CRAN Package Check Results for Package spam

Last updated on 2025-12-04 09:50:07 CET.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	2.11-1	42.15	143.79	185.94	ERROR
r-devel-linux-x86_64-debian-gcc	2.11-1	27.21	99.84	127.05	ERROR
r-devel-linux-x86_64-fedora-clang	2.11-1	114.00	188.95	302.95	ERROR
r-devel-linux-x86_64-fedora-gcc	2.11-1	49.00	241.95	290.95	ERROR
r-devel-windows-x86_64	2.11-1	52.00	185.00	237.00	ERROR
r-patched-linux-x86_64	2.11-1	37.28	131.69	168.97	OK
r-release-linux-x86_64	2.11-1	32.90	136.96	169.86	OK
r-release-macos-arm64	2.11-1				OK
r-release-macos-x86_64	2.11-1	28.00	132.00	160.00	OK
r-release-windows-x86_64	2.11-1	56.00	196.00	252.00	OK
r-oldrel-macos-arm64	2.11-1				OK
r-oldrel-macos-x86_64	2.11-1	49.00	168.00	217.00	NOTE
r-oldrel-windows-x86_64	2.11-1	67.00	226.00	293.00	OK

Additional issues

M1mac

Check Details

Version: 2.11-1
Check: tests
Result: ERROR Running ‘demo_cholesky.R’ [1s/2s] Comparing ‘demo_cholesky.Rout’ to ‘demo_cholesky.Rout.save’ ... OK Running ‘demo_jss10-example1.R’ [3s/3s] Comparing ‘demo_jss10-example1.Rout’ to ‘demo_jss10-example1.Rout.save’ ... OK Running ‘demo_jss10-figures-table.R’ [7s/8s] Comparing ‘demo_jss10-figures-table.Rout’ to ‘demo_jss10-figures-table.Rout.save’ ... OK Running ‘demo_jss15-BYM.R’ [2s/3s] Comparing ‘demo_jss15-BYM.Rout’ to ‘demo_jss15-BYM.Rout.save’ ... OK Running ‘demo_jss15-Leroux.R’ [3s/4s] Comparing ‘demo_jss15-Leroux.Rout’ to ‘demo_jss15-Leroux.Rout.save’ ... OK Running ‘demo_spam.R’ [1s/2s] Comparing ‘demo_spam.Rout’ to ‘demo_spam.Rout.save’ ... OK Running ‘demo_timing.R’ [3s/3s] Comparing ‘demo_timing.Rout’ to ‘demo_timing.Rout.save’ ... OK Running ‘jss_areal_counts.R’ [2s/3s] Comparing ‘jss_areal_counts.Rout’ to ‘jss_areal_counts.Rout.save’ ... OK Running ‘testthat.R’ [9s/13s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # HEADER #################################################### > # This is file spam/tests/testthat.R. # > # It is part of the R package spam, # > # --> https://CRAN.R-project.org/package=spam # > # --> https://CRAN.R-project.org/package=spam64 # > # --> https://git.math.uzh.ch/reinhard.furrer/spam # > # by Reinhard Furrer [aut, cre], Florian Gerber [aut], # > # Roman Flury [aut], Daniel Gerber [ctb], # > # Kaspar Moesinger [ctb] # > # HEADER END ################################################ > > library("testthat") > # library("spam") > > test_check("spam") Loading required package: spam Spam version 2.11-1 (2025-01-20) is loaded. Type 'help( Spam)' or 'demo( spam)' for a short introduction and overview of this package. Help for individual functions is also obtained by adding the suffix '.spam' to the function name, e.g. 'help( chol.spam)'. Attaching package: 'spam' The following objects are masked from 'package:base': backsolve, forwardsolve Saving _problems/test-diff-33.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 729 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-diff.R:33:5'): diff ────────────────────────────────────────── Expected `diff(x, 4, d = 4)` to equal `diff(as.spam(x), 4, d = 4)`. Differences: Attributes: < Modes: list, NULL > Attributes: < Lengths: 1, 0 > Attributes: < names for target but not for current > Attributes: < current is not list-like > [ FAIL 1 | WARN 0 | SKIP 0 | PASS 729 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 2.11-1
Check: tests
Result: ERROR Running ‘demo_cholesky.R’ [1s/1s] Comparing ‘demo_cholesky.Rout’ to ‘demo_cholesky.Rout.save’ ... OK Running ‘demo_jss10-example1.R’ [2s/2s] Comparing ‘demo_jss10-example1.Rout’ to ‘demo_jss10-example1.Rout.save’ ... OK Running ‘demo_jss10-figures-table.R’ [7s/9s] Comparing ‘demo_jss10-figures-table.Rout’ to ‘demo_jss10-figures-table.Rout.save’ ... OK Running ‘demo_jss15-BYM.R’ [1s/2s] Comparing ‘demo_jss15-BYM.Rout’ to ‘demo_jss15-BYM.Rout.save’ ... OK Running ‘demo_jss15-Leroux.R’ [2s/3s] Comparing ‘demo_jss15-Leroux.Rout’ to ‘demo_jss15-Leroux.Rout.save’ ... OK Running ‘demo_spam.R’ [1s/1s] Comparing ‘demo_spam.Rout’ to ‘demo_spam.Rout.save’ ... OK Running ‘demo_timing.R’ [3s/4s] Comparing ‘demo_timing.Rout’ to ‘demo_timing.Rout.save’ ... OK Running ‘jss_areal_counts.R’ [1s/2s] Comparing ‘jss_areal_counts.Rout’ to ‘jss_areal_counts.Rout.save’ ... OK Running ‘testthat.R’ [6s/8s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # HEADER #################################################### > # This is file spam/tests/testthat.R. # > # It is part of the R package spam, # > # --> https://CRAN.R-project.org/package=spam # > # --> https://CRAN.R-project.org/package=spam64 # > # --> https://git.math.uzh.ch/reinhard.furrer/spam # > # by Reinhard Furrer [aut, cre], Florian Gerber [aut], # > # Roman Flury [aut], Daniel Gerber [ctb], # > # Kaspar Moesinger [ctb] # > # HEADER END ################################################ > > library("testthat") > # library("spam") > > test_check("spam") Loading required package: spam Spam version 2.11-1 (2025-01-20) is loaded. Type 'help( Spam)' or 'demo( spam)' for a short introduction and overview of this package. Help for individual functions is also obtained by adding the suffix '.spam' to the function name, e.g. 'help( chol.spam)'. Attaching package: 'spam' The following objects are masked from 'package:base': backsolve, forwardsolve Saving _problems/test-diff-33.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 729 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-diff.R:33:5'): diff ────────────────────────────────────────── Expected `diff(x, 4, d = 4)` to equal `diff(as.spam(x), 4, d = 4)`. Differences: Attributes: < Modes: list, NULL > Attributes: < Lengths: 1, 0 > Attributes: < names for target but not for current > Attributes: < current is not list-like > [ FAIL 1 | WARN 0 | SKIP 0 | PASS 729 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 2.11-1
Check: tests
Result: ERROR Running ‘demo_cholesky.R’ Comparing ‘demo_cholesky.Rout’ to ‘demo_cholesky.Rout.save’ ... OK Running ‘demo_jss10-example1.R’ Comparing ‘demo_jss10-example1.Rout’ to ‘demo_jss10-example1.Rout.save’ ... OK Running ‘demo_jss10-figures-table.R’ [10s/15s] Comparing ‘demo_jss10-figures-table.Rout’ to ‘demo_jss10-figures-table.Rout.save’ ... OK Running ‘demo_jss15-BYM.R’ Comparing ‘demo_jss15-BYM.Rout’ to ‘demo_jss15-BYM.Rout.save’ ... OK Running ‘demo_jss15-Leroux.R’ Comparing ‘demo_jss15-Leroux.Rout’ to ‘demo_jss15-Leroux.Rout.save’ ... OK Running ‘demo_spam.R’ Comparing ‘demo_spam.Rout’ to ‘demo_spam.Rout.save’ ... OK Running ‘demo_timing.R’ Comparing ‘demo_timing.Rout’ to ‘demo_timing.Rout.save’ ... OK Running ‘jss_areal_counts.R’ Comparing ‘jss_areal_counts.Rout’ to ‘jss_areal_counts.Rout.save’ ... OK Running ‘testthat.R’ [14s/22s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # HEADER #################################################### > # This is file spam/tests/testthat.R. # > # It is part of the R package spam, # > # --> https://CRAN.R-project.org/package=spam # > # --> https://CRAN.R-project.org/package=spam64 # > # --> https://git.math.uzh.ch/reinhard.furrer/spam # > # by Reinhard Furrer [aut, cre], Florian Gerber [aut], # > # Roman Flury [aut], Daniel Gerber [ctb], # > # Kaspar Moesinger [ctb] # > # HEADER END ################################################ > > library("testthat") > # library("spam") > > test_check("spam") Loading required package: spam Spam version 2.11-1 (2025-01-20) is loaded. Type 'help( Spam)' or 'demo( spam)' for a short introduction and overview of this package. Help for individual functions is also obtained by adding the suffix '.spam' to the function name, e.g. 'help( chol.spam)'. Attaching package: 'spam' The following objects are masked from 'package:base': backsolve, forwardsolve Saving _problems/test-diff-33.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 729 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-diff.R:33:5'): diff ────────────────────────────────────────── Expected `diff(x, 4, d = 4)` to equal `diff(as.spam(x), 4, d = 4)`. Differences: Attributes: < Modes: list, NULL > Attributes: < Lengths: 1, 0 > Attributes: < names for target but not for current > Attributes: < current is not list-like > [ FAIL 1 | WARN 0 | SKIP 0 | PASS 729 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 2.11-1
Check: tests
Result: ERROR Running ‘demo_cholesky.R’ Comparing ‘demo_cholesky.Rout’ to ‘demo_cholesky.Rout.save’ ... OK Running ‘demo_jss10-example1.R’ Comparing ‘demo_jss10-example1.Rout’ to ‘demo_jss10-example1.Rout.save’ ... OK Running ‘demo_jss10-figures-table.R’ Comparing ‘demo_jss10-figures-table.Rout’ to ‘demo_jss10-figures-table.Rout.save’ ... OK Running ‘demo_jss15-BYM.R’ Comparing ‘demo_jss15-BYM.Rout’ to ‘demo_jss15-BYM.Rout.save’ ... OK Running ‘demo_jss15-Leroux.R’ Comparing ‘demo_jss15-Leroux.Rout’ to ‘demo_jss15-Leroux.Rout.save’ ... OK Running ‘demo_spam.R’ Comparing ‘demo_spam.Rout’ to ‘demo_spam.Rout.save’ ... OK Running ‘demo_timing.R’ Comparing ‘demo_timing.Rout’ to ‘demo_timing.Rout.save’ ... OK Running ‘jss_areal_counts.R’ Comparing ‘jss_areal_counts.Rout’ to ‘jss_areal_counts.Rout.save’ ... OK Running ‘testthat.R’ [14s/14s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # HEADER #################################################### > # This is file spam/tests/testthat.R. # > # It is part of the R package spam, # > # --> https://CRAN.R-project.org/package=spam # > # --> https://CRAN.R-project.org/package=spam64 # > # --> https://git.math.uzh.ch/reinhard.furrer/spam # > # by Reinhard Furrer [aut, cre], Florian Gerber [aut], # > # Roman Flury [aut], Daniel Gerber [ctb], # > # Kaspar Moesinger [ctb] # > # HEADER END ################################################ > > library("testthat") > # library("spam") > > test_check("spam") Loading required package: spam Spam version 2.11-1 (2025-01-20) is loaded. Type 'help( Spam)' or 'demo( spam)' for a short introduction and overview of this package. Help for individual functions is also obtained by adding the suffix '.spam' to the function name, e.g. 'help( chol.spam)'. Attaching package: 'spam' The following objects are masked from 'package:base': backsolve, forwardsolve Saving _problems/test-diff-33.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 729 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-diff.R:33:5'): diff ────────────────────────────────────────── Expected `diff(x, 4, d = 4)` to equal `diff(as.spam(x), 4, d = 4)`. Differences: Attributes: < Modes: list, NULL > Attributes: < Lengths: 1, 0 > Attributes: < names for target but not for current > Attributes: < current is not list-like > [ FAIL 1 | WARN 0 | SKIP 0 | PASS 729 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 2.11-1
Check: tests
Result: ERROR Running 'demo_cholesky.R' [1s] Comparing 'demo_cholesky.Rout' to 'demo_cholesky.Rout.save' ... OK Running 'demo_jss10-example1.R' [2s] Comparing 'demo_jss10-example1.Rout' to 'demo_jss10-example1.Rout.save' ... OK Running 'demo_jss10-figures-table.R' [7s] Comparing 'demo_jss10-figures-table.Rout' to 'demo_jss10-figures-table.Rout.save' ... OK Running 'demo_jss15-BYM.R' [2s] Comparing 'demo_jss15-BYM.Rout' to 'demo_jss15-BYM.Rout.save' ... OK Running 'demo_jss15-Leroux.R' [3s] Comparing 'demo_jss15-Leroux.Rout' to 'demo_jss15-Leroux.Rout.save' ... OK Running 'demo_spam.R' [1s] Comparing 'demo_spam.Rout' to 'demo_spam.Rout.save' ... OK Running 'demo_timing.R' [3s] Comparing 'demo_timing.Rout' to 'demo_timing.Rout.save' ... OK Running 'jss_areal_counts.R' [2s] Comparing 'jss_areal_counts.Rout' to 'jss_areal_counts.Rout.save' ... OK Running 'testthat.R' [9s] Running the tests in 'tests/testthat.R' failed. Complete output: > # HEADER #################################################### > # This is file spam/tests/testthat.R. # > # It is part of the R package spam, # > # --> https://CRAN.R-project.org/package=spam # > # --> https://CRAN.R-project.org/package=spam64 # > # --> https://git.math.uzh.ch/reinhard.furrer/spam # > # by Reinhard Furrer [aut, cre], Florian Gerber [aut], # > # Roman Flury [aut], Daniel Gerber [ctb], # > # Kaspar Moesinger [ctb] # > # HEADER END ################################################ > > library("testthat") > # library("spam") > > test_check("spam") Loading required package: spam Spam version 2.11-1 (2025-01-20) is loaded. Type 'help( Spam)' or 'demo( spam)' for a short introduction and overview of this package. Help for individual functions is also obtained by adding the suffix '.spam' to the function name, e.g. 'help( chol.spam)'. Attaching package: 'spam' The following objects are masked from 'package:base': backsolve, forwardsolve Saving _problems/test-diff-33.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 729 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-diff.R:33:5'): diff ────────────────────────────────────────── Expected `diff(x, 4, d = 4)` to equal `diff(as.spam(x), 4, d = 4)`. Differences: Attributes: < Modes: list, NULL > Attributes: < Lengths: 1, 0 > Attributes: < names for target but not for current > Attributes: < current is not list-like > [ FAIL 1 | WARN 0 | SKIP 0 | PASS 729 ] Error: ! Test failures. Execution halted Flavor: r-devel-windows-x86_64

Version: 2.11-1
Check: installed package size
Result: NOTE installed size is 5.6Mb sub-directories of 1Mb or more: R 2.0Mb doc 1.3Mb libs 1.5Mb Flavor: r-oldrel-macos-x86_64