PROJ 9.8.1; sf_use_s2() is TRUE > # Create a stars object from a data frame > precip_df <- NOAA_df_1990[NOAA_df_1990$proc == 'Precip', ] %>% + filter(date >= "1992-02-01" & date <= "1992-02-05") > precip <- precip_df[ ,c('lat', 'lon', 'date', 'z')] > st_precip <- st_as_stars(precip, dims = c("lon", "lat", "date")) > semist <- semivariogram(st_precip) Error in semivariogram.data.frame(locations_df, latitude_linear = latitude_linear, : The dataframe values_df needs to have T x N dimensions, T = number of times N = number of locations. Calls: semivariogram -> semivariogram.stars -> semivariogram.data.frame Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.1.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘stxplore.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘stxplore.Rmd’ --- re-building ‘stxplore_stars.Rmd’ using rmarkdown Quitting from stxplore_stars.Rmd:155-158 [semivariogram1] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `semivariogram.data.frame()`: ! The dataframe values_df needs to have T x N dimensions, T = number of times N = number of locations. --- Backtrace: ▆ 1. ├─stxplore::semivariogram(aerosol_region) 2. └─stxplore:::semivariogram.stars(aerosol_region) 3. └─stxplore:::semivariogram.data.frame(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'stxplore_stars.Rmd' failed with diagnostics: The dataframe values_df needs to have T x N dimensions, T = number of times N = number of locations. --- failed re-building ‘stxplore_stars.Rmd’ SUMMARY: processing the following file failed: ‘stxplore_stars.Rmd’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

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