CRAN Package Check Results for Package pam

Last updated on 2026-02-11 19:53:17 CET.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	2.0.0				OK
r-devel-linux-x86_64-debian-gcc	2.0.0	2.11	63.29	65.40	OK
r-devel-linux-x86_64-fedora-clang	2.0.0			121.80	OK
r-devel-linux-x86_64-fedora-gcc	2.0.0	5.00	111.95	116.95	OK
r-devel-macos-arm64	2.0.0	1.00	20.00	21.00	OK
r-devel-windows-x86_64	2.0.0	6.00	108.00	114.00	ERROR
r-patched-linux-x86_64	2.0.0	3.37	84.55	87.92	OK
r-release-linux-x86_64	2.0.0	2.72	84.38	87.10	OK
r-release-macos-arm64	2.0.0	1.00	20.00	21.00	OK
r-release-macos-x86_64	2.0.0	2.00	67.00	69.00	OK
r-release-windows-x86_64	2.0.0	5.00	110.00	115.00	OK
r-oldrel-macos-arm64	2.0.0	1.00	25.00	26.00	OK
r-oldrel-macos-x86_64	2.0.0	2.00	74.00	76.00	OK
r-oldrel-windows-x86_64	2.0.0	7.00	137.00	144.00	OK

Check Details

Version: 2.0.0
Check: tests
Result: ERROR Running 'testthat.R' [48s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(pam) > > test_check("pam") v Created directory: 'results'. eilers peeters: failed to calculate pm: warning: simpleWarning in sqrt(a * c): NaNs produced eilers peeters: failed to calculate ik: warning: simpleWarning in sqrt(a * c): NaNs produced eilers peeters: failed to calculate im: warning: simpleWarning in sqrt(c/a): NaNs produced eilers peeters: failed to calculate w: warning: simpleWarning in sqrt(a * c): NaNs produced platt: failed to calculate im: warning: simpleWarning in log((alpha + beta)/beta): NaNs produced eilers peeters: failed to calculate pm: warning: simpleWarning in sqrt(a * c): NaNs produced eilers peeters: failed to calculate ik: warning: simpleWarning in sqrt(a * c): NaNs produced eilers peeters: failed to calculate im: warning: simpleWarning in sqrt(c/a): NaNs produced eilers peeters: failed to calculate w: warning: simpleWarning in sqrt(a * c): NaNs produced platt: failed to calculate im: warning: simpleWarning in log((alpha + beta)/beta): NaNs produced platt: failed to calculate im: warning: simpleWarning in log((alpha + beta)/beta): NaNs produced skipped file: 20231123_07.csv because of error: Error in doTryCatch(return(expr), name, parentenv, handler): failed to calculate residual_sum_of_squares with eilers_peeters platt: failed to calculate im: warning: simpleWarning in log((alpha + beta)/beta): NaNs produced skipped file: 20231214_09.csv because of error: Error in doTryCatch(return(expr), name, parentenv, handler): failed to calculate residual_sum_of_squares with eilers_peeters skipped file: 20231214_10.csv because of error: Error in doTryCatch(return(expr), name, parentenv, handler): failed to calculate residual_sum_of_squares with eilers_peeters eilers peeters: failed to calculate pm: warning: simpleWarning in sqrt(a * c): NaNs produced eilers peeters: failed to calculate ik: warning: simpleWarning in sqrt(a * c): NaNs produced eilers peeters: failed to calculate im: warning: simpleWarning in sqrt(c/a): NaNs produced eilers peeters: failed to calculate w: warning: simpleWarning in sqrt(a * c): NaNs produced platt: failed to calculate im: warning: simpleWarning in log((alpha + beta)/beta): NaNs produced skipped file: 20231214_13.csv because of error: Error in doTryCatch(return(expr), name, parentenv, handler): failed to calculate residual_sum_of_squares with eilers_peeters eilers peeters: failed to calculate pm: warning: simpleWarning in sqrt(a * c): NaNs produced eilers peeters: failed to calculate ik: warning: simpleWarning in sqrt(a * c): NaNs produced eilers peeters: failed to calculate im: warning: simpleWarning in sqrt(c/a): NaNs produced eilers peeters: failed to calculate w: warning: simpleWarning in sqrt(a * c): NaNs produced platt: failed to calculate im: warning: simpleWarning in log((alpha + beta)/beta): NaNs produced eilers peeters: failed to calculate pm: warning: simpleWarning in sqrt(a * c): NaNs produced eilers peeters: failed to calculate ik: warning: simpleWarning in sqrt(a * c): NaNs produced eilers peeters: failed to calculate im: warning: simpleWarning in sqrt(c/a): NaNs produced eilers peeters: failed to calculate w: warning: simpleWarning in sqrt(a * c): NaNs produced platt: failed to calculate im: warning: simpleWarning in log((alpha + beta)/beta): NaNs produced platt: failed to calculate im: warning: simpleWarning in log((alpha + beta)/beta): NaNs produced skipped file: 20231214_12.csv because of error: Error in value[[3L]](cond): error while calculating vollenweider model: Error in nlsModel(formula, mf, start, wts): singular gradient matrix at initial parameter estimates skipped file: 20231214_15.csv because of error: Error in value[[3L]](cond): error while calculating vollenweider model: Error in nlsModel(formula, mf, start, wts): singular gradient matrix at initial parameter estimates Saving _problems/test-compare_regression_models_etr_II-21.R Saving _problems/test-compare_regression_models_etr_II-22.R eilers peeters: failed to calculate pm: warning: simpleWarning in sqrt(a * c): NaNs produced eilers peeters: failed to calculate ik: warning: simpleWarning in sqrt(a * c): NaNs produced eilers peeters: failed to calculate im: warning: simpleWarning in sqrt(c/a): NaNs produced eilers peeters: failed to calculate w: warning: simpleWarning in sqrt(a * c): NaNs produced platt: failed to calculate im: warning: simpleWarning in log((alpha + beta)/beta): NaNs produced eilers peeters: failed to calculate pm: warning: simpleWarning in sqrt(a * c): NaNs produced eilers peeters: failed to calculate ik: warning: simpleWarning in sqrt(a * c): NaNs produced eilers peeters: failed to calculate im: warning: simpleWarning in sqrt(c/a): NaNs produced eilers peeters: failed to calculate w: warning: simpleWarning in sqrt(a * c): NaNs produced platt: failed to calculate im: warning: simpleWarning in log((alpha + beta)/beta): NaNs produced platt: failed to calculate im: warning: simpleWarning in log((alpha + beta)/beta): NaNs produced skipped file: 20231123_07.csv because of error: Error in doTryCatch(return(expr), name, parentenv, handler): failed to calculate residual_sum_of_squares with eilers_peeters platt: failed to calculate im: warning: simpleWarning in log((alpha + beta)/beta): NaNs produced skipped file: 20231214_09.csv because of error: Error in doTryCatch(return(expr), name, parentenv, handler): failed to calculate residual_sum_of_squares with eilers_peeters skipped file: 20231214_10.csv because of error: Error in doTryCatch(return(expr), name, parentenv, handler): failed to calculate residual_sum_of_squares with eilers_peeters eilers peeters: failed to calculate pm: warning: simpleWarning in sqrt(a * c): NaNs produced eilers peeters: failed to calculate ik: warning: simpleWarning in sqrt(a * c): NaNs produced eilers peeters: failed to calculate im: warning: simpleWarning in sqrt(c/a): NaNs produced eilers peeters: failed to calculate w: warning: simpleWarning in sqrt(a * c): NaNs produced platt: failed to calculate im: warning: simpleWarning in log((alpha + beta)/beta): NaNs produced skipped file: 20231214_13.csv because of error: Error in doTryCatch(return(expr), name, parentenv, handler): failed to calculate residual_sum_of_squares with eilers_peeters eilers peeters: failed to calculate pm: warning: simpleWarning in sqrt(a * c): NaNs produced eilers peeters: failed to calculate ik: warning: simpleWarning in sqrt(a * c): NaNs produced eilers peeters: failed to calculate im: warning: simpleWarning in sqrt(c/a): NaNs produced eilers peeters: failed to calculate w: warning: simpleWarning in sqrt(a * c): NaNs produced platt: failed to calculate im: warning: simpleWarning in log((alpha + beta)/beta): NaNs produced eilers peeters: failed to calculate pm: warning: simpleWarning in sqrt(a * c): NaNs produced eilers peeters: failed to calculate ik: warning: simpleWarning in sqrt(a * c): NaNs produced eilers peeters: failed to calculate im: warning: simpleWarning in sqrt(c/a): NaNs produced eilers peeters: failed to calculate w: warning: simpleWarning in sqrt(a * c): NaNs produced platt: failed to calculate im: warning: simpleWarning in log((alpha + beta)/beta): NaNs produced platt: failed to calculate im: warning: simpleWarning in log((alpha + beta)/beta): NaNs produced skipped file: 20231214_12.csv because of error: Error in value[[3L]](cond): error while calculating vollenweider model: Error in nlsModel(formula, mf, start, wts): singular gradient matrix at initial parameter estimates skipped file: 20231214_15.csv because of error: Error in value[[3L]](cond): error while calculating vollenweider model: Error in nlsModel(formula, mf, start, wts): singular gradient matrix at initial parameter estimates Saving _problems/test-compare_regression_models_total-50.R Saving _problems/test-compare_regression_models_total-51.R [ FAIL 4 | WARN 0 | SKIP 0 | PASS 1073 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-compare_regression_models_etr_II.R:21:5'): compare_regression_models etr II ── Expected `model_points_etr_II[["platt"]]` to equal 20. Differences: `actual`: 19.0 `expected`: 20.0 ── Failure ('test-compare_regression_models_etr_II.R:22:5'): compare_regression_models etr II ── Expected `model_points_etr_II[["vollenweider"]]` to equal 39. Differences: `actual`: 40.0 `expected`: 39.0 ── Failure ('test-compare_regression_models_total.R:50:5'): compare_regression_models etr I + II ── Expected `result[["platt_total"]]` to equal 39. Differences: `actual`: 38.0 `expected`: 39.0 ── Failure ('test-compare_regression_models_total.R:51:5'): compare_regression_models etr I + II ── Expected `result[["vollenweider_total"]]` to equal 72. Differences: `actual`: 73.0 `expected`: 72.0 [ FAIL 4 | WARN 0 | SKIP 0 | PASS 1073 ] Error: ! Test failures. Execution halted Flavor: r-devel-windows-x86_64