CRAN Package Check Results for Maintainer ‘Lars Snipen <lars.snipen at nmbu.no>’

Last updated on 2025-04-12 20:52:19 CEST.

Package	NOTE	OK
microclass	14
microcontax	11	3
micropan		14
microseq	11	3

Package microclass

Current CRAN status: NOTE: 14

Version: 1.2
Check: C++ specification
Result: NOTE Specified C++11: please drop specification unless essential Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-arm64, r-devel-macos-x86_64, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 1.2
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: small.16S.Rd: microcontax Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64

Version: 1.2
Check: dependencies in R code
Result: NOTE Namespace in Imports field not imported from: ‘tibble’ All declared Imports should be used. Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.2
Check: for GNU extensions in Makefiles
Result: NOTE GNU make is a SystemRequirements. Flavors: r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package microcontax

Current CRAN status: NOTE: 11, OK: 3

Version: 1.2
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: getDomain.Rd: readFasta Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Package unavailable to check Rd xrefs: ‘microcontax.data’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64

Version: 1.2
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘microcontax.data’ Flavors: r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 1.2
Check: Rd cross-references
Result: NOTE Package unavailable to check Rd xrefs: ‘microcontax.data’ Flavors: r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package micropan

Current CRAN status: OK: 14

Package microseq

Current CRAN status: NOTE: 11, OK: 3

Version: 2.1.6
Check: Rd files
Result: NOTE checkRd: (-1) readFastq.Rd:62: Lost braces 62 | code{\link{readFasta}}. | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-arm64, r-devel-macos-x86_64, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Version: 2.1.6
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: findOrfs.Rd: tibble gff2fasta.Rd: tibble lorfs.Rd: tibble msalign.Rd: tibble readFasta.Rd: tibble readFastq.Rd: tibble readGFF.Rd: tibble Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64