CRAN Package Check Results for Maintainer ‘Rich FitzJohn <rich.fitzjohn at gmail.com>’

Last updated on 2024-08-16 21:49:36 CEST.

Package	ERROR	NOTE	OK
cinterpolate			13
cyphr			13
dde	1		12
diversitree		7	6
ids			13
jsonvalidate			13
odin			13
orderly			13
redux		3	10
ring			13
stevedore		10	3
storr		13
thor			13
TRAMPR			13
vaultr			13

Package cinterpolate

Current CRAN status: OK: 13

Additional issues

Strict

Package cyphr

Current CRAN status: OK: 13

Package dde

Current CRAN status: ERROR: 1, OK: 12

Additional issues

Strict

Version: 1.0.5
Check: tests
Result: ERROR Running ‘testthat.R’ [2s/4s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(dde) > > test_check("dde") using C compiler: ‘gcc-14 (Debian 14.2.0-1) 14.2.0’ make[1]: Entering directory '/tmp/RtmpRRZJiY/file1100712cd97d1e' make[1]: Leaving directory '/tmp/RtmpRRZJiY/file1100712cd97d1e' make[1]: Entering directory '/tmp/RtmpRRZJiY/file1100712cd97d1e' gcc-14 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -I/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/dde/include -g -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c logistic2.c -o logistic2.o logistic2.c: In function ‘logistic_finalize’: logistic2.c:9:7: error: implicit declaration of function ‘Free’; did you mean ‘free’? [-Wimplicit-function-declaration] 9 | Free(p); | ^~~~ | free logistic2.c: In function ‘logistic_init’: logistic2.c:17:26: error: implicit declaration of function ‘Calloc’; did you mean ‘calloc’? [-Wimplicit-function-declaration] 17 | double * p = (double*) Calloc(length(pars), double); | ^~~~~~ | calloc logistic2.c:17:47: error: expected expression before ‘double’ 17 | double * p = (double*) Calloc(length(pars), double); | ^~~~~~ make[1]: *** [/home/hornik/tmp/R.check/r-devel-gcc/Work/build/etc/Makeconf:195: logistic2.o] Error 1 make[1]: Leaving directory '/tmp/RtmpRRZJiY/file1100712cd97d1e' make[1]: Entering directory '/tmp/RtmpRRZJiY/file1100712cd97d1e' make[1]: Leaving directory '/tmp/RtmpRRZJiY/file1100712cd97d1e' Error in `FUN()`: ! In path: "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/dde.Rcheck/tests/testthat/helper-dde.R" Caused by error in `FUN()`: ! Error compiling source; see above for details Backtrace: ▆ 1. ├─testthat::test_check("dde") 2. │ └─testthat::test_dir(...) 3. │ └─testthat:::test_files(...) 4. │ └─testthat:::test_files_serial(...) 5. │ └─testthat:::test_files_setup_state(...) 6. │ └─testthat::source_test_helpers(".", env) 7. │ └─testthat::source_dir(path, "^helper.*\\.[rR]$", env = env, wrap = FALSE) 8. │ └─base::lapply(...) 9. │ └─testthat (local) FUN(X[[i]], ...) 10. │ └─testthat::source_file(path, env = env, chdir = chdir, wrap = wrap) 11. │ ├─base::withCallingHandlers(...) 12. │ └─base::eval(exprs, env) 13. │ └─base::eval(exprs, env) 14. │ ├─base::local(...) at tests/testthat/helper-dde.R:126:1 15. │ │ └─base::eval.parent(substitute(eval(quote(expr), envir))) 16. │ │ └─base::eval(expr, p) 17. │ │ └─base::eval(expr, p) 18. │ └─base::eval(...) 19. │ └─base::eval(...) 20. │ └─base::lapply(files, dde:::shlib, "dde_") at tests/testthat/helper-dde.R:129:3 21. │ └─dde (local) FUN(X[[i]], ...) 22. │ └─base::stop("Error compiling source; see above for details") 23. └─base::.handleSimpleError(...) 24. └─testthat (local) h(simpleError(msg, call)) 25. └─rlang::abort(...) Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Package diversitree

Current CRAN status: NOTE: 7, OK: 6

Additional issues

noRemap Strict

Version: 0.10-0
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: find.mle.Rd: subplex, ace, birthdeath Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Version: 0.10-0
Check: installed package size
Result: NOTE installed size is 7.9Mb sub-directories of 1Mb or more: libs 6.6Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package ids

Current CRAN status: OK: 13

Package jsonvalidate

Current CRAN status: OK: 13

Package odin

Current CRAN status: OK: 13

Package orderly

Current CRAN status: OK: 13

Package redux

Current CRAN status: NOTE: 3, OK: 10

Version: 1.1.4
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: storr_redis_api.Rd: storr Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Package ring

Current CRAN status: OK: 13

Additional issues

Strict

Package stevedore

Current CRAN status: NOTE: 10, OK: 3

Version: 0.9.6
Check: Rd files
Result: NOTE checkRd: (-1) docker_config_collection.Rd:11: Lost braces; missing escapes or markup? 11 | \Sexpr[results=rd,stage=render]{stevedore:::generate_help("config")} | ^ checkRd: (-1) docker_container.Rd:13: Lost braces 13 | \Sexpr[results=rd,stage=render]{stevedore:::generate_help("docker_container")} | ^ checkRd: (-1) docker_image_collection.Rd:11: Lost braces 11 | \Sexpr[results=rd,stage=render]{stevedore:::generate_help("image")} | ^ checkRd: (-1) docker_plugin_collection.Rd:11: Lost braces 11 | \Sexpr[results=rd,stage=render]{stevedore:::generate_help("plugin")} | ^ checkRd: (-1) docker_service_collection.Rd:11: Lost braces 11 | \Sexpr[results=rd,stage=render]{stevedore:::generate_help("service")} | ^ checkRd: (-1) docker_task.Rd:13: Lost braces 13 | \Sexpr[results=rd,stage=render]{stevedore:::generate_help("docker_task")} | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Package storr

Current CRAN status: NOTE: 13

Version: 1.2.5
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: storr.Rd: R6Class storr_dbi.Rd: digest storr_environment.Rd: digest storr_rds.Rd: digest Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Version: 1.2.5
Check: LazyData
Result: NOTE 'LazyData' is specified without a 'data' directory Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package thor

Current CRAN status: OK: 13

Additional issues

Strict

Package TRAMPR

Current CRAN status: OK: 13

Package vaultr

Current CRAN status: OK: 13