The hardware and bandwidth for this mirror is donated by dogado GmbH, the Webhosting and Full Service-Cloud Provider. Check out our Wordpress Tutorial.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]dogado.de.
Last updated on 2026-08-13 11:51:21 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | OK | |||||
| r-devel-linux-x86_64-debian-gcc | 3.0.1 | 4.71 | 68.30 | 73.01 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 3.0.1 | 177.23 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 3.0.1 | 173.77 | OK | |||
| r-devel-windows-x86_64 | 3.0.1 | 11.00 | 325.00 | 336.00 | ERROR | |
| r-patched-linux-x86_64 | 3.0.1 | 8.08 | 261.30 | 269.38 | OK | |
| r-release-linux-x86_64 | 3.0.1 | 6.26 | 263.68 | 269.94 | OK | |
| r-release-macos-arm64 | 3.0.1 | 2.00 | 109.00 | 111.00 | OK | |
| r-release-macos-x86_64 | 3.0.1 | 5.00 | 310.00 | 315.00 | OK | |
| r-release-windows-x86_64 | 3.0.1 | 10.00 | 330.00 | 340.00 | OK | |
| r-oldrel-macos-arm64 | 3.0.1 | 2.00 | 102.00 | 104.00 | OK | |
| r-oldrel-macos-x86_64 | 3.0.1 | 5.00 | 279.00 | 284.00 | OK | |
| r-oldrel-windows-x86_64 | 3.0.1 | 13.00 | 411.00 | 424.00 | OK |
Version: 3.0.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘rPDBapi-structural-bioinformatics.Rmd’ using rmarkdown
Quitting from rPDBapi-structural-bioinformatics.Rmd:748-753 [fasta]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! No FASTA sequences were found for the entry ID '4O75'.
---
Backtrace:
▆
1. └─rPDBapi::get_fasta_from_rcsb_entry(selected_entry, verbosity = FALSE)
2. └─rPDBapi:::rpdbapi_abort(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'rPDBapi-structural-bioinformatics.Rmd' failed with diagnostics:
No FASTA sequences were found for the entry ID '4O75'.
--- failed re-building ‘rPDBapi-structural-bioinformatics.Rmd’
SUMMARY: processing the following file failed:
‘rPDBapi-structural-bioinformatics.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 3.0.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'rPDBapi-structural-bioinformatics.Rmd' using rmarkdown
Quitting from rPDBapi-structural-bioinformatics.Rmd:1471-1488 [fetch-contracts]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! Failed to fetch data from PDB. Error: ERROR: GraphQL query execution failed. Details: Request failed.
---
Backtrace:
▆
1. └─rPDBapi::data_fetcher(...)
2. └─base::tryCatch(...)
3. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
4. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
5. └─value[[3L]](cond)
6. └─rPDBapi:::rpdbapi_rethrow(...)
7. └─rPDBapi:::rpdbapi_abort(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'rPDBapi-structural-bioinformatics.Rmd' failed with diagnostics:
Failed to fetch data from PDB. Error: ERROR: GraphQL query execution failed. Details: Request failed.
--- failed re-building 'rPDBapi-structural-bioinformatics.Rmd'
SUMMARY: processing the following file failed:
'rPDBapi-structural-bioinformatics.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-windows-x86_64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.