CRAN Package Check Results for Package stacks

Last updated on 2025-05-17 09:49:25 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.0 11.15 275.12 286.27 ERROR
r-devel-linux-x86_64-debian-gcc 1.1.0 8.21 184.59 192.80 ERROR
r-devel-linux-x86_64-fedora-clang 1.1.0 485.07 ERROR
r-devel-linux-x86_64-fedora-gcc 1.1.0 482.93 ERROR
r-devel-windows-x86_64 1.1.0 14.00 278.00 292.00 OK
r-patched-linux-x86_64 1.1.0 12.30 282.62 294.92 OK
r-release-linux-x86_64 1.1.0 11.30 284.84 296.14 OK
r-release-macos-arm64 1.1.0 116.00 OK
r-release-macos-x86_64 1.1.0 173.00 OK
r-release-windows-x86_64 1.1.0 14.00 278.00 292.00 OK
r-oldrel-macos-arm64 1.1.0 132.00 OK
r-oldrel-macos-x86_64 1.1.0 213.00 OK
r-oldrel-windows-x86_64 1.1.0 16.00 268.00 284.00 OK

Check Details

Version: 1.1.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘basics.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/stacks.Rcheck/vign_test/stacks/vignettes/basics_files/figure-html/unnamed-chunk-4-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 26881 bytes Input file size = 26995 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20284 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20284 Output IDAT size = 20284 bytes (6597 bytes decrease) Output file size = 20362 bytes (6633 bytes = 24.57% decrease) Quitting from basics.Rmd:196-209 [unnamed-chunk-11] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NULL ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'basics.Rmd' failed with diagnostics: Package install is required for kknn. --- failed re-building ‘basics.Rmd’ --- re-building ‘classification.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/stacks.Rcheck/vign_test/stacks/vignettes/classification_files/figure-html/unnamed-chunk-4-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 27931 bytes Input file size = 28045 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20936 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20936 Output IDAT size = 20936 bytes (6995 bytes decrease) Output file size = 21014 bytes (7031 bytes = 25.07% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/stacks.Rcheck/vign_test/stacks/vignettes/classification_files/figure-html/penalty-plot-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 8712 bytes Input file size = 9582 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8152 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8152 Output IDAT size = 8152 bytes (560 bytes decrease) Output file size = 8230 bytes (1352 bytes = 14.11% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/stacks.Rcheck/vign_test/stacks/vignettes/classification_files/figure-html/members-plot-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 6607 bytes Input file size = 7465 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6134 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6134 Output IDAT size = 6134 bytes (473 bytes decrease) Output file size = 6212 bytes (1253 bytes = 16.78% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/stacks.Rcheck/vign_test/stacks/vignettes/classification_files/figure-html/weight-plot-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 18567 bytes Input file size = 18669 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13162 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13162 Output IDAT size = 13162 bytes (5405 bytes decrease) Output file size = 13240 bytes (5429 bytes = 29.08% decrease) --- finished re-building ‘classification.Rmd’ SUMMARY: processing the following file failed: ‘basics.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.1.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘basics.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/stacks.Rcheck/vign_test/stacks/vignettes/basics_files/figure-html/unnamed-chunk-4-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 26881 bytes Input file size = 26995 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20284 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20284 Output IDAT size = 20284 bytes (6597 bytes decrease) Output file size = 20362 bytes (6633 bytes = 24.57% decrease) Quitting from basics.Rmd:196-209 [unnamed-chunk-11] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NULL ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'basics.Rmd' failed with diagnostics: Package install is required for kknn. --- failed re-building ‘basics.Rmd’ --- re-building ‘classification.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/stacks.Rcheck/vign_test/stacks/vignettes/classification_files/figure-html/unnamed-chunk-4-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 27513 bytes Input file size = 27627 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20565 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20565 Output IDAT size = 20565 bytes (6948 bytes decrease) Output file size = 20643 bytes (6984 bytes = 25.28% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/stacks.Rcheck/vign_test/stacks/vignettes/classification_files/figure-html/penalty-plot-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 8712 bytes Input file size = 9582 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8152 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8152 Output IDAT size = 8152 bytes (560 bytes decrease) Output file size = 8230 bytes (1352 bytes = 14.11% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/stacks.Rcheck/vign_test/stacks/vignettes/classification_files/figure-html/members-plot-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 6607 bytes Input file size = 7465 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6134 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6134 Output IDAT size = 6134 bytes (473 bytes decrease) Output file size = 6212 bytes (1253 bytes = 16.78% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/stacks.Rcheck/vign_test/stacks/vignettes/classification_files/figure-html/weight-plot-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 18567 bytes Input file size = 18669 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13162 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13162 Output IDAT size = 13162 bytes (5405 bytes decrease) Output file size = 13240 bytes (5429 bytes = 29.08% decrease) --- finished re-building ‘classification.Rmd’ SUMMARY: processing the following file failed: ‘basics.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.1.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘basics.Rmd’ using rmarkdown Quitting from basics.Rmd:196-209 [unnamed-chunk-11] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NULL ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'basics.Rmd' failed with diagnostics: Package install is required for kknn. --- failed re-building ‘basics.Rmd’ --- re-building ‘classification.Rmd’ using rmarkdown --- finished re-building ‘classification.Rmd’ SUMMARY: processing the following file failed: ‘basics.Rmd’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

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