CRAN Package Check Results for Package shinyCohortBuilder

Last updated on 2026-07-04 05:51:21 CEST.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	0.4.0	6.26	70.13	76.39	OK
r-devel-linux-x86_64-debian-gcc	0.4.0	4.90	49.95	54.85	OK
r-devel-linux-x86_64-fedora-clang	0.4.0	14.00	161.19	175.19	ERROR
r-devel-linux-x86_64-fedora-gcc	0.4.0	11.00	191.54	202.54	OK
r-devel-windows-x86_64	0.4.0	9.00	88.00	97.00	OK
r-patched-linux-x86_64	0.4.0	7.77	63.36	71.13	OK
r-release-linux-x86_64	0.4.0				OK
r-release-macos-arm64	0.4.0	2.00	24.00	26.00	OK
r-release-macos-x86_64	0.4.0	5.00	96.00	101.00	OK
r-release-windows-x86_64	0.4.0	12.00	86.00	98.00	OK
r-oldrel-macos-arm64	0.4.0	2.00	23.00	25.00	OK
r-oldrel-macos-x86_64	0.4.0	6.00	217.00	223.00	OK
r-oldrel-windows-x86_64	0.4.0	12.00	107.00	119.00	OK

Check Details

Version: 0.4.0
Check: dependencies in R code
Result: NOTE Missing object imported by a ':::' call: ‘cohortBuilder:::get_filter_state’ Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.4.0
Check: examples
Result: ERROR Running examples in ‘shinyCohortBuilder-Ex.R’ failed The error most likely occurred in: > ### Name: autofilter > ### Title: Generate filters definition based on the Source data > ### Aliases: autofilter autofilter.default autofilter.tblist > > ### ** Examples > > library(magrittr) > library(cohortBuilder) Attaching package: ‘cohortBuilder’ The following object is masked from ‘package:shinyCohortBuilder’: autofilter The following objects are masked from ‘package:stats’: filter, step > library(shinyCohortBuilder) > > iris_source <- set_source(tblist(iris = iris)) %>% + autofilter() > iris_cohort <- cohort(iris_source) Error in `map()`: ℹ In index: 1. ℹ With name: iris-SepalLength. Caused by error: ! Can't get S7 properties with `$`. Did you mean `filter@gui`? Backtrace: ▆ 1. ├─cohortBuilder::cohort(iris_source) 2. │ └─Cohort$new(...) at cohortBuilder/R/cohort_methods.R:1297:3 3. │ └─cohortBuilder (local) initialize(...) 4. │ └─private$init_source(source, ...) at cohortBuilder/R/cohort_methods.R:47:9 5. │ └─cohortBuilder:::run_hooks(hook$post, self, private, ...) at cohortBuilder/R/cohort_methods.R:1266:7 6. │ └─shinyCohortBuilder (local) hook(...) at cohortBuilder/R/hooks.R:116:7 7. │ └─public$modify(...) 8. │ └─shinyCohortBuilder (local) modifier(self, private) at cohortBuilder/R/cohort_methods.R:1212:7 9. │ └─shinyCohortBuilder:::attach_filters_gui(private$steps[[step_id]]) 10. │ └─step$filters %>% purrr::modify(attach_filter_gui) 11. ├─purrr::modify(., attach_filter_gui) 12. │ └─purrr::map(vec_proxy(.x), .f, ...) 13. │ └─purrr:::map_("list", .x, .f, ..., .progress = .progress) 14. │ ├─purrr:::with_indexed_errors(...) 15. │ │ └─base::withCallingHandlers(...) 16. │ ├─purrr:::call_with_cleanup(...) 17. │ └─shinyCohortBuilder (local) .f(.x[[i]], ...) 18. │ ├─filter$gui 19. │ └─S7:::`$.S7_object`(filter, "gui") 20. │ └─base::stop(msg, call. = FALSE) 21. └─base::.handleSimpleError(...) 22. └─purrr (local) h(simpleError(msg, call)) 23. └─cli::cli_abort(...) 24. └─rlang::abort(...) Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.4.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘custom-gui-layer.Rmd’ using rmarkdown --- finished re-building ‘custom-gui-layer.Rmd’ --- re-building ‘gui-filter-layer.Rmd’ using rmarkdown Quitting from gui-filter-layer.Rmd:38-41 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `species_filter()`: ! could not find function "species_filter" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'gui-filter-layer.Rmd' failed with diagnostics: could not find function "species_filter" --- failed re-building ‘gui-filter-layer.Rmd’ --- re-building ‘package-options.Rmd’ using rmarkdown --- finished re-building ‘package-options.Rmd’ --- re-building ‘shinyCohortBuilder.Rmd’ using rmarkdown Quitting from shinyCohortBuilder.Rmd:199-205 [unnamed-chunk-4] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/purrr_error_indexed> Error in `map()`: ℹ In index: 1. ℹ With name: iris-SepalLength. Caused by error: ! Can't get S7 properties with `$`. Did you mean `filter@gui`? --- Backtrace: ▆ 1. ├─cohortBuilder::cohort(iris_source) 2. │ └─Cohort$new(...) at cohortBuilder/R/cohort_methods.R:1297:3 3. │ └─cohortBuilder (local) initialize(...) 4. │ └─private$init_source(source, ...) at cohortBuilder/R/cohort_methods.R:47:9 5. │ └─cohortBuilder:::run_hooks(hook$post, self, private, ...) at cohortBuilder/R/cohort_methods.R:1266:7 6. │ └─shinyCohortBuilder (local) hook(...) at cohortBuilder/R/hooks.R:116:7 7. │ └─public$modify(...) 8. │ └─shinyCohortBuilder (local) modifier(self, private) at cohortBuilder/R/cohort_methods.R:1212:7 9. │ └─shinyCohortBuilder:::attach_filters_gui(private$steps[[step_id]]) 10. │ └─step$filters %>% purrr::modify(attach_filter_gui) 11. └─purrr::modify(., attach_filter_gui) 12. └─purrr::map(vec_proxy(.x), .f, ...) 13. └─purrr:::map_("list", .x, .f, ..., .progress = .progress) 14. ├─purrr:::with_indexed_errors(...) 15. │ └─base::withCallingHandlers(...) 16. ├─purrr:::call_with_cleanup(...) 17. └─shinyCohortBuilder (local) .f(.x[[i]], ...) 18. ├─filter$gui 19. └─S7:::`$.S7_object`(filter, "gui") 20. └─base::stop(msg, call. = FALSE) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'shinyCohortBuilder.Rmd' failed with diagnostics: ℹ In index: 1. ℹ With name: iris-SepalLength. Caused by error: ! Can't get S7 properties with `$`. Did you mean `filter@gui`? --- failed re-building ‘shinyCohortBuilder.Rmd’ --- re-building ‘updating-source.Rmd’ using rmarkdown --- finished re-building ‘updating-source.Rmd’ SUMMARY: processing the following files failed: ‘gui-filter-layer.Rmd’ ‘shinyCohortBuilder.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang