Last updated on 2024-05-02 13:50:45 CEST.
| Package | ERROR | OK |
|---|---|---|
| dowser | 5 | 8 |
Current CRAN status: ERROR: 5, OK: 8
Version: 2.1.0
Check: examples
Result: ERROR
Running examples in ‘dowser-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: maskCodons
> ### Title: 'maskCodons' Masks codons split by insertions
> ### Aliases: maskCodons
>
> ### ** Examples
>
> s = "ATCATCATC..."
> q = "ATCTTTATCATC"
> print(maskCodons(1,q,s,TRUE))
Error in .load_package_gracefully("pwalign", "Starting with BioC 3.19, ", :
Could not load package pwalign. Is it installed?
Note that Starting with BioC 3.19, calling pairwiseAlignment() requires
the pwalign package. Please install it with:
BiocManager::install("pwalign")
Calls: print ... <Anonymous> -> .call_fun_in_pwalign -> .load_package_gracefully
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 2.1.0
Check: examples
Result: ERROR
Running examples in ‘dowser-Ex.R’ failed
The error most likely occurred in:
> ### Name: maskCodons
> ### Title: 'maskCodons' Masks codons split by insertions
> ### Aliases: maskCodons
>
> ### ** Examples
>
> s = "ATCATCATC..."
> q = "ATCTTTATCATC"
> print(maskCodons(1,q,s,TRUE))
Error in .load_package_gracefully("pwalign", "starting with BioC 3.19, ", :
Could not load package pwalign. Is it installed?
Note that starting with BioC 3.19, calling pairwiseAlignment() requires
the pwalign package. Please install it with:
BiocManager::install("pwalign")
Calls: print ... <Anonymous> -> .call_fun_in_pwalign -> .load_package_gracefully
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
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