CRAN Package Check Results for Package parameters

Last updated on 2025-12-28 01:48:46 CET.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	0.28.3	31.45	422.04	453.49	OK
r-devel-linux-x86_64-debian-gcc	0.28.3	18.86	282.95	301.81	OK
r-devel-linux-x86_64-fedora-clang	0.28.3	51.00	652.57	703.57	OK
r-devel-linux-x86_64-fedora-gcc	0.28.3	54.00	717.00	771.00	OK
r-devel-windows-x86_64	0.28.3	32.00	336.00	368.00	ERROR
r-patched-linux-x86_64	0.28.3	36.56	392.44	429.00	OK
r-release-linux-x86_64	0.28.3	28.29	383.73	412.02	OK
r-release-macos-arm64	0.28.3	8.00	105.00	113.00	OK
r-release-macos-x86_64	0.28.3	24.00	515.00	539.00	OK
r-release-windows-x86_64	0.28.3	29.00	323.00	352.00	OK
r-oldrel-macos-arm64	0.28.3	9.00	101.00	110.00	NOTE
r-oldrel-macos-x86_64	0.28.3	26.00	801.00	827.00	OK
r-oldrel-windows-x86_64	0.28.3	44.00	424.00	468.00	NOTE

Check Details

Version: 0.28.3
Check: tests
Result: ERROR Running 'testthat.R' [75s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(parameters) > library(testthat) > > test_check("parameters") Starting 2 test processes. > test-include_reference.R: Your model may suffer from singularity (see `?lme4::isSingular` and > test-include_reference.R: `?performance::check_singularity`). > test-include_reference.R: Some of the confidence intervals of the random effects parameters are > test-include_reference.R: probably not meaningful! > test-include_reference.R: You may try to impose a prior on the random effects parameters, e.g. > test-include_reference.R: using the glmmTMB package. > test-include_reference.R: Your model may suffer from singularity (see `?lme4::isSingular` and > test-include_reference.R: `?performance::check_singularity`). > test-include_reference.R: Some of the confidence intervals of the random effects parameters are > test-include_reference.R: probably not meaningful! > test-include_reference.R: You may try to impose a prior on the random effects parameters, e.g. > test-include_reference.R: using the glmmTMB package. > test-model_parameters.afex_aov.R: Contrasts set to contr.sum for the following variables: condition, talk > test-model_parameters.afex_aov.R: Contrasts set to contr.sum for the following variables: condition, talk > test-model_parameters.afex_aov.R: Contrasts set to contr.sum for the following variables: treatment, gender Saving _problems/test-marginaleffects-11.R Saving _problems/test-marginaleffects-94.R Saving _problems/test-marginaleffects-130.R Saving _problems/test-marginaleffects-153.R > test-n_factors.R: [1] "# Method Agreement Procedure:" > test-n_factors.R: [2] "" > test-n_factors.R: [3] "The choice of 1 dimensions is supported by 11 (84.62%) methods out of 13 (Bartlett, Anderson, Lawley, Optimal coordinates, Acceleration factor, Parallel analysis, Kaiser criterion, Scree (SE), Scree (R2), VSS complexity 1, Velicer's MAP)." > test-n_factors.R: [1] "# Method Agreement Procedure:" > test-n_factors.R: [2] "" > test-n_factors.R: [3] "The choice of 1 dimensions is supported by 3 (60.00%) methods out of 5 (Velicer's MAP, BIC, BIC (adjusted))." [ FAIL 4 | WARN 0 | SKIP 130 | PASS 714 ] ══ Skipped tests (130) ═════════════════════════════════════════════════════════ • On CRAN (125): 'test-GLMMadaptive.R:1:1', 'test-Hmisc.R:1:1', 'test-averaging.R:1:1', 'test-backticks.R:1:1', 'test-bootstrap_emmeans.R:1:1', 'test-bootstrap_parameters.R:1:1', 'test-brms.R:1:1', 'test-compare_parameters.R:90:5', 'test-compare_parameters.R:95:5', 'test-complete_separation.R:4:1', 'test-complete_separation.R:18:1', 'test-complete_separation.R:28:1', 'test-coxph.R:69:1', 'test-efa.R:1:1', 'test-emmGrid-df_colname.R:1:1', 'test-equivalence_test.R:3:1', 'test-equivalence_test.R:13:1', 'test-equivalence_test.R:22:3', 'test-equivalence_test.R:112:3', 'test-factor_analysis.R:2:3', 'test-factor_analysis.R:124:3', 'test-format_model_parameters2.R:2:3', 'test-gam.R:30:1', 'test-get_scores.R:1:1', 'test-glmer.R:1:1', 'test-glmmTMB-2.R:1:1', 'test-glmmTMB-profile_CI.R:2:3', 'test-glmmTMB.R:1:1', 'test-group_level_total.R:2:1', 'test-helper.R:1:1', 'test-ivreg.R:45:1', 'test-lcmm.R:1:1', 'test-lmerTest.R:1:1', 'test-include_reference.R:4:1', 'test-include_reference.R:62:1', 'test-include_reference.R:110:1', 'test-mipo.R:5:1', 'test-mipo.R:23:1', 'test-mmrm.R:1:1', 'test-model_parameters.BFBayesFactor.R:4:3', 'test-model_parameters.BFBayesFactor.R:77:3', 'test-model_parameters.BFBayesFactor.R:114:3', 'test-model_parameters.anova.R:1:1', 'test-model_parameters.aov.R:1:1', 'test-marginaleffects.R:170:1', 'test-marginaleffects.R:199:3', 'test-model_parameters.bracl.R:1:1', 'test-model_parameters.cgam.R:1:1', 'test-model_parameters.coxme.R:1:1', 'test-model_parameters.aov_es_ci.R:183:3', 'test-model_parameters.aov_es_ci.R:294:3', 'test-model_parameters.aov_es_ci.R:344:3', 'test-model_parameters.aov_es_ci.R:397:3', 'test-model_parameters.epi2x2.R:1:1', 'test-model_parameters.efa_cfa.R:30:3', 'test-model_parameters.fixest_multi.R:1:1', 'test-model_parameters.fixest.R:2:3', 'test-model_parameters.fixest.R:77:3', 'test-model_parameters.fixest.R:145:1', 'test-model_parameters.glmgee.R:1:1', 'test-model_parameters.glm.R:35:1', 'test-model_parameters.glm.R:67:1', 'test-model_parameters.logistf.R:1:1', 'test-model_parameters.logitr.R:1:1', 'test-model_parameters.mclogit.R:1:1', 'test-model_parameters.mediate.R:1:1', 'test-model_parameters.mixed.R:2:1', 'test-model_parameters.nnet.R:5:1', 'test-model_parameters.vgam.R:3:1', 'test-model_parameters_df.R:1:1', 'test-model_parameters_ordinal.R:1:1', 'test-model_parameters_random_pars.R:1:1', 'test-model_parameters_std.R:1:1', 'test-model_parameters_std_mixed.R:1:1', 'test-n_factors.R:10:3', 'test-n_factors.R:26:3', 'test-n_factors.R:76:3', 'test-p_adjust.R:1:1', 'test-p_direction.R:1:1', 'test-p_significance.R:1:1', 'test-p_value.R:14:1', 'test-panelr.R:1:1', 'test-pipe.R:1:1', 'test-pca.R:64:1', 'test-polr.R:1:1', 'test-plm.R:97:1', 'test-posterior.R:1:1', 'test-pool_parameters.R:1:1', 'test-pool_parameters.R:32:1', 'test-print_AER_labels.R:5:1', 'test-printing-stan.R:1:1', 'test-printing.R:1:1', 'test-pretty_names.R:40:1', 'test-pretty_names.R:73:5', 'test-quantreg.R:1:1', 'test-random_effects_ci-glmmTMB.R:3:1', 'test-random_effects_ci.R:1:1', 'test-printing2.R:14:5', 'test-printing2.R:21:5', 'test-printing2.R:26:5', 'test-printing2.R:31:5', 'test-printing2.R:36:5', 'test-printing2.R:48:5', 'test-printing2.R:91:7', 'test-printing2.R:126:5', 'test-rstanarm.R:2:1', 'test-robust.R:1:1', 'test-sampleSelection.R:2:1', 'test-simulate_model.R:19:1', 'test-simulate_parameters.R:18:1', 'test-serp.R:5:1', 'test-svylme.R:1:1', 'test-svyolr.R:1:1', 'test-visualisation_recipe.R:1:1', 'test-weightit.R:6:1', 'test-weightit.R:26:1', 'test-wrs2.R:55:1', 'test-standardize_parameters.R:28:1', 'test-standardize_parameters.R:36:3', 'test-standardize_parameters.R:61:3', 'test-standardize_parameters.R:173:3', 'test-standardize_parameters.R:297:3', 'test-standardize_parameters.R:332:3', 'test-standardize_parameters.R:425:3', 'test-standardize_parameters.R:515:3' • TODO: check this test locally, fails on CI, probably due to scoping issues? (1): 'test-marginaleffects.R:280:3' • TODO: fix this test (1): 'test-model_parameters.lqmm.R:40:3' • TODO: this one actually is not correct. (1): 'test-model_parameters_robust.R:127:3' • empty test (2): 'test-wrs2.R:69:1', 'test-wrs2.R:81:1' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-marginaleffects.R:7:3'): marginaleffects() ───────────────────── Error in ``[.data.table`(out, , `:=`(tmp_idx, seq_len(.N)), by = tmp)`: attempt access index 10/10 in VECTOR_ELT Backtrace: ▆ 1. └─marginaleffects::comparisons(...) 2. ├─base::do.call("get_comparisons", args) 3. └─marginaleffects:::get_comparisons(...) 4. ├─out[, `:=`(tmp_idx, seq_len(.N)), by = tmp] 5. └─data.table:::`[.data.table`(...) ── Error ('test-marginaleffects.R:90:3'): comparisons() ──────────────────────── Error in ``[.data.table`(out, , `:=`(tmp_idx, seq_len(.N)), by = tmp)`: attempt access index 10/10 in VECTOR_ELT Backtrace: ▆ 1. └─marginaleffects::comparisons(...) 2. ├─base::do.call("get_comparisons", args) 3. └─marginaleffects:::get_comparisons(...) 4. ├─out[, `:=`(tmp_idx, seq_len(.N)), by = tmp] 5. └─data.table:::`[.data.table`(...) ── Error ('test-marginaleffects.R:127:3'): slopes() ──────────────────────────── Error in ``[.data.table`(out, , `:=`(tmp_idx, seq_len(.N)), by = tmp)`: attempt access index 10/10 in VECTOR_ELT Backtrace: ▆ 1. └─marginaleffects::comparisons(...) 2. ├─base::do.call("get_comparisons", args) 3. └─marginaleffects:::get_comparisons(...) 4. ├─out[, `:=`(tmp_idx, seq_len(.N)), by = tmp] 5. └─data.table:::`[.data.table`(...) ── Error ('test-marginaleffects.R:148:3'): multiple contrasts: Issue #779 ────── Error in ``[.data.table`(out, , `:=`(tmp_idx, seq_len(.N)), by = tmp)`: attempt access index 13/13 in VECTOR_ELT Backtrace: ▆ 1. ├─base::suppressWarnings(...) at test-marginaleffects.R:148:3 2. │ └─base::withCallingHandlers(...) 3. └─marginaleffects::comparisons(...) 4. ├─base::do.call("get_comparisons", args) 5. └─marginaleffects:::get_comparisons(...) 6. ├─out[, `:=`(tmp_idx, seq_len(.N)), by = tmp] 7. └─data.table:::`[.data.table`(...) [ FAIL 4 | WARN 0 | SKIP 130 | PASS 714 ] Error: ! Test failures. Execution halted Flavor: r-devel-windows-x86_64

Version: 0.28.3
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘M3C’ Flavor: r-oldrel-macos-arm64

Version: 0.28.3
Check: package dependencies
Result: NOTE Package suggested but not available for checking: 'EGAnet' Flavor: r-oldrel-windows-x86_64