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CRAN Package Check Results for Package rSpectral

Last updated on 2026-05-11 17:54:56 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.0.14 79.48 46.96 126.44 ERROR
r-devel-linux-x86_64-debian-gcc 1.0.0.14 50.77 35.26 86.03 ERROR
r-devel-linux-x86_64-fedora-clang 1.0.0.14 111.00 68.99 179.99 ERROR
r-devel-linux-x86_64-fedora-gcc 1.0.0.14 162.00 72.05 234.05 ERROR
r-devel-windows-x86_64 1.0.0.14 92.00 85.00 177.00 ERROR
r-patched-linux-x86_64 1.0.0.14 72.00 42.16 114.16 ERROR
r-release-linux-x86_64 1.0.0.14 65.37 42.05 107.42 ERROR
r-release-macos-arm64 1.0.0.14 14.00 7.00 21.00 ERROR
r-release-macos-x86_64 1.0.0.14 42.00 36.00 78.00 ERROR
r-release-windows-x86_64 1.0.0.14 89.00 85.00 174.00 ERROR
r-oldrel-macos-arm64 1.0.0.14 11.00 8.00 19.00 OK
r-oldrel-macos-x86_64 1.0.0.14 42.00 42.00 84.00 OK
r-oldrel-windows-x86_64 1.0.0.14 104.00 100.00 204.00 ERROR

Additional issues

noSuggests

Check Details

Version: 1.0.0.14
Check: tests
Result: ERROR Running ‘testthat.R’ [3s/4s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(rSpectral) > > test_check("rSpectral") Loading required package: BiocGenerics Loading required package: generics Attaching package: 'generics' The following objects are masked from 'package:base': as.difftime, as.factor, as.ordered, intersect, is.element, setdiff, setequal, union Attaching package: 'BiocGenerics' The following objects are masked from 'package:stats': IQR, mad, sd, var, xtabs The following objects are masked from 'package:base': Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append, as.data.frame, basename, cbind, colnames, dirname, do.call, duplicated, eval, evalq, get, grep, grepl, is.unsorted, lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind, rownames, sapply, saveRDS, table, tapply, unique, unsplit, which.max, which.min This graph was created by an old(er) igraph version. i Call `igraph::upgrade_graph()` on it to use with the current igraph version. For now we convert it on the fly... Saving _problems/test-igraph-19.R Saving _problems/test-igraph-26.R [ FAIL 2 | WARN 4 | SKIP 0 | PASS 10 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-igraph.R:19:3'): membership fix_neig=0 is correct ──────────── Expected `c$modularity` to equal `exp_mod10`. Differences: `actual`: 0.432 `expected`: 0.408 ── Failure ('test-igraph.R:26:3'): membership fix_neig=1 is correct ──────────── Expected `c$modularity` to equal `exp_mod11`. Differences: `actual`: 0.3758 `expected`: 0.3776 [ FAIL 2 | WARN 4 | SKIP 0 | PASS 10 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.0.0.14
Check: tests
Result: ERROR Running ‘testthat.R’ [2s/3s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(rSpectral) > > test_check("rSpectral") Loading required package: BiocGenerics Loading required package: generics Attaching package: 'generics' The following objects are masked from 'package:base': as.difftime, as.factor, as.ordered, intersect, is.element, setdiff, setequal, union Attaching package: 'BiocGenerics' The following objects are masked from 'package:stats': IQR, mad, sd, var, xtabs The following objects are masked from 'package:base': Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append, as.data.frame, basename, cbind, colnames, dirname, do.call, duplicated, eval, evalq, get, grep, grepl, is.unsorted, lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind, rownames, sapply, saveRDS, table, tapply, unique, unsplit, which.max, which.min This graph was created by an old(er) igraph version. i Call `igraph::upgrade_graph()` on it to use with the current igraph version. For now we convert it on the fly... Saving _problems/test-igraph-19.R Saving _problems/test-igraph-26.R [ FAIL 2 | WARN 4 | SKIP 0 | PASS 10 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-igraph.R:19:3'): membership fix_neig=0 is correct ──────────── Expected `c$modularity` to equal `exp_mod10`. Differences: `actual`: 0.432 `expected`: 0.408 ── Failure ('test-igraph.R:26:3'): membership fix_neig=1 is correct ──────────── Expected `c$modularity` to equal `exp_mod11`. Differences: `actual`: 0.3758 `expected`: 0.3776 [ FAIL 2 | WARN 4 | SKIP 0 | PASS 10 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.0.0.14
Check: tests
Result: ERROR Running ‘testthat.R’ Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(rSpectral) > > test_check("rSpectral") Loading required package: BiocGenerics Loading required package: generics Attaching package: 'generics' The following objects are masked from 'package:base': as.difftime, as.factor, as.ordered, intersect, is.element, setdiff, setequal, union Attaching package: 'BiocGenerics' The following objects are masked from 'package:stats': IQR, mad, sd, var, xtabs The following objects are masked from 'package:base': Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append, as.data.frame, basename, cbind, colnames, dirname, do.call, duplicated, eval, evalq, get, grep, grepl, is.unsorted, lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind, rownames, sapply, saveRDS, table, tapply, unique, unsplit, which.max, which.min This graph was created by an old(er) igraph version. i Call `igraph::upgrade_graph()` on it to use with the current igraph version. For now we convert it on the fly... Saving _problems/test-igraph-19.R Saving _problems/test-igraph-26.R [ FAIL 2 | WARN 4 | SKIP 0 | PASS 10 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-igraph.R:19:3'): membership fix_neig=0 is correct ──────────── Expected `c$modularity` to equal `exp_mod10`. Differences: `actual`: 0.432 `expected`: 0.408 ── Failure ('test-igraph.R:26:3'): membership fix_neig=1 is correct ──────────── Expected `c$modularity` to equal `exp_mod11`. Differences: `actual`: 0.3758 `expected`: 0.3776 [ FAIL 2 | WARN 4 | SKIP 0 | PASS 10 ] Error: ! Test failures. Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.0.0.14
Check: tests
Result: ERROR Running 'testthat.R' [3s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(rSpectral) > > test_check("rSpectral") Loading required package: BiocGenerics Loading required package: generics Attaching package: 'generics' The following objects are masked from 'package:base': as.difftime, as.factor, as.ordered, intersect, is.element, setdiff, setequal, union Attaching package: 'BiocGenerics' The following objects are masked from 'package:stats': IQR, mad, sd, var, xtabs The following objects are masked from 'package:base': Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append, as.data.frame, basename, cbind, colnames, dirname, do.call, duplicated, eval, evalq, get, grep, grepl, is.unsorted, lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind, rownames, sapply, saveRDS, table, tapply, unique, unsplit, which.max, which.min This graph was created by an old(er) igraph version. i Call `igraph::upgrade_graph()` on it to use with the current igraph version. For now we convert it on the fly... Saving _problems/test-igraph-19.R Saving _problems/test-igraph-26.R [ FAIL 2 | WARN 4 | SKIP 0 | PASS 10 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-igraph.R:19:3'): membership fix_neig=0 is correct ──────────── Expected `c$modularity` to equal `exp_mod10`. Differences: `actual`: 0.432 `expected`: 0.408 ── Failure ('test-igraph.R:26:3'): membership fix_neig=1 is correct ──────────── Expected `c$modularity` to equal `exp_mod11`. Differences: `actual`: 0.3758 `expected`: 0.3776 [ FAIL 2 | WARN 4 | SKIP 0 | PASS 10 ] Error: ! Test failures. Execution halted Flavors: r-devel-windows-x86_64, r-oldrel-windows-x86_64

Version: 1.0.0.14
Check: tests
Result: ERROR Running ‘testthat.R’ [3s/3s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(rSpectral) > > test_check("rSpectral") Loading required package: BiocGenerics Loading required package: generics Attaching package: 'generics' The following objects are masked from 'package:base': as.difftime, as.factor, as.ordered, intersect, is.element, setdiff, setequal, union Attaching package: 'BiocGenerics' The following objects are masked from 'package:stats': IQR, mad, sd, var, xtabs The following objects are masked from 'package:base': Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append, as.data.frame, basename, cbind, colnames, dirname, do.call, duplicated, eval, evalq, get, grep, grepl, is.unsorted, lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind, rownames, sapply, saveRDS, table, tapply, unique, unsplit, which.max, which.min This graph was created by an old(er) igraph version. i Call `igraph::upgrade_graph()` on it to use with the current igraph version. For now we convert it on the fly... Saving _problems/test-igraph-19.R Saving _problems/test-igraph-26.R [ FAIL 2 | WARN 4 | SKIP 0 | PASS 10 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-igraph.R:19:3'): membership fix_neig=0 is correct ──────────── Expected `c$modularity` to equal `exp_mod10`. Differences: `actual`: 0.432 `expected`: 0.408 ── Failure ('test-igraph.R:26:3'): membership fix_neig=1 is correct ──────────── Expected `c$modularity` to equal `exp_mod11`. Differences: `actual`: 0.3758 `expected`: 0.3776 [ FAIL 2 | WARN 4 | SKIP 0 | PASS 10 ] Error: ! Test failures. Execution halted Flavors: r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.0.0.14
Check: tests
Result: ERROR Running ‘testthat.R’ [1s/1s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(rSpectral) > > test_check("rSpectral") Loading required package: BiocGenerics Loading required package: generics Attaching package: 'generics' The following objects are masked from 'package:base': as.difftime, as.factor, as.ordered, intersect, is.element, setdiff, setequal, union Attaching package: 'BiocGenerics' The following objects are masked from 'package:stats': IQR, mad, sd, var, xtabs The following objects are masked from 'package:base': Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append, as.data.frame, basename, cbind, colnames, dirname, do.call, duplicated, eval, evalq, get, grep, grepl, is.unsorted, lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind, rownames, sapply, saveRDS, table, tapply, unique, unsplit, which.max, which.min This graph was created by an old(er) igraph version. i Call `igraph::upgrade_graph()` on it to use with the current igraph version. For now we convert it on the fly... Saving _problems/test-igraph-19.R Saving _problems/test-igraph-26.R [ FAIL 2 | WARN 4 | SKIP 0 | PASS 10 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-igraph.R:19:3'): membership fix_neig=0 is correct ──────────── Expected `c$modularity` to equal `exp_mod10`. Differences: `actual`: 0.432 `expected`: 0.408 ── Failure ('test-igraph.R:26:3'): membership fix_neig=1 is correct ──────────── Expected `c$modularity` to equal `exp_mod11`. Differences: `actual`: 0.3758 `expected`: 0.3776 [ FAIL 2 | WARN 4 | SKIP 0 | PASS 10 ] Error: ! Test failures. Execution halted Flavor: r-release-macos-arm64

Version: 1.0.0.14
Check: tests
Result: ERROR Running ‘testthat.R’ [2s/2s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(rSpectral) > > test_check("rSpectral") Loading required package: BiocGenerics Loading required package: generics Attaching package: 'generics' The following objects are masked from 'package:base': as.difftime, as.factor, as.ordered, intersect, is.element, setdiff, setequal, union Attaching package: 'BiocGenerics' The following objects are masked from 'package:stats': IQR, mad, sd, var, xtabs The following objects are masked from 'package:base': Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append, as.data.frame, basename, cbind, colnames, dirname, do.call, duplicated, eval, evalq, get, grep, grepl, is.unsorted, lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind, rownames, sapply, saveRDS, table, tapply, unique, unsplit, which.max, which.min This graph was created by an old(er) igraph version. i Call `igraph::upgrade_graph()` on it to use with the current igraph version. For now we convert it on the fly... Saving _problems/test-igraph-19.R Saving _problems/test-igraph-26.R [ FAIL 2 | WARN 4 | SKIP 0 | PASS 10 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-igraph.R:19:3'): membership fix_neig=0 is correct ──────────── Expected `c$modularity` to equal `exp_mod10`. Differences: `actual`: 0.432 `expected`: 0.408 ── Failure ('test-igraph.R:26:3'): membership fix_neig=1 is correct ──────────── Expected `c$modularity` to equal `exp_mod11`. Differences: `actual`: 0.3758 `expected`: 0.3776 [ FAIL 2 | WARN 4 | SKIP 0 | PASS 10 ] Error: ! Test failures. Execution halted Flavor: r-release-macos-x86_64

Version: 1.0.0.14
Check: tests
Result: ERROR Running 'testthat.R' [2s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(rSpectral) > > test_check("rSpectral") Loading required package: BiocGenerics Loading required package: generics Attaching package: 'generics' The following objects are masked from 'package:base': as.difftime, as.factor, as.ordered, intersect, is.element, setdiff, setequal, union Attaching package: 'BiocGenerics' The following objects are masked from 'package:stats': IQR, mad, sd, var, xtabs The following objects are masked from 'package:base': Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append, as.data.frame, basename, cbind, colnames, dirname, do.call, duplicated, eval, evalq, get, grep, grepl, is.unsorted, lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind, rownames, sapply, saveRDS, table, tapply, unique, unsplit, which.max, which.min This graph was created by an old(er) igraph version. i Call `igraph::upgrade_graph()` on it to use with the current igraph version. For now we convert it on the fly... Saving _problems/test-igraph-19.R Saving _problems/test-igraph-26.R [ FAIL 2 | WARN 4 | SKIP 0 | PASS 10 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-igraph.R:19:3'): membership fix_neig=0 is correct ──────────── Expected `c$modularity` to equal `exp_mod10`. Differences: `actual`: 0.432 `expected`: 0.408 ── Failure ('test-igraph.R:26:3'): membership fix_neig=1 is correct ──────────── Expected `c$modularity` to equal `exp_mod11`. Differences: `actual`: 0.3758 `expected`: 0.3776 [ FAIL 2 | WARN 4 | SKIP 0 | PASS 10 ] Error: ! Test failures. Execution halted Flavor: r-release-windows-x86_64

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