CRAN Package Check Results for Maintainer ‘Jan Lisec <jan.lisec at bam.de>’

Last updated on 2026-02-15 09:50:59 CET.

Package	ERROR	NOTE	OK
CorMID			14
CorrectOverloadedPeaks			14
eCerto			14
fioRa	2		12
HiResTEC			14
InterpretMSSpectrum		1	13
IsoCor			14
MetabolomicsBasics		1	13

Package CorMID

Current CRAN status: OK: 14

Package CorrectOverloadedPeaks

Current CRAN status: OK: 14

Package eCerto

Current CRAN status: OK: 14

Package fioRa

Current CRAN status: ERROR: 2, OK: 12

Version: 0.3.7
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [36s/96s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(fioRa) > > testthat::test_check("fioRa") Saving _problems/test-fct_read_fiora-43.R Loading required package: shiny [ FAIL 1 | WARN 0 | SKIP 5 | PASS 45 ] ══ Skipped tests (5) ═══════════════════════════════════════════════════════════ • On CRAN (5): 'test-app_utils.R:40:1', 'test-app_utils.R:66:1', 'test-find_fiora_predict_paths.R:2:3', 'test-run_script.R:3:3', 'test-run_script.R:18:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-fct_read_fiora.R:43:3'): fioRa can read the standard fiora example annotated output mgf as Spectra format ── Error in `verify_suggested(pkg = c("S4Vectors", "Spectra"))`: The use of this function requires package Spectra. Please install. Backtrace: ▆ 1. └─fioRa::read_fiora(fl = fl, fmt = "Spectra") at test-fct_read_fiora.R:43:3 2. └─fioRa:::convert2Spectra(out) 3. └─fioRa:::verify_suggested(pkg = c("S4Vectors", "Spectra")) [ FAIL 1 | WARN 0 | SKIP 5 | PASS 45 ] Error: ! Test failures. Execution halted Flavor: r-release-macos-x86_64

Version: 0.3.7
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘Spectra’ Flavor: r-oldrel-macos-arm64

Version: 0.3.7
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [12s/22s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(fioRa) > > testthat::test_check("fioRa") 2026-02-15 17:09:55.478 R[89880:297180] XType: Using static font registry. Saving _problems/test-fct_read_fiora-43.R Loading required package: shiny [ FAIL 1 | WARN 0 | SKIP 5 | PASS 45 ] ══ Skipped tests (5) ═══════════════════════════════════════════════════════════ • On CRAN (5): 'test-app_utils.R:40:1', 'test-app_utils.R:66:1', 'test-find_fiora_predict_paths.R:2:3', 'test-run_script.R:3:3', 'test-run_script.R:18:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-fct_read_fiora.R:43:3'): fioRa can read the standard fiora example annotated output mgf as Spectra format ── Error in `verify_suggested(pkg = c("S4Vectors", "Spectra"))`: The use of this function requires package Spectra. Please install. Backtrace: ▆ 1. └─fioRa::read_fiora(fl = fl, fmt = "Spectra") at test-fct_read_fiora.R:43:3 2. └─fioRa:::convert2Spectra(out) 3. └─fioRa:::verify_suggested(pkg = c("S4Vectors", "Spectra")) [ FAIL 1 | WARN 0 | SKIP 5 | PASS 45 ] Error: ! Test failures. Downloading uv...Done! Downloading cpython-3.12.12-macos-aarch64-none (download) (16.9MiB) Downloaded cpython-3.12.12-macos-aarch64-none (download) Downloading numpy (14.0MiB) Downloaded numpy Installed 1 package in 12ms Execution halted Flavor: r-oldrel-macos-arm64

Package HiResTEC

Current CRAN status: OK: 14

Package InterpretMSSpectrum

Current CRAN status: NOTE: 1, OK: 13

Version: 1.5.2
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘Rdisop’ Flavor: r-oldrel-macos-arm64

Package IsoCor

Current CRAN status: OK: 14

Package MetabolomicsBasics

Current CRAN status: NOTE: 1, OK: 13

Version: 1.4.7
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'ropls', 'xcms' Flavor: r-oldrel-macos-arm64