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Last updated on 2026-08-10 10:50:39 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.3.13 | 6.82 | 195.88 | 202.70 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.3.13 | 5.38 | 136.15 | 141.53 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.3.13 | 138.52 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.3.13 | 139.07 | ERROR | |||
| r-devel-windows-x86_64 | 0.3.13 | 8.00 | 195.00 | 203.00 | ERROR | |
| r-patched-linux-x86_64 | 0.3.13 | 6.04 | 181.16 | 187.20 | ERROR | |
| r-release-linux-x86_64 | 0.3.13 | 6.33 | 181.68 | 188.01 | ERROR | |
| r-release-macos-arm64 | 0.3.13 | 2.00 | 55.00 | 57.00 | OK | |
| r-release-macos-x86_64 | 0.3.13 | 5.00 | 242.00 | 247.00 | OK | |
| r-release-windows-x86_64 | 0.3.13 | 9.00 | 196.00 | 205.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.3.13 | 2.00 | 55.00 | 57.00 | OK | |
| r-oldrel-macos-x86_64 | 0.3.13 | 5.00 | 190.00 | 195.00 | OK | |
| r-oldrel-windows-x86_64 | 0.3.13 | 11.00 | 266.00 | 277.00 | ERROR |
Version: 0.3.13
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/115s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> suppressPackageStartupMessages(library(testthat))
> suppressPackageStartupMessages(library(pulsar))
>
> testthat::test_check("pulsar")
Saving _problems/test_pulsar-23.R
Saving _problems/test_pulsar-25.R
Saving _problems/test_pulsar-38.R
Saving _problems/test_pulsar-41.R
[ FAIL 4 | WARN 8 | SKIP 0 | PASS 304 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_pulsar.R:22:1'): weird lambda path results in correct error or warning ──
Error in `.huge_default_lambda(S, d, nlambda, lambda.min.ratio, lambda)`: lambda must be non-increasing for method = "mb" or "glasso"; tied values are allowed.
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::.try_mclapply(...)
8. ├─base::withCallingHandlers(...)
9. └─parallel::mclapply(X, FUN, mc.cores = 1L, ...)
10. └─base::lapply(X = X, FUN = FUN, ...)
11. └─pulsar (local) FUN(X[[i]], ...)
12. ├─base::do.call(fun, c(fargs, list(data[ind.sample, ])))
13. └─huge (local) `<fn>`(verbose = FALSE, scr = TRUE, lambda = `<dbl>`, `<dbl[,15]>`)
14. └─huge::huge.mb(...)
15. └─huge:::.huge_default_lambda(...)
── Error ('test_pulsar.R:24:1'): weird lambda path results in correct error or warning ──
Error in `.huge_default_lambda(S, d, nlambda, lambda.min.ratio, lambda)`: lambda must be non-increasing for method = "mb" or "glasso"; tied values are allowed.
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::.try_mclapply(...)
8. ├─base::withCallingHandlers(...)
9. └─parallel::mclapply(X, FUN, mc.cores = 1L, ...)
10. └─base::lapply(X = X, FUN = FUN, ...)
11. └─pulsar (local) FUN(X[[i]], ...)
12. ├─base::do.call(fun, c(fargs, list(data[ind.sample, ])))
13. └─huge (local) `<fn>`(verbose = FALSE, scr = TRUE, lambda = `<dbl>`, `<dbl[,15]>`)
14. └─huge::huge.mb(...)
15. └─huge:::.huge_default_lambda(...)
── Error ('test_pulsar.R:36:1'): weird lambda path results in correct error or warning ──
<subscriptOutOfBoundsError/error/condition>
Error in `est$merge[[i]]`: subscript out of bounds
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::stars.stability(NULL, thresh, rep.num, p, starsmerge)
── Error ('test_pulsar.R:39:1'): weird lambda path results in correct error or warning ──
Error: Job with id 1 not terminated
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─batchtools::loadResult(id = 1, reg = reg)
8. └─batchtools:::stopf("Job with id %i not terminated", id$job.id)
[ FAIL 4 | WARN 8 | SKIP 0 | PASS 304 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.3.13
Check: tests
Result: ERROR
Running ‘testthat.R’ [55s/79s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> suppressPackageStartupMessages(library(testthat))
> suppressPackageStartupMessages(library(pulsar))
>
> testthat::test_check("pulsar")
Saving _problems/test_pulsar-23.R
Saving _problems/test_pulsar-25.R
Saving _problems/test_pulsar-38.R
Saving _problems/test_pulsar-41.R
[ FAIL 4 | WARN 8 | SKIP 0 | PASS 304 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_pulsar.R:22:1'): weird lambda path results in correct error or warning ──
Error in `.huge_default_lambda(S, d, nlambda, lambda.min.ratio, lambda)`: lambda must be non-increasing for method = "mb" or "glasso"; tied values are allowed.
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::.try_mclapply(...)
8. ├─base::withCallingHandlers(...)
9. └─parallel::mclapply(X, FUN, mc.cores = 1L, ...)
10. └─base::lapply(X = X, FUN = FUN, ...)
11. └─pulsar (local) FUN(X[[i]], ...)
12. ├─base::do.call(fun, c(fargs, list(data[ind.sample, ])))
13. └─huge (local) `<fn>`(verbose = FALSE, scr = TRUE, lambda = `<dbl>`, `<dbl[,15]>`)
14. └─huge::huge.mb(...)
15. └─huge:::.huge_default_lambda(...)
── Error ('test_pulsar.R:24:1'): weird lambda path results in correct error or warning ──
Error in `.huge_default_lambda(S, d, nlambda, lambda.min.ratio, lambda)`: lambda must be non-increasing for method = "mb" or "glasso"; tied values are allowed.
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::.try_mclapply(...)
8. ├─base::withCallingHandlers(...)
9. └─parallel::mclapply(X, FUN, mc.cores = 1L, ...)
10. └─base::lapply(X = X, FUN = FUN, ...)
11. └─pulsar (local) FUN(X[[i]], ...)
12. ├─base::do.call(fun, c(fargs, list(data[ind.sample, ])))
13. └─huge (local) `<fn>`(verbose = FALSE, scr = TRUE, lambda = `<dbl>`, `<dbl[,15]>`)
14. └─huge::huge.mb(...)
15. └─huge:::.huge_default_lambda(...)
── Error ('test_pulsar.R:36:1'): weird lambda path results in correct error or warning ──
<subscriptOutOfBoundsError/error/condition>
Error in `est$merge[[i]]`: subscript out of bounds
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::stars.stability(NULL, thresh, rep.num, p, starsmerge)
── Error ('test_pulsar.R:39:1'): weird lambda path results in correct error or warning ──
Error: Job with id 1 not terminated
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─batchtools::loadResult(id = 1, reg = reg)
8. └─batchtools:::stopf("Job with id %i not terminated", id$job.id)
[ FAIL 4 | WARN 8 | SKIP 0 | PASS 304 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.3.13
Check: tests
Result: ERROR
Running ‘testthat.R’ [59s/69s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> suppressPackageStartupMessages(library(testthat))
> suppressPackageStartupMessages(library(pulsar))
>
> testthat::test_check("pulsar")
Saving _problems/test_pulsar-23.R
Saving _problems/test_pulsar-25.R
Saving _problems/test_pulsar-38.R
Saving _problems/test_pulsar-41.R
[ FAIL 4 | WARN 8 | SKIP 0 | PASS 304 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_pulsar.R:22:1'): weird lambda path results in correct error or warning ──
Error in `.huge_default_lambda(S, d, nlambda, lambda.min.ratio, lambda)`: lambda must be non-increasing for method = "mb" or "glasso"; tied values are allowed.
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::.try_mclapply(...)
8. ├─base::withCallingHandlers(...)
9. └─parallel::mclapply(X, FUN, mc.cores = 1L, ...)
10. └─base::lapply(X = X, FUN = FUN, ...)
11. └─pulsar (local) FUN(X[[i]], ...)
12. ├─base::do.call(fun, c(fargs, list(data[ind.sample, ])))
13. └─huge (local) `<fn>`(verbose = FALSE, scr = TRUE, lambda = `<dbl>`, `<dbl[,15]>`)
14. └─huge::huge.mb(...)
15. └─huge:::.huge_default_lambda(...)
── Error ('test_pulsar.R:24:1'): weird lambda path results in correct error or warning ──
Error in `.huge_default_lambda(S, d, nlambda, lambda.min.ratio, lambda)`: lambda must be non-increasing for method = "mb" or "glasso"; tied values are allowed.
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::.try_mclapply(...)
8. ├─base::withCallingHandlers(...)
9. └─parallel::mclapply(X, FUN, mc.cores = 1L, ...)
10. └─base::lapply(X = X, FUN = FUN, ...)
11. └─pulsar (local) FUN(X[[i]], ...)
12. ├─base::do.call(fun, c(fargs, list(data[ind.sample, ])))
13. └─huge (local) `<fn>`(verbose = FALSE, scr = TRUE, lambda = `<dbl>`, `<dbl[,15]>`)
14. └─huge::huge.mb(...)
15. └─huge:::.huge_default_lambda(...)
── Error ('test_pulsar.R:36:1'): weird lambda path results in correct error or warning ──
<subscriptOutOfBoundsError/error/condition>
Error in `est$merge[[i]]`: subscript out of bounds
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::stars.stability(NULL, thresh, rep.num, p, starsmerge)
── Error ('test_pulsar.R:39:1'): weird lambda path results in correct error or warning ──
Error: Job with id 1 not terminated
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─batchtools::loadResult(id = 1, reg = reg)
8. └─batchtools:::stopf("Job with id %i not terminated", id$job.id)
[ FAIL 4 | WARN 8 | SKIP 0 | PASS 304 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.3.13
Check: tests
Result: ERROR
Running ‘testthat.R’ [56s/67s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> suppressPackageStartupMessages(library(testthat))
> suppressPackageStartupMessages(library(pulsar))
>
> testthat::test_check("pulsar")
Saving _problems/test_pulsar-23.R
Saving _problems/test_pulsar-25.R
Saving _problems/test_pulsar-38.R
Saving _problems/test_pulsar-41.R
[ FAIL 4 | WARN 8 | SKIP 0 | PASS 304 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_pulsar.R:22:1'): weird lambda path results in correct error or warning ──
Error in `.huge_default_lambda(S, d, nlambda, lambda.min.ratio, lambda)`: lambda must be non-increasing for method = "mb" or "glasso"; tied values are allowed.
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::.try_mclapply(...)
8. ├─base::withCallingHandlers(...)
9. └─parallel::mclapply(X, FUN, mc.cores = 1L, ...)
10. └─base::lapply(X = X, FUN = FUN, ...)
11. └─pulsar (local) FUN(X[[i]], ...)
12. ├─base::do.call(fun, c(fargs, list(data[ind.sample, ])))
13. └─huge (local) `<fn>`(verbose = FALSE, scr = TRUE, lambda = `<dbl>`, `<dbl[,15]>`)
14. └─huge::huge.mb(...)
15. └─huge:::.huge_default_lambda(...)
── Error ('test_pulsar.R:24:1'): weird lambda path results in correct error or warning ──
Error in `.huge_default_lambda(S, d, nlambda, lambda.min.ratio, lambda)`: lambda must be non-increasing for method = "mb" or "glasso"; tied values are allowed.
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::.try_mclapply(...)
8. ├─base::withCallingHandlers(...)
9. └─parallel::mclapply(X, FUN, mc.cores = 1L, ...)
10. └─base::lapply(X = X, FUN = FUN, ...)
11. └─pulsar (local) FUN(X[[i]], ...)
12. ├─base::do.call(fun, c(fargs, list(data[ind.sample, ])))
13. └─huge (local) `<fn>`(verbose = FALSE, scr = TRUE, lambda = `<dbl>`, `<dbl[,15]>`)
14. └─huge::huge.mb(...)
15. └─huge:::.huge_default_lambda(...)
── Error ('test_pulsar.R:36:1'): weird lambda path results in correct error or warning ──
<subscriptOutOfBoundsError/error/condition>
Error in `est$merge[[i]]`: subscript out of bounds
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::stars.stability(NULL, thresh, rep.num, p, starsmerge)
── Error ('test_pulsar.R:39:1'): weird lambda path results in correct error or warning ──
Error: Job with id 1 not terminated
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─batchtools::loadResult(id = 1, reg = reg)
8. └─batchtools:::stopf("Job with id %i not terminated", id$job.id)
[ FAIL 4 | WARN 8 | SKIP 0 | PASS 304 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.3.13
Check: tests
Result: ERROR
Running 'testthat.R' [72s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> suppressPackageStartupMessages(library(testthat))
> suppressPackageStartupMessages(library(pulsar))
>
> testthat::test_check("pulsar")
Saving _problems/test_pulsar-23.R
Saving _problems/test_pulsar-25.R
Saving _problems/test_pulsar-38.R
Saving _problems/test_pulsar-41.R
[ FAIL 4 | WARN 8 | SKIP 0 | PASS 304 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_pulsar.R:22:1'): weird lambda path results in correct error or warning ──
Error in `.huge_default_lambda(S, d, nlambda, lambda.min.ratio, lambda)`: lambda must be non-increasing for method = "mb" or "glasso"; tied values are allowed.
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::.try_mclapply(...)
8. ├─base::withCallingHandlers(...)
9. └─parallel::mclapply(X, FUN, mc.cores = 1L, ...)
10. └─base::lapply(X, FUN, ...)
11. └─pulsar (local) FUN(X[[i]], ...)
12. ├─base::do.call(fun, c(fargs, list(data[ind.sample, ])))
13. └─huge (local) `<fn>`(verbose = FALSE, scr = TRUE, lambda = `<dbl>`, `<dbl[,15]>`)
14. └─huge::huge.mb(...)
15. └─huge:::.huge_default_lambda(...)
── Error ('test_pulsar.R:24:1'): weird lambda path results in correct error or warning ──
Error in `.huge_default_lambda(S, d, nlambda, lambda.min.ratio, lambda)`: lambda must be non-increasing for method = "mb" or "glasso"; tied values are allowed.
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::.try_mclapply(...)
8. ├─base::withCallingHandlers(...)
9. └─parallel::mclapply(X, FUN, mc.cores = 1L, ...)
10. └─base::lapply(X, FUN, ...)
11. └─pulsar (local) FUN(X[[i]], ...)
12. ├─base::do.call(fun, c(fargs, list(data[ind.sample, ])))
13. └─huge (local) `<fn>`(verbose = FALSE, scr = TRUE, lambda = `<dbl>`, `<dbl[,15]>`)
14. └─huge::huge.mb(...)
15. └─huge:::.huge_default_lambda(...)
── Error ('test_pulsar.R:36:1'): weird lambda path results in correct error or warning ──
<subscriptOutOfBoundsError/error/condition>
Error in `est$merge[[i]]`: subscript out of bounds
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::stars.stability(NULL, thresh, rep.num, p, starsmerge)
── Error ('test_pulsar.R:39:1'): weird lambda path results in correct error or warning ──
Error: Job with id 1 not terminated
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─batchtools::loadResult(id = 1, reg = reg)
8. └─batchtools:::stopf("Job with id %i not terminated", id$job.id)
[ FAIL 4 | WARN 8 | SKIP 0 | PASS 304 ]
Error:
! Test failures.
Execution halted
Flavors: r-devel-windows-x86_64, r-release-windows-x86_64
Version: 0.3.13
Check: tests
Result: ERROR
Running ‘testthat.R’ [76s/120s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> suppressPackageStartupMessages(library(testthat))
> suppressPackageStartupMessages(library(pulsar))
>
> testthat::test_check("pulsar")
Saving _problems/test_pulsar-23.R
Saving _problems/test_pulsar-25.R
Saving _problems/test_pulsar-38.R
Saving _problems/test_pulsar-41.R
[ FAIL 4 | WARN 8 | SKIP 0 | PASS 304 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_pulsar.R:22:1'): weird lambda path results in correct error or warning ──
Error in `.huge_default_lambda(S, d, nlambda, lambda.min.ratio, lambda)`: lambda must be non-increasing for method = "mb" or "glasso"; tied values are allowed.
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::.try_mclapply(...)
8. ├─base::withCallingHandlers(...)
9. └─parallel::mclapply(X, FUN, mc.cores = 1L, ...)
10. └─base::lapply(X = X, FUN = FUN, ...)
11. └─pulsar (local) FUN(X[[i]], ...)
12. ├─base::do.call(fun, c(fargs, list(data[ind.sample, ])))
13. └─huge (local) `<fn>`(verbose = FALSE, scr = TRUE, lambda = `<dbl>`, `<dbl[,15]>`)
14. └─huge::huge.mb(...)
15. └─huge:::.huge_default_lambda(...)
── Error ('test_pulsar.R:24:1'): weird lambda path results in correct error or warning ──
Error in `.huge_default_lambda(S, d, nlambda, lambda.min.ratio, lambda)`: lambda must be non-increasing for method = "mb" or "glasso"; tied values are allowed.
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::.try_mclapply(...)
8. ├─base::withCallingHandlers(...)
9. └─parallel::mclapply(X, FUN, mc.cores = 1L, ...)
10. └─base::lapply(X = X, FUN = FUN, ...)
11. └─pulsar (local) FUN(X[[i]], ...)
12. ├─base::do.call(fun, c(fargs, list(data[ind.sample, ])))
13. └─huge (local) `<fn>`(verbose = FALSE, scr = TRUE, lambda = `<dbl>`, `<dbl[,15]>`)
14. └─huge::huge.mb(...)
15. └─huge:::.huge_default_lambda(...)
── Error ('test_pulsar.R:36:1'): weird lambda path results in correct error or warning ──
<subscriptOutOfBoundsError/error/condition>
Error in `est$merge[[i]]`: subscript out of bounds
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::stars.stability(NULL, thresh, rep.num, p, starsmerge)
── Error ('test_pulsar.R:39:1'): weird lambda path results in correct error or warning ──
Error: Job with id 1 not terminated
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─batchtools::loadResult(id = 1, reg = reg)
8. └─batchtools:::stopf("Job with id %i not terminated", id$job.id)
[ FAIL 4 | WARN 8 | SKIP 0 | PASS 304 ]
Error:
! Test failures.
Execution halted
Flavor: r-patched-linux-x86_64
Version: 0.3.13
Check: tests
Result: ERROR
Running ‘testthat.R’ [76s/106s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> suppressPackageStartupMessages(library(testthat))
> suppressPackageStartupMessages(library(pulsar))
>
> testthat::test_check("pulsar")
Saving _problems/test_pulsar-23.R
Saving _problems/test_pulsar-25.R
Saving _problems/test_pulsar-38.R
Saving _problems/test_pulsar-41.R
[ FAIL 4 | WARN 8 | SKIP 0 | PASS 304 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_pulsar.R:22:1'): weird lambda path results in correct error or warning ──
Error in `.huge_default_lambda(S, d, nlambda, lambda.min.ratio, lambda)`: lambda must be non-increasing for method = "mb" or "glasso"; tied values are allowed.
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::.try_mclapply(...)
8. ├─base::withCallingHandlers(...)
9. └─parallel::mclapply(X, FUN, mc.cores = 1L, ...)
10. └─base::lapply(X = X, FUN = FUN, ...)
11. └─pulsar (local) FUN(X[[i]], ...)
12. ├─base::do.call(fun, c(fargs, list(data[ind.sample, ])))
13. └─huge (local) `<fn>`(verbose = FALSE, scr = TRUE, lambda = `<dbl>`, `<dbl[,15]>`)
14. └─huge::huge.mb(...)
15. └─huge:::.huge_default_lambda(...)
── Error ('test_pulsar.R:24:1'): weird lambda path results in correct error or warning ──
Error in `.huge_default_lambda(S, d, nlambda, lambda.min.ratio, lambda)`: lambda must be non-increasing for method = "mb" or "glasso"; tied values are allowed.
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::.try_mclapply(...)
8. ├─base::withCallingHandlers(...)
9. └─parallel::mclapply(X, FUN, mc.cores = 1L, ...)
10. └─base::lapply(X = X, FUN = FUN, ...)
11. └─pulsar (local) FUN(X[[i]], ...)
12. ├─base::do.call(fun, c(fargs, list(data[ind.sample, ])))
13. └─huge (local) `<fn>`(verbose = FALSE, scr = TRUE, lambda = `<dbl>`, `<dbl[,15]>`)
14. └─huge::huge.mb(...)
15. └─huge:::.huge_default_lambda(...)
── Error ('test_pulsar.R:36:1'): weird lambda path results in correct error or warning ──
<subscriptOutOfBoundsError/error/condition>
Error in `est$merge[[i]]`: subscript out of bounds
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::stars.stability(NULL, thresh, rep.num, p, starsmerge)
── Error ('test_pulsar.R:39:1'): weird lambda path results in correct error or warning ──
Error: Job with id 1 not terminated
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─batchtools::loadResult(id = 1, reg = reg)
8. └─batchtools:::stopf("Job with id %i not terminated", id$job.id)
[ FAIL 4 | WARN 8 | SKIP 0 | PASS 304 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-linux-x86_64
Version: 0.3.13
Check: tests
Result: ERROR
Running 'testthat.R' [106s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> suppressPackageStartupMessages(library(testthat))
> suppressPackageStartupMessages(library(pulsar))
>
> testthat::test_check("pulsar")
Saving _problems/test_pulsar-23.R
Saving _problems/test_pulsar-25.R
Saving _problems/test_pulsar-38.R
Saving _problems/test_pulsar-41.R
[ FAIL 4 | WARN 8 | SKIP 0 | PASS 304 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_pulsar.R:22:1'): weird lambda path results in correct error or warning ──
Error in `.huge_default_lambda(S, d, nlambda, lambda.min.ratio, lambda)`: lambda must be non-increasing for method = "mb" or "glasso"; tied values are allowed.
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::.try_mclapply(...)
8. ├─base::withCallingHandlers(...)
9. └─parallel::mclapply(X, FUN, mc.cores = 1L, ...)
10. └─base::lapply(X, FUN, ...)
11. └─pulsar (local) FUN(X[[i]], ...)
12. ├─base::do.call(fun, c(fargs, list(data[ind.sample, ])))
13. └─huge (local) `<fn>`(verbose = FALSE, scr = TRUE, lambda = `<dbl>`, `<dbl[,15]>`)
14. └─huge::huge.mb(...)
15. └─huge:::.huge_default_lambda(...)
── Error ('test_pulsar.R:24:1'): weird lambda path results in correct error or warning ──
Error in `.huge_default_lambda(S, d, nlambda, lambda.min.ratio, lambda)`: lambda must be non-increasing for method = "mb" or "glasso"; tied values are allowed.
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::.try_mclapply(...)
8. ├─base::withCallingHandlers(...)
9. └─parallel::mclapply(X, FUN, mc.cores = 1L, ...)
10. └─base::lapply(X, FUN, ...)
11. └─pulsar (local) FUN(X[[i]], ...)
12. ├─base::do.call(fun, c(fargs, list(data[ind.sample, ])))
13. └─huge (local) `<fn>`(verbose = FALSE, scr = TRUE, lambda = `<dbl>`, `<dbl[,15]>`)
14. └─huge::huge.mb(...)
15. └─huge:::.huge_default_lambda(...)
── Error ('test_pulsar.R:36:1'): weird lambda path results in correct error or warning ──
<subscriptOutOfBoundsError/error/condition>
Error in `est$merge[[i]]`: subscript out of bounds
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─pulsar:::stars.stability(NULL, thresh, rep.num, p, starsmerge)
── Error ('test_pulsar.R:39:1'): weird lambda path results in correct error or warning ──
Error: Job with id 1 not terminated
Backtrace:
▆
1. ├─testthat::expect_warning(...)
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─pulsar (local) pfun(dat$data, fun = fun, fargs = hargs, rep.num = 3, ...)
7. └─batchtools::loadResult(id = 1, reg = reg)
8. └─batchtools:::stopf("Job with id %i not terminated", id$job.id)
[ FAIL 4 | WARN 8 | SKIP 0 | PASS 304 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-windows-x86_64
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