CRAN Package Check Results for Package mets

Last updated on 2025-04-02 20:52:09 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.3.5 286.14 485.83 771.97 OK
r-devel-linux-x86_64-debian-gcc 1.3.5 193.91 323.30 517.21 ERROR
r-devel-linux-x86_64-fedora-clang 1.3.5 1301.68 ERROR
r-devel-linux-x86_64-fedora-gcc 1.3.5 1319.40 ERROR
r-devel-macos-arm64 1.3.5 385.00 OK
r-devel-macos-x86_64 1.3.5 673.00 OK
r-devel-windows-x86_64 1.3.5 291.00 513.00 804.00 OK
r-patched-linux-x86_64 1.3.5 289.50 474.64 764.14 OK
r-release-linux-x86_64 1.3.5 271.67 469.72 741.39 OK
r-release-macos-arm64 1.3.5 321.00 NOTE
r-release-macos-x86_64 1.3.5 645.00 NOTE
r-release-windows-x86_64 1.3.5 269.00 497.00 766.00 NOTE
r-oldrel-macos-arm64 1.3.5 NOTE
r-oldrel-macos-x86_64 1.3.5 602.00 NOTE
r-oldrel-windows-x86_64 1.3.5 343.00 654.00 997.00 NOTE

Check Details

Version: 1.3.5
Check: examples
Result: ERROR Running examples in ‘mets-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: drelevel > ### Title: relev levels for data frames > ### Aliases: drelevel dlevels dlevel dlev drelev dlev<- dlevel<- drelev<- > ### drelevel<- dfactor dfactor<- dnumeric dnumeric<- > > ### ** Examples > > > data(mena) > dstr(mena) 'data.frame': 2000 obs. of 7 variables: $ cohort : Factor w/ 4 levels "[1973,1975]",..: 1 1 1 1 1 1 1 1 1 1 ... $ agemena : num 13.8 12.7 12.4 13.1 13.5 ... $ status : int 1 1 1 1 1 1 1 1 1 1 ... $ zyg : Factor w/ 2 levels "MZ","DZ": 2 2 1 1 1 1 1 1 1 1 ... $ twinnum : int 2 1 2 1 2 1 2 1 2 1 ... $ id : num 1 1 2 2 3 3 4 4 5 5 ... $ mothermena: num 13.5 13.5 12.5 12.5 14.7 ... Error in structure(res, ngroupvar = 0, class = c("daggregate", class(res))) : attempt to set an attribute on NULL Calls: dstr -> daggregate -> structure Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.3.5
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘basic-dutils.Rmd’ using rmarkdown Quitting from basic-dutils.Rmd:190-193 [unnamed-chunk-15] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `structure()`: ! attempt to set an attribute on NULL --- Backtrace: ▆ 1. └─mets::dstr(melanoma) 2. └─mets::daggregate(...) 3. └─base::structure(res, ngroupvar = 0, class = c("daggregate", class(res))) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'basic-dutils.Rmd' failed with diagnostics: attempt to set an attribute on NULL --- failed re-building ‘basic-dutils.Rmd’ --- re-building ‘binomial-family.Rmd’ using rmarkdown --- finished re-building ‘binomial-family.Rmd’ --- re-building ‘binomial-twin.Rmd’ using rmarkdown --- finished re-building ‘binomial-twin.Rmd’ --- re-building ‘binreg-TRS.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/binreg-TRS_files/figure-html/unnamed-chunk-4-1.png 686x528 pixels, 3x8 bits/pixel, RGB Input IDAT size = 33394 bytes Input file size = 33520 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27541 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27541 Output IDAT size = 27541 bytes (5853 bytes decrease) Output file size = 27619 bytes (5901 bytes = 17.60% decrease) --- finished re-building ‘binreg-TRS.Rmd’ --- re-building ‘binreg-ate.Rmd’ using rmarkdown --- finished re-building ‘binreg-ate.Rmd’ --- re-building ‘binreg.Rmd’ using rmarkdown --- finished re-building ‘binreg.Rmd’ --- re-building ‘cifreg.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cifreg_files/figure-html/unnamed-chunk-3-1.png 686x528 pixels, 3x8 bits/pixel, RGB Input IDAT size = 29464 bytes Input file size = 29578 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24398 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24398 Output IDAT size = 24398 bytes (5066 bytes decrease) Output file size = 24476 bytes (5102 bytes = 17.25% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cifreg_files/figure-html/unnamed-chunk-4-1.png 686x528 pixels, 3x8 bits/pixel, RGB Input IDAT size = 17177 bytes Input file size = 17279 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13514 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13514 Output IDAT size = 13514 bytes (3663 bytes decrease) Output file size = 13592 bytes (3687 bytes = 21.34% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cifreg_files/figure-html/unnamed-chunk-6-1.png 686x528 pixels, 3x8 bits/pixel, RGB Input IDAT size = 17762 bytes Input file size = 17864 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14313 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14313 Output IDAT size = 14313 bytes (3449 bytes decrease) Output file size = 14391 bytes (3473 bytes = 19.44% decrease) --- finished re-building ‘cifreg.Rmd’ --- re-building ‘cooking-survival-data.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-4-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 12416 bytes Input file size = 12506 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10086 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10086 Output IDAT size = 10086 bytes (2330 bytes decrease) Output file size = 10164 bytes (2342 bytes = 18.73% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-5-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 19044 bytes Input file size = 19146 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13453 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13453 Output IDAT size = 13453 bytes (5591 bytes decrease) Output file size = 13531 bytes (5615 bytes = 29.33% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-6-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 8766 bytes Input file size = 8856 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6621 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6621 Output IDAT size = 6621 bytes (2145 bytes decrease) Output file size = 6699 bytes (2157 bytes = 24.36% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-6-2.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 14183 bytes Input file size = 14273 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10058 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10058 Output IDAT size = 10058 bytes (4125 bytes decrease) Output file size = 10136 bytes (4137 bytes = 28.98% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-8-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 13535 bytes Input file size = 13625 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10680 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10680 Output IDAT size = 10680 bytes (2855 bytes decrease) Output file size = 10758 bytes (2867 bytes = 21.04% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-8-2.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 16226 bytes Input file size = 16316 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12366 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12366 Output IDAT size = 12366 bytes (3860 bytes decrease) Output file size = 12444 bytes (3872 bytes = 23.73% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-9-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 22317 bytes Input file size = 22419 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17405 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17405 Output IDAT size = 17405 bytes (4912 bytes decrease) Output file size = 17483 bytes (4936 bytes = 22.02% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-10-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 21800 bytes Input file size = 21902 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17162 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17162 Output IDAT size = 17162 bytes (4638 bytes decrease) Output file size = 17240 bytes (4662 bytes = 21.29% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-11-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 24118 bytes Input file size = 24220 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18156 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18156 Output IDAT size = 18156 bytes (5962 bytes decrease) Output file size = 18234 bytes (5986 bytes = 24.72% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-12-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 12968 bytes Input file size = 13058 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10314 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10314 Output IDAT size = 10314 bytes (2654 bytes decrease) Output file size = 10392 bytes (2666 bytes = 20.42% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-14-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 7657 bytes Input file size = 7735 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6380 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6380 Output IDAT size = 6380 bytes (1277 bytes decrease) Output file size = 6458 bytes (1277 bytes = 16.51% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-14-2.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 7442 bytes Input file size = 7520 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5944 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5944 Output IDAT size = 5944 bytes (1498 bytes decrease) Output file size = 6022 bytes (1498 bytes = 19.92% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/cooking-survival-data_files/figure-html/unnamed-chunk-14-3.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 16221 bytes Input file size = 16311 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12751 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12751 Output IDAT size = 12751 bytes (3470 bytes decrease) Output file size = 12829 bytes (3482 bytes = 21.35% decrease) --- finished re-building ‘cooking-survival-data.Rmd’ --- re-building ‘glm-utility.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/glm-utility_files/figure-html/unnamed-chunk-3-1.png 686x528 pixels, 3x8 bits/pixel, RGB Input IDAT size = 26142 bytes Input file size = 26256 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21135 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21135 Output IDAT size = 21135 bytes (5007 bytes decrease) Output file size = 21213 bytes (5043 bytes = 19.21% decrease) --- finished re-building ‘glm-utility.Rmd’ --- re-building ‘haplo-discrete-ttp.Rmd’ using rmarkdown --- finished re-building ‘haplo-discrete-ttp.Rmd’ --- re-building ‘interval-discrete-survival.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/interval-discrete-survival_files/figure-html/unnamed-chunk-3-1.png 686x528 pixels, 8 bits/pixel, 253 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 5459 bytes Input file size = 6308 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4417 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4417 Output IDAT size = 4417 bytes (1042 bytes decrease) Output file size = 4495 bytes (1813 bytes = 28.74% decrease) --- finished re-building ‘interval-discrete-survival.Rmd’ --- re-building ‘marginal-cox.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/marginal-cox_files/figure-html/unnamed-chunk-5-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 9374 bytes Input file size = 9464 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7026 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7026 Output IDAT size = 7026 bytes (2348 bytes decrease) Output file size = 7104 bytes (2360 bytes = 24.94% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/marginal-cox_files/figure-html/unnamed-chunk-6-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 11740 bytes Input file size = 11830 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8587 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8587 Output IDAT size = 8587 bytes (3153 bytes decrease) Output file size = 8665 bytes (3165 bytes = 26.75% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/marginal-cox_files/figure-html/unnamed-chunk-9-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 60657 bytes Input file size = 60819 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53824 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53824 Output IDAT size = 53824 bytes (6833 bytes decrease) Output file size = 53902 bytes (6917 bytes = 11.37% decrease) --- finished re-building ‘marginal-cox.Rmd’ --- re-building ‘mediation-survival.Rmd’ using rmarkdown --- finished re-building ‘mediation-survival.Rmd’ --- re-building ‘phreg_rct.Rmd’ using rmarkdown --- finished re-building ‘phreg_rct.Rmd’ --- re-building ‘quantitative-twin.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/quantitative-twin_files/figure-html/scatter1-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 44960 bytes Input file size = 45098 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 36542 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 36542 Output IDAT size = 36542 bytes (8418 bytes decrease) Output file size = 36620 bytes (8478 bytes = 18.80% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/quantitative-twin_files/figure-html/scatter2-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 52082 bytes Input file size = 52232 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40796 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40796 Output IDAT size = 40796 bytes (11286 bytes decrease) Output file size = 40874 bytes (11358 bytes = 21.75% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/quantitative-twin_files/figure-html/marg1-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 10244 bytes Input file size = 10334 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7524 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7524 Output IDAT size = 7524 bytes (2720 bytes decrease) Output file size = 7602 bytes (2732 bytes = 26.44% decrease) --- finished re-building ‘quantitative-twin.Rmd’ --- re-building ‘recurrent-events.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-4-1.png 350x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 14712 bytes Input file size = 14802 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11850 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11850 Output IDAT size = 11850 bytes (2862 bytes decrease) Output file size = 11928 bytes (2874 bytes = 19.42% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-6-1.png 350x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 18914 bytes Input file size = 19016 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15347 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15347 Output IDAT size = 15347 bytes (3567 bytes decrease) Output file size = 15425 bytes (3591 bytes = 18.88% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-7-1.png 350x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 15318 bytes Input file size = 15408 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12587 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12587 Output IDAT size = 12587 bytes (2731 bytes decrease) Output file size = 12665 bytes (2743 bytes = 17.80% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-8-1.png 350x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 19911 bytes Input file size = 20013 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15268 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15268 Output IDAT size = 15268 bytes (4643 bytes decrease) Output file size = 15346 bytes (4667 bytes = 23.32% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-9-1.png 350x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 8497 bytes Input file size = 8587 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6707 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6707 Output IDAT size = 6707 bytes (1790 bytes decrease) Output file size = 6785 bytes (1802 bytes = 20.99% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-11-1.png 350x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 12817 bytes Input file size = 12907 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10187 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10187 Output IDAT size = 10187 bytes (2630 bytes decrease) Output file size = 10265 bytes (2642 bytes = 20.47% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-14-1.png 350x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 11458 bytes Input file size = 11548 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9121 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9121 Output IDAT size = 9121 bytes (2337 bytes decrease) Output file size = 9199 bytes (2349 bytes = 20.34% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-19-1.png 350x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 10897 bytes Input file size = 10987 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8793 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8793 Output IDAT size = 8793 bytes (2104 bytes decrease) Output file size = 8871 bytes (2116 bytes = 19.26% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-21-1.png 350x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 15891 bytes Input file size = 15981 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10840 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10840 Output IDAT size = 10840 bytes (5051 bytes decrease) Output file size = 10918 bytes (5063 bytes = 31.68% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-22-1.png 350x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 8014 bytes Input file size = 8092 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6490 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6490 Output IDAT size = 6490 bytes (1524 bytes decrease) Output file size = 6568 bytes (1524 bytes = 18.83% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-23-1.png 350x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 27625 bytes Input file size = 27739 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19869 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19869 Output IDAT size = 19869 bytes (7756 bytes decrease) Output file size = 19947 bytes (7792 bytes = 28.09% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-24-1.png 350x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 18534 bytes Input file size = 18636 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14954 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14954 Output IDAT size = 14954 bytes (3580 bytes decrease) Output file size = 15032 bytes (3604 bytes = 19.34% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-26-1.png 350x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 11732 bytes Input file size = 11822 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8714 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8714 Output IDAT size = 8714 bytes (3018 bytes decrease) Output file size = 8792 bytes (3030 bytes = 25.63% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/recurrent-events_files/figure-html/unnamed-chunk-27-1.png 350x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 20137 bytes Input file size = 20239 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16853 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16853 Output IDAT size = 16853 bytes (3284 bytes decrease) Output file size = 16931 bytes (3308 bytes = 16.34% decrease) --- finished re-building ‘recurrent-events.Rmd’ --- re-building ‘rmst-ate.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/rmst-ate_files/figure-html/unnamed-chunk-2-1.png 686x528 pixels, 3x8 bits/pixel, RGB Input IDAT size = 54310 bytes Input file size = 54460 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 46862 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 46862 Output IDAT size = 46862 bytes (7448 bytes decrease) Output file size = 46940 bytes (7520 bytes = 13.81% decrease) --- finished re-building ‘rmst-ate.Rmd’ --- re-building ‘survival-ate.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/survival-ate_files/figure-html/unnamed-chunk-2-1.png 686x528 pixels, 3x8 bits/pixel, RGB Input IDAT size = 14473 bytes Input file size = 14563 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12368 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12368 Output IDAT size = 12368 bytes (2105 bytes decrease) Output file size = 12446 bytes (2117 bytes = 14.54% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/survival-ate_files/figure-html/unnamed-chunk-3-1.png 686x528 pixels, 3x8 bits/pixel, RGB Input IDAT size = 17439 bytes Input file size = 17541 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14038 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14038 Output IDAT size = 14038 bytes (3401 bytes decrease) Output file size = 14116 bytes (3425 bytes = 19.53% decrease) --- finished re-building ‘survival-ate.Rmd’ --- re-building ‘time-to-event-family-studies-arev.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/survival-marginal-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 13873 bytes Input file size = 13963 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10313 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10313 Output IDAT size = 10313 bytes (3560 bytes decrease) Output file size = 10391 bytes (3572 bytes = 25.58% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/concordance-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 14731 bytes Input file size = 14821 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11198 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11198 Output IDAT size = 11198 bytes (3533 bytes decrease) Output file size = 11276 bytes (3545 bytes = 23.92% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/unnamed-chunk-9-1.png 357x275 pixels, 8 bits/pixel, 251 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 5480 bytes Input file size = 6323 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4899 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4899 Output IDAT size = 4899 bytes (581 bytes decrease) Output file size = 4977 bytes (1346 bytes = 21.29% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/concordance2-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 16107 bytes Input file size = 16197 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12228 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12228 Output IDAT size = 12228 bytes (3879 bytes decrease) Output file size = 12306 bytes (3891 bytes = 24.02% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/concordance3-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 17124 bytes Input file size = 17226 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13176 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13176 Output IDAT size = 13176 bytes (3948 bytes decrease) Output file size = 13254 bytes (3972 bytes = 23.06% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/unnamed-chunk-17-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 8823 bytes Input file size = 8913 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6840 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6840 Output IDAT size = 6840 bytes (1983 bytes decrease) Output file size = 6918 bytes (1995 bytes = 22.38% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/biprobittime1-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 12350 bytes Input file size = 12440 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9619 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9619 Output IDAT size = 9619 bytes (2731 bytes decrease) Output file size = 9697 bytes (2743 bytes = 22.05% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/unnamed-chunk-19-1.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 8476 bytes Input file size = 8566 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6389 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6389 Output IDAT size = 6389 bytes (2087 bytes decrease) Output file size = 6467 bytes (2099 bytes = 24.50% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/unnamed-chunk-19-2.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 8821 bytes Input file size = 8911 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6793 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6793 Output IDAT size = 6793 bytes (2028 bytes decrease) Output file size = 6871 bytes (2040 bytes = 22.89% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/unnamed-chunk-19-3.png 357x275 pixels, 3x8 bits/pixel, RGB Input IDAT size = 8623 bytes Input file size = 8713 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6395 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6395 Output IDAT size = 6395 bytes (2228 bytes decrease) Output file size = 6473 bytes (2240 bytes = 25.71% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mets.Rcheck/vign_test/mets/vignettes/time-to-event-family-studies-arev_files/figure-html/unnamed-chunk-19-4.png 357x275 pixels, 8 bits/pixel, 213 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 2385 bytes Input file size = 3114 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 1993 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 1993 Output IDAT size = 1993 bytes (392 bytes decrease) Output file size = 2071 bytes (1043 bytes = 33.49% decrease) --- finished re-building ‘time-to-event-family-studies-arev.Rmd’ --- re-building ‘twostage-survival.Rmd’ using rmarkdown --- finished re-building ‘twostage-survival.Rmd’ --- re-building ‘while-alive.Rmd’ using rmarkdown --- finished re-building ‘while-alive.Rmd’ SUMMARY: processing the following file failed: ‘basic-dutils.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.3.5
Check: examples
Result: ERROR Running examples in ‘mets-Ex.R’ failed The error most likely occurred in: > ### Name: drelevel > ### Title: relev levels for data frames > ### Aliases: drelevel dlevels dlevel dlev drelev dlev<- dlevel<- drelev<- > ### drelevel<- dfactor dfactor<- dnumeric dnumeric<- > > ### ** Examples > > > data(mena) > dstr(mena) 'data.frame': 2000 obs. of 7 variables: $ cohort : Factor w/ 4 levels "[1973,1975]",..: 1 1 1 1 1 1 1 1 1 1 ... $ agemena : num 13.8 12.7 12.4 13.1 13.5 ... $ status : int 1 1 1 1 1 1 1 1 1 1 ... $ zyg : Factor w/ 2 levels "MZ","DZ": 2 2 1 1 1 1 1 1 1 1 ... $ twinnum : int 2 1 2 1 2 1 2 1 2 1 ... $ id : num 1 1 2 2 3 3 4 4 5 5 ... $ mothermena: num 13.5 13.5 12.5 12.5 14.7 ... Error in structure(res, ngroupvar = 0, class = c("daggregate", class(res))) : attempt to set an attribute on NULL Calls: dstr -> daggregate -> structure Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.3.5
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘basic-dutils.Rmd’ using rmarkdown Quitting from basic-dutils.Rmd:190-193 [unnamed-chunk-15] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `structure()`: ! attempt to set an attribute on NULL --- Backtrace: ▆ 1. └─mets::dstr(melanoma) 2. └─mets::daggregate(...) 3. └─base::structure(res, ngroupvar = 0, class = c("daggregate", class(res))) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'basic-dutils.Rmd' failed with diagnostics: attempt to set an attribute on NULL --- failed re-building ‘basic-dutils.Rmd’ --- re-building ‘binomial-family.Rmd’ using rmarkdown --- finished re-building ‘binomial-family.Rmd’ --- re-building ‘binomial-twin.Rmd’ using rmarkdown --- finished re-building ‘binomial-twin.Rmd’ --- re-building ‘binreg-TRS.Rmd’ using rmarkdown Using optipng is skipped as output is variable --- finished re-building ‘binreg-TRS.Rmd’ --- re-building ‘binreg-ate.Rmd’ using rmarkdown --- finished re-building ‘binreg-ate.Rmd’ --- re-building ‘binreg.Rmd’ using rmarkdown --- finished re-building ‘binreg.Rmd’ --- re-building ‘cifreg.Rmd’ using rmarkdown Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable --- finished re-building ‘cifreg.Rmd’ --- re-building ‘cooking-survival-data.Rmd’ using rmarkdown Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable --- finished re-building ‘cooking-survival-data.Rmd’ --- re-building ‘glm-utility.Rmd’ using rmarkdown Using optipng is skipped as output is variable --- finished re-building ‘glm-utility.Rmd’ --- re-building ‘haplo-discrete-ttp.Rmd’ using rmarkdown --- finished re-building ‘haplo-discrete-ttp.Rmd’ --- re-building ‘interval-discrete-survival.Rmd’ using rmarkdown Using optipng is skipped as output is variable --- finished re-building ‘interval-discrete-survival.Rmd’ --- re-building ‘marginal-cox.Rmd’ using rmarkdown Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable --- finished re-building ‘marginal-cox.Rmd’ --- re-building ‘mediation-survival.Rmd’ using rmarkdown --- finished re-building ‘mediation-survival.Rmd’ --- re-building ‘phreg_rct.Rmd’ using rmarkdown --- finished re-building ‘phreg_rct.Rmd’ --- re-building ‘quantitative-twin.Rmd’ using rmarkdown Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable --- finished re-building ‘quantitative-twin.Rmd’ --- re-building ‘recurrent-events.Rmd’ using rmarkdown Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable --- finished re-building ‘recurrent-events.Rmd’ --- re-building ‘rmst-ate.Rmd’ using rmarkdown Using optipng is skipped as output is variable --- finished re-building ‘rmst-ate.Rmd’ --- re-building ‘survival-ate.Rmd’ using rmarkdown Using optipng is skipped as output is variable Using optipng is skipped as output is variable --- finished re-building ‘survival-ate.Rmd’ --- re-building ‘time-to-event-family-studies-arev.Rmd’ using rmarkdown Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable Using optipng is skipped as output is variable --- finished re-building ‘time-to-event-family-studies-arev.Rmd’ --- re-building ‘twostage-survival.Rmd’ using rmarkdown --- finished re-building ‘twostage-survival.Rmd’ --- re-building ‘while-alive.Rmd’ using rmarkdown --- finished re-building ‘while-alive.Rmd’ SUMMARY: processing the following file failed: ‘basic-dutils.Rmd’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.3.5
Check: installed package size
Result: NOTE installed size is 29.0Mb sub-directories of 1Mb or more: R 2.0Mb doc 3.6Mb libs 21.4Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.