CRAN Package Check Results for Package ptable

Last updated on 2025-02-23 15:49:54 CET.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	1.0.0	6.88	91.05	97.93	OK
r-devel-linux-x86_64-debian-gcc	1.0.0	4.69	57.83	62.52	OK
r-devel-linux-x86_64-fedora-clang	1.0.0			95.46	ERROR
r-devel-linux-x86_64-fedora-gcc	1.0.0			107.09	ERROR
r-devel-macos-arm64	1.0.0			48.00	OK
r-devel-macos-x86_64	1.0.0			85.00	OK
r-devel-windows-x86_64	1.0.0	9.00	89.00	98.00	OK
r-patched-linux-x86_64	1.0.0	4.21	75.81	80.02	OK
r-release-linux-x86_64	1.0.0	5.93	73.92	79.85	OK
r-release-macos-arm64	1.0.0			47.00	OK
r-release-macos-x86_64	1.0.0			68.00	OK
r-release-windows-x86_64	1.0.0	9.00	89.00	98.00	OK
r-oldrel-macos-arm64	1.0.0			46.00	OK
r-oldrel-macos-x86_64	1.0.0			81.00	OK
r-oldrel-windows-x86_64	1.0.0	10.00	104.00	114.00	OK

Check Details

Version: 1.0.0
Check: examples
Result: ERROR Running examples in ‘ptable-Ex.R’ failed The error most likely occurred in: > ### Name: modify_cnt_ptable > ### Title: Modify a ptable suitable for frequency count variables > ### Aliases: modify_cnt_ptable modify_cnts_ptable > > ### ** Examples > > # Original ptable > ptab <- create_cnt_ptable(3, 1) Error: nlopt_add_equality_mconstraint returned NLOPT_INVALID_ARGS. Error: The ptable can't be calculated without a violation of the constraints. The combination of the input parameters you set (e.g. D=3, V=1, js=0 or pstay) doesn't work. Please try another specification: either change the arguments 'mono=' or 'optim=' or try to use a different combination of input parameters (hint: changing the variance is sufficient in most cases). Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.0.0
Check: tests
Result: ERROR Running ‘testthat.R’ Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(ptable) Attaching package: 'ptable' The following object is masked from 'package:graphics': plot The following object is masked from 'package:base': plot > > test_check("ptable") Error: nlopt_add_equality_mconstraint returned NLOPT_INVALID_ARGS. Error: nlopt_add_equality_mconstraint returned NLOPT_INVALID_ARGS. Ignoring argument `step` for freqency tables Ignoring argument `step` for freqency tables Error: nlopt_add_equality_mconstraint returned NLOPT_INVALID_ARGS. Ignoring argument `step` for freqency tables Ignoring argument `step` for freqency tables Ignoring argument `step` for freqency tables Ignoring argument `step` for freqency tables Ignoring argument `step` for freqency tables Row 2: original frequency i = 1 ------------------------------- j1 01234 j2 01234 v -10123 i_char 1 j_char 01234 v_char -10123 i 1 j 01234 p_init 00000 p_lb 0.000000010.000000010.000000010.000000010.00000001 p_ub 11111 pstay 000 epsilon 0.00000001 Error: nlopt_add_equality_mconstraint returned NLOPT_INVALID_ARGS. p_new:11111 $p_mean [,1] [1,] 5 $p_var [,1] [1,] 15 $p_sum [1] 5 $p_stay [1] 1 Variable 1 - Iter 1 check_var: TRUE check_pstay: TRUE p_lb for p_stay: 0.00000001 Sum of p: 0 Error: nlopt_add_equality_mconstraint returned NLOPT_INVALID_ARGS. Error: nlopt_add_equality_mconstraint returned NLOPT_INVALID_ARGS. Error: nlopt_add_equality_mconstraint returned NLOPT_INVALID_ARGS. Error: nlopt_add_equality_mconstraint returned NLOPT_INVALID_ARGS. There are 11 consecutive intervals with identical noise. You can try another 'seed' or proceed. At least, check whether the modified ptable has sufficiently rearranged sub-intervals. NOTE for Tau-Argus: Please use a new Tau-Argus Release (>= 4.2.3). Error: nlopt_add_equality_mconstraint returned NLOPT_INVALID_ARGS. Error: nlopt_add_equality_mconstraint returned NLOPT_INVALID_ARGS. Error: nlopt_add_equality_mconstraint returned NLOPT_INVALID_ARGS. Error: nlopt_add_equality_mconstraint returned NLOPT_INVALID_ARGS. [ FAIL 9 | WARN 0 | SKIP 0 | PASS 32 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-examples.R:10:3'): Example is correct ────────────────────────── Error: The ptable can't be calculated without a violation of the constraints. The combination of the input parameters you set (e.g. D=2, V=1.05, js=1 or pstay) doesn't work. Please try another specification: either change the arguments 'mono=' or 'optim=' or try to use a different combination of input parameters (hint: changing the variance is sufficient in most cases). Backtrace: ▆ 1. ├─testthat::expect_equal(...) at test-examples.R:10:3 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object") 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─ptable::pt_ex_cnts() 5. └─ptable::create_cnt_ptable(...) 6. └─ptable::create_ptable(...) 7. └─ptable:::pt_create_pTable(...) ── Error ('test-functions.R:2:1'): (code run outside of `test_that()`) ───────── Error: The ptable can't be calculated without a violation of the constraints. The combination of the input parameters you set (e.g. D=3, V=1, js=0 or pstay) doesn't work. Please try another specification: either change the arguments 'mono=' or 'optim=' or try to use a different combination of input parameters (hint: changing the variance is sufficient in most cases). Backtrace: ▆ 1. └─ptable::create_cnt_ptable(D = 3, V = 1) at test-functions.R:2:1 2. └─ptable::create_ptable(...) 3. └─ptable:::pt_create_pTable(...) ── Failure ('test-params.R:117:3'): pt_create_pTable() is ok ─────────────────── Expected `pt_create_pTable(params = para1, debugging = TRUE, monitoring = TRUE)` to run without any errors. i Actually got a <simpleError> with text: The ptable can't be calculated without a violation of the constraints. The combination of the input parameters you set (e.g. D=3, V=1, js=0 or pstay) doesn't work. Please try another specification: either change the arguments 'mono=' or 'optim=' or try to use a different combination of input parameters (hint: changing the variance is sufficient in most cases). ── Failure ('test-params.R:148:3'): modify_cnt_ptable() is ok ────────────────── Expected `modify_cnt_ptable(...)` to run without any errors. i Actually got a <simpleError> with text: The ptable can't be calculated without a violation of the constraints. The combination of the input parameters you set (e.g. D=3, V=1, js=0 or pstay) doesn't work. Please try another specification: either change the arguments 'mono=' or 'optim=' or try to use a different combination of input parameters (hint: changing the variance is sufficient in most cases). ── Failure ('test-params.R:153:3'): modify_cnt_ptable() is ok ────────────────── Expected `modify_cnt_ptable(...)` to run without any errors. i Actually got a <simpleError> with text: The ptable can't be calculated without a violation of the constraints. The combination of the input parameters you set (e.g. D=3, V=1, js=0 or pstay) doesn't work. Please try another specification: either change the arguments 'mono=' or 'optim=' or try to use a different combination of input parameters (hint: changing the variance is sufficient in most cases). ── Error ('test-params.R:162:3'): modify_cnt_ptable() is ok ──────────────────── Error: The ptable can't be calculated without a violation of the constraints. The combination of the input parameters you set (e.g. D=3, V=1, js=0 or pstay) doesn't work. Please try another specification: either change the arguments 'mono=' or 'optim=' or try to use a different combination of input parameters (hint: changing the variance is sufficient in most cases). Backtrace: ▆ 1. ├─testthat::expect_message(...) at test-params.R:162:3 2. │ └─testthat:::expect_condition_matching(...) 3. │ └─testthat:::quasi_capture(...) 4. │ ├─testthat (local) .capture(...) 5. │ │ └─base::withCallingHandlers(...) 6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 7. ├─ptable::modify_cnt_ptable(pt_create_pTable(para1), 0.3, seed = 5467) 8. └─ptable:::pt_create_pTable(para1) ── Failure ('test-params.R:168:3'): Testing different optim settings ─────────── Expected `create_cnt_ptable(D = 3, V = 1, optim = 2)` to run without any errors. i Actually got a <simpleError> with text: The ptable can't be calculated without a violation of the constraints. The combination of the input parameters you set (e.g. D=3, V=1, js=0 or pstay) doesn't work. Please try another specification: either change the arguments 'mono=' or 'optim=' or try to use a different combination of input parameters (hint: changing the variance is sufficient in most cases). ── Failure ('test-params.R:169:3'): Testing different optim settings ─────────── Expected `create_cnt_ptable(D = 3, V = 1, optim = 3)` to run without any errors. i Actually got a <simpleError> with text: The ptable can't be calculated without a violation of the constraints. The combination of the input parameters you set (e.g. D=3, V=1, js=0 or pstay) doesn't work. Please try another specification: either change the arguments 'mono=' or 'optim=' or try to use a different combination of input parameters (hint: changing the variance is sufficient in most cases). ── Failure ('test-params.R:192:13'): Testing if only ptable_params-class is generated and imported again ── Expected `create_ptable(params = para2)` to run without any errors. i Actually got a <simpleError> with text: The ptable can't be calculated without a violation of the constraints. The combination of the input parameters you set (e.g. D=3, V=1, js=0 or pstay) doesn't work. Please try another specification: either change the arguments 'mono=' or 'optim=' or try to use a different combination of input parameters (hint: changing the variance is sufficient in most cases). [ FAIL 9 | WARN 0 | SKIP 0 | PASS 32 ] Error: Test failures Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.0.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘introduction.Rmd’ using rmarkdown Quitting from lines 78-81 [unnamed-chunk-4] (introduction.Rmd) Error: processing vignette 'introduction.Rmd' failed with diagnostics: The ptable can't be calculated without a violation of the constraints. The combination of the input parameters you set (e.g. D=2, V=1, js=0 or pstay) doesn't work. Please try another specification: either change the arguments 'mono=' or 'optim=' or try to use a different combination of input parameters (hint: changing the variance is sufficient in most cases). --- failed re-building ‘introduction.Rmd’ SUMMARY: processing the following file failed: ‘introduction.Rmd’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc