CRAN Package Check Results for Package proteus

Last updated on 2025-03-19 12:51:40 CET.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	1.1.4	17.45	140.87	158.32	OK
r-devel-linux-x86_64-debian-gcc	1.1.4	15.73	3913.51	3929.24	ERROR
r-devel-linux-x86_64-fedora-clang	1.1.4			254.74	OK
r-devel-linux-x86_64-fedora-gcc	1.1.4			240.63	OK
r-devel-macos-arm64	1.1.4			68.00	OK
r-devel-macos-x86_64	1.1.4			271.00	OK
r-devel-windows-x86_64	1.1.4	20.00	133.00	153.00	OK
r-patched-linux-x86_64	1.1.4	21.75	1906.71	1928.46	ERROR
r-release-linux-x86_64	1.1.4	18.82	129.16	147.98	OK
r-release-macos-arm64	1.1.4			65.00	OK
r-release-macos-x86_64	1.1.4			96.00	OK
r-release-windows-x86_64	1.1.4	21.00	132.00	153.00	OK
r-oldrel-macos-arm64	1.1.4				OK
r-oldrel-macos-x86_64	1.1.4			164.00	OK
r-oldrel-windows-x86_64	1.1.4	27.00	166.00	193.00	OK

Check Details

Version: 1.1.4
Check: tests
Result: ERROR Running ‘testthat.R’ [63m/54m] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(proteus) > > test_check("proteus") block 1 581 sequence for training 561 sequence for testing epoch: 3 Train loss: 0.3198812 Test loss: 0.3303558 epoch: 6 Train loss: 0.3277235 Test loss: 0.3321903 epoch: 9 Train loss: 0.3309349 Test loss: 0.3357758 epoch: 12 Train loss: 0.331967 Test loss: 0.3308378 epoch: 15 Train loss: 0.3345608 Test loss: 0.3331805 epoch: 18 Train loss: 0.3234839 Test loss: 0.3307465 epoch: 21 Train loss: 0.3325789 Test loss: 0.3249392 early stop at epoch: 23 Train loss: 0.3616703 Test loss: 0.3380815 block 2 1142 sequence for training 561 sequence for testing epoch: 3 Train loss: 0.3347947 Test loss: 0.3327095 epoch: 6 Train loss: 0.3286071 Test loss: 0.3336559 epoch: 9 Train loss: 0.3289495 Test loss: 0.3284454 epoch: 12 Train loss: 0.3417596 Test loss: 0.3351029 early stop at epoch: 12 Train loss: 0.4641147 Test loss: 0.3343924 final training on all 3 1703 sequence for training epoch: 3 Train loss: 0.3341904 epoch: 6 Train loss: 0.3344039 epoch: 9 Train loss: 0.3277193 epoch: 12 Train loss: 0.330785 epoch: 15 Train loss: 0.332111 epoch: 18 Train loss: 0.3288006 epoch: 21 Train loss: 0.3293977 epoch: 24 Train loss: 0.3310112 epoch: 27 Train loss: 0.3331797 epoch: 30 Train loss: 0.3361475 variational model based on normal latent distribution with 144 tensors and 8190 parameters proteus: 1065.66 sec elapsed date and value gaps filled with kalman imputation block 1 801 sequence for training 801 sequence for testing epoch: 3 Train loss: 0.3272795 Test loss: 0.3308806 epoch: 6 Train loss: 0.3294848 Test loss: 0.3300329 epoch: 9 Train loss: 0.3265669 Test loss: 0.3289861 early stop at epoch: 10 Train loss: 0.3411736 Test loss: 0.3280828 block 2 1602 sequence for training 801 sequence for testing epoch: 3 Train loss: 0.3119311 Test loss: 0.3236771 epoch: 6 Train loss: 0.3116652 Test loss: 0.3250794 epoch: 9 Train loss: 0.3145806 Test loss: 0.3261671 epoch: 12 Train loss: 0.3121014 Test loss: 0.3234109 early stop at epoch: 14 Train loss: 0.3086948 Test loss: 0.3303865 final training on all 3 2403 sequence for training epoch: 3 Train loss: 0.3306837 epoch: 6 Train loss: 0.32861 epoch: 9 Train loss: 0.3302987 epoch: 12 Train loss: 0.3308404 epoch: 15 Train loss: 0.3316363 epoch: 18 Train loss: 0.3305584 epoch: 21 Train loss: 0.3296561 epoch: 24 Train loss: 0.3288558 epoch: 27 Train loss: 0.3285954 epoch: 30 Train loss: 0.3292858 variational model based on normal latent distribution with 144 tensors and 60670 parameters proteus: 2182.874 sec elapsed [ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-main.R:44:13'): Correct outcome format and size for base outcome3 ── Error: 'workers >= 1' is not TRUE Backtrace: ▆ 1. └─proteus::proteus_random_search(...) at test-main.R:44:13 2. └─future::plan(...) 3. └─future (local) plan_set(newStack, skip = .skip, cleanup = .cleanup, init = .init) 4. └─future (local) plan_init() 5. └─future (local) evaluator(NA, label = "future-plan-test", globals = FALSE, lazy = FALSE) 6. └─future (local) strategy(..., workers = workers, envir = envir) 7. └─future:::stop_if_not(...) 8. └─future:::stopf(...) [ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.1.4
Check: tests
Result: ERROR Running ‘testthat.R’ [29m/44m] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(proteus) > > test_check("proteus") block 1 581 sequence for training 561 sequence for testing epoch: 3 Train loss: 0.3189062 Test loss: 0.3267635 epoch: 6 Train loss: 0.3257136 Test loss: 0.3305856 epoch: 9 Train loss: 0.3281975 Test loss: 0.3326654 epoch: 12 Train loss: 0.3283336 Test loss: 0.3282004 epoch: 15 Train loss: 0.3296001 Test loss: 0.330804 early stop at epoch: 17 Train loss: 0.3524422 Test loss: 0.3440138 block 2 1142 sequence for training 561 sequence for testing epoch: 3 Train loss: 0.3350843 Test loss: 0.3327911 epoch: 6 Train loss: 0.3289235 Test loss: 0.3344327 epoch: 9 Train loss: 0.3287825 Test loss: 0.3271678 epoch: 12 Train loss: 0.3400375 Test loss: 0.33457 early stop at epoch: 12 Train loss: 0.4641148 Test loss: 0.3343982 final training on all 3 1703 sequence for training epoch: 3 Train loss: 0.33419 epoch: 6 Train loss: 0.3344037 epoch: 9 Train loss: 0.3277188 epoch: 12 Train loss: 0.3307849 epoch: 15 Train loss: 0.3321109 epoch: 18 Train loss: 0.3288007 epoch: 21 Train loss: 0.3293982 epoch: 24 Train loss: 0.3310115 epoch: 27 Train loss: 0.3331793 epoch: 30 Train loss: 0.3361465 variational model based on normal latent distribution with 144 tensors and 8190 parameters proteus: 844.426 sec elapsed date and value gaps filled with kalman imputation block 1 801 sequence for training 801 sequence for testing epoch: 3 Train loss: 0.3267256 Test loss: 0.3312688 epoch: 6 Train loss: 0.3297968 Test loss: 0.3292607 epoch: 9 Train loss: 0.3252338 Test loss: 0.3297491 epoch: 12 Train loss: 0.3306013 Test loss: 0.3303258 epoch: 15 Train loss: 0.3251774 Test loss: 0.328252 epoch: 18 Train loss: 0.3272535 Test loss: 0.3313462 epoch: 21 Train loss: 0.3273559 Test loss: 0.3294696 epoch: 24 Train loss: 0.3278645 Test loss: 0.33049 epoch: 27 Train loss: 0.3271287 Test loss: 0.3311102 epoch: 30 Train loss: 0.3286056 Test loss: 0.3277574 block 2 1602 sequence for training 801 sequence for testing epoch: 3 Train loss: 0.3265325 Test loss: 0.3306953 epoch: 6 Train loss: 0.3268972 Test loss: 0.330749 epoch: 9 Train loss: 0.3294754 Test loss: 0.3329546 epoch: 12 Train loss: 0.3279948 Test loss: 0.3302276 epoch: 15 Train loss: 0.3272423 Test loss: 0.3335027 early stop at epoch: 15 Train loss: 0.3190955 Test loss: 0.3357933 final training on all 3 2403 sequence for training epoch: 3 Train loss: 0.3306837 epoch: 6 Train loss: 0.3286098 epoch: 9 Train loss: 0.3302987 epoch: 12 Train loss: 0.3308404 epoch: 15 Train loss: 0.3316363 epoch: 18 Train loss: 0.3305579 epoch: 21 Train loss: 0.3296561 epoch: 24 Train loss: 0.3288558 epoch: 27 Train loss: 0.3285954 epoch: 30 Train loss: 0.3292858 variational model based on normal latent distribution with 144 tensors and 60670 parameters proteus: 1762.408 sec elapsed [ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-main.R:44:13'): Correct outcome format and size for base outcome3 ── Error: 'workers >= 1' is not TRUE Backtrace: ▆ 1. └─proteus::proteus_random_search(...) at test-main.R:44:13 2. └─future::plan(...) 3. └─future (local) plan_set(newStack, skip = .skip, cleanup = .cleanup, init = .init) 4. └─future (local) plan_init() 5. └─future (local) evaluator(NA, label = "future-plan-test", globals = FALSE, lazy = FALSE) 6. └─future (local) strategy(..., workers = workers, envir = envir) 7. └─future:::stop_if_not(...) 8. └─future:::stopf(...) [ FAIL 1 | WARN 13747 | SKIP 0 | PASS 24 ] Error: Test failures Execution halted Flavor: r-patched-linux-x86_64