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Last updated on 2026-10-07 01:55:40 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.0 | 7.72 | 743.73 | 751.45 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.0 | OK | ||||
| r-devel-linux-x86_64-fedora-clang | 0.1.0 | 491.98 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.0 | 476.74 | OK | |||
| r-devel-windows-x86_64 | 0.1.0 | 10.00 | 485.00 | 495.00 | OK | |
| r-patched-linux-x86_64 | 0.1.0 | 8.85 | 700.42 | 709.27 | OK | |
| r-release-linux-x86_64 | 0.1.0 | OK | ||||
| r-release-macos-arm64 | 0.1.0 | 2.00 | 114.00 | 116.00 | OK | |
| r-release-macos-x86_64 | 0.1.0 | 6.00 | 543.00 | 549.00 | OK | |
| r-release-windows-x86_64 | 0.1.0 | 10.00 | 453.00 | 463.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.0 | 2.00 | 110.00 | 112.00 | OK | |
| r-oldrel-macos-x86_64 | 0.1.0 | 5.00 | 323.00 | 328.00 | OK | |
| r-oldrel-windows-x86_64 | 0.1.0 | 13.00 | 560.00 | 573.00 | ERROR |
Version: 0.1.0
Check: tests
Result: ERROR
Running 'spelling.R' [1s]
Running 'testthat.R' [252s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(intraclass)
>
> test_check("intraclass")
Starting 2 test processes.
> test-icc-lavaan-multilevel.R: i Treating raters with the same label in different clusters as the same raters (crossed with clusters, Design 1).
> test-icc-lavaan-multilevel.R: i If each cluster has its own raters, give them cluster-unique labels or pass `design = "nested_in_clusters"`.
> test-icc-lavaan-multilevel.R: This message is displayed once per session.
> test-d-study.R: i Treating raters with the same label in different clusters as the same raters (crossed with clusters, Design 1).
> test-d-study.R: i If each cluster has its own raters, give them cluster-unique labels or pass `design = "nested_in_clusters"`.
> test-d-study.R: This message is displayed once per session.
> test-d-study.R: # D-study projection: multilevel two-way random, absolute agreement & consistency
> test-d-study.R: Observed raters: 5 | CI: 95% montecarlo (10000 draws)
> test-d-study.R: type level m estimate 95% CI
> test-d-study.R: agreement subject 1 0.387 [0.160, 0.590]
> test-d-study.R: agreement subject 2 0.558 [0.276, 0.742]
> test-d-study.R: agreement subject 3 0.655 [0.364, 0.812]
> test-d-study.R: agreement subject 4 0.717 [0.433, 0.852]
> test-d-study.R: agreement cluster 1 0.568 [0.227, 0.831]
> test-d-study.R: agreement cluster 2 0.724 [0.371, 0.908]
> test-d-study.R: agreement cluster 3 0.798 [0.469, 0.937]
> test-d-study.R: agreement cluster 4 0.840 [0.541, 0.952]
> test-d-study.R: consistency subject 1 0.690 [0.626, 0.748]
> test-d-study.R: consistency subject 2 0.817 [0.770, 0.856]
> test-d-study.R: consistency subject 3 0.870 [0.834, 0.899]
> test-d-study.R: consistency subject 4 0.899 [0.870, 0.922]
> test-d-study.R: consistency cluster 1 0.909 [0.813, 0.958]
> test-d-study.R: consistency cluster 2 0.953 [0.897, 0.979]
> test-d-study.R: consistency cluster 3 0.968 [0.929, 0.986]
> test-d-study.R: consistency cluster 4 0.976 [0.945, 0.989]
> test-icc-multilevel.R: ! Dropping "agreement": raters do not bridge clusters, so the rater main-effect variance cannot be separated from the cluster-by-rater variance -- this design is effectively rater-nested (Design 2) for agreement. Reporting "consistency".
> test-boundary-policy.R: boundary (singular) fit: see help('isSingular')
> test-choose-icc.R: -- Recommended ICC -------------------------------------------------------------
> test-choose-icc.R: Design: two-way random, absolute agreement
> test-choose-icc.R:
> test-choose-icc.R: Recommendation: ICC(A,1)
> test-choose-icc.R: Shrout & Fleiss equivalent: ICC(A,1) = ICC(2,1)
> test-choose-icc.R:
> test-choose-icc.R: Why:
> test-choose-icc.R: - Crossed (two-way): the same raters judge every subject.
> test-choose-icc.R: - Absolute agreement: the value itself must match; a systematic difference between raters counts as error.
> test-choose-icc.R: - Single rater: you will act on one rater's score.
> test-choose-icc.R: - Random raters: a sample you generalize beyond, to the rater universe they were drawn from.
> test-choose-icc.R:
> test-choose-icc.R: Run this on your data:
> test-choose-icc.R: icc(data, score, subject, rater, type = "agreement", unit = "single")
> test-choose-icc.R:
> test-choose-icc.R: Notes:
> test-choose-icc.R: - Complete vs. incomplete is automatic: icc() uses whatever ratings are present and projects ICC(*,k) to the effective number of ratings (k_eff). The design must stay connected, or icc() fails loudly.
> test-choose-icc.R: -- Choosing an ICC -------------------------------------------------------------
> test-choose-icc.R: So far: Model = twoway
> test-choose-icc.R: So far: Model = twoway > Type = agreement
> test-choose-icc.R: So far: Model = twoway > Type = agreement > Unit = single
> test-choose-icc.R: So far: Model = twoway > Type = agreement > Unit = single > Raters = random
> test-choose-icc.R: -- Choosing an ICC -------------------------------------------------------------
> test-choose-icc.R: So far: Model = twoway
> test-choose-icc.R: So far: Model = twoway > Type = both
> test-choose-icc.R: So far: Model = twoway > Type = both > Unit = single
> test-choose-icc.R: So far: Model = twoway > Type = both > Unit = single > Raters = random
> test-choose-icc.R: -- Choosing an ICC -------------------------------------------------------------
> test-choose-icc.R: So far: Model = oneway
> test-choose-icc.R: -- Choosing an ICC -------------------------------------------------------------
> test-choose-icc.R: So far: Model = twoway > Type = consistency
> test-choose-icc.R: So far: Model = twoway > Type = consistency > Unit = single
> test-choose-icc.R: So far: Model = twoway > Type = consistency > Unit = single > Raters = random
> test-choose-icc.R: -- Choosing an ICC -------------------------------------------------------------
> test-choose-icc.R: So far: Model = twoway
> test-choose-icc.R: So far: Model = twoway > Type = agreement
> test-choose-icc.R: So far: Model = twoway > Type = agreement > Unit = both
> test-choose-icc.R: So far: Model = twoway > Type = agreement > Unit = both > Raters = random
> test-choose-icc.R: So far: Model = twoway > Type = agreement > Unit = both > Raters = random >
> test-choose-icc.R: Multilevel = yes
> test-choose-icc.R: > q
> test-choose-icc.R: 1. single
> test-choose-icc.R: 2. average
> test-choose-icc.R: 3. both
> test-choose-icc.R: -- Choosing an ICC -------------------------------------------------------------
> test-choose-icc.R: So far: Model = twoway
> test-choose-icc.R: So far: Model = twoway > Type = consistency
> test-choose-icc.R: So far: Model = twoway > Type = consistency > Unit = single
> test-choose-icc.R: So far: Model = twoway > Type = consistency > Unit = single > Raters = random
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping the "agreement" D-study projection: absolute agreement cannot be projected to a different rater count for fixed raters. Reporting "consistency" for numeric units.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-ci-mpl.R: ! Dropping "consistency": `ci_method = "mpl"` is an absolute-agreement interval and does not define a consistency (ICC(C,.)) interval.
> test-exported-contract.R: ! Dropping "consistency": not defined when raters are nested within subjects (Design 3) -- the rater main effect cannot be separated, so only absolute agreement is defined (ten Hove et al. 2022, p. 6).
> test-exported-contract.R: ! Dropping "consistency": not defined when raters are nested within subjects (Design 3) -- the rater main effect cannot be separated, so only absolute agreement is defined (ten Hove et al. 2022, p. 6).
> test-exported-contract.R: ! Dropping "consistency": not defined when raters are nested within subjects (Design 3) -- the rater main effect cannot be separated, so only absolute agreement is defined (ten Hove et al. 2022, p. 6).
> test-exported-contract.R: ! Dropping "consistency": not defined when raters are nested within subjects (Design 3) -- the rater main effect cannot be separated, so only absolute agreement is defined (ten Hove et al. 2022, p. 6).
> test-exported-contract.R: ! Dropping "consistency": not defined when raters are nested within subjects (Design 3) -- the rater main effect cannot be separated, so only absolute agreement is defined (ten Hove et al. 2022, p. 6).
> test-icc-fixed-multilevel.R: boundary (singular) fit: see help('isSingular')
> test-icc-methods.R: -- Intraclass correlation: two-way random, absolute agreement & consistency ----
> test-icc-methods.R: Subjects: 6 | Raters: 4 (random) | Observations: 24 of 24 cells (complete)
> test-icc-methods.R: Engine: glmmTMB (REML) | CI: 95% montecarlo (10000 draws)
> test-icc-methods.R:
> test-icc-methods.R: index estimate 95% CI
> test-icc-methods.R: Absolute agreement
> test-icc-methods.R: ICC(A,1) 0.290 [0.053, 0.714]
> test-icc-methods.R: ICC(A,k) 0.620 [0.184, 0.909]
> test-icc-methods.R: Consistency
> test-icc-methods.R: ICC(C,1) 0.715 [0.337, 0.926]
> test-icc-methods.R: ICC(C,k) 0.909 [0.670, 0.980]
> test-icc-methods.R:
> test-icc-methods.R: Variance components: subject 2.556, rater 5.244, residual 1.019
> test-icc-methods.R: Shrout & Fleiss equivalent: ICC(A,1) = ICC(2,1), ICC(A,k) = ICC(2,k)
> test-icc-nested-multilevel.R: ! Dropping "consistency": not defined when raters are nested within subjects (Design 3) -- the rater main effect cannot be separated, so only absolute agreement is defined (ten Hove et al. 2022, p. 6).
> test-icc-nested-multilevel.R: ! Dropping "consistency": not defined when raters are nested within subjects (Design 3) -- the rater main effect cannot be separated, so only absolute agreement is defined (ten Hove et al. 2022, p. 6).
> test-icc-nested-multilevel.R: ! Dropping "consistency": not defined when raters are nested within subjects (Design 3) -- the rater main effect cannot be separated, so only absolute agreement is defined (ten Hove et al. 2022, p. 6).
> test-icc-nested-multilevel.R: ! Dropping "consistency": not defined when raters are nested within subjects (Design 3) -- the rater main effect cannot be separated, so only absolute agreement is defined (ten Hove et al. 2022, p. 6).
> test-icc-nested-multilevel.R: ! Dropping "consistency": not defined when raters are nested within subjects (Design 3) -- the rater main effect cannot be separated, so only absolute agreement is defined (ten Hove et al. 2022, p. 6).
> test-icc-type-vector.R: i Treating raters with the same label in different clusters as the same raters (crossed with clusters, Design 1).
> test-icc-type-vector.R: i If each cluster has its own raters, give them cluster-unique labels or pass `design = "nested_in_clusters"`.
> test-icc-type-vector.R: This message is displayed once per session.
> test-icc-type-vector.R: i Treating raters with the same label in different clusters as the same raters (crossed with clusters, Design 1).
> test-icc-type-vector.R: i If each cluster has its own raters, give them cluster-unique labels or pass `design = "nested_in_clusters"`.
> test-icc-type-vector.R: This message is displayed once per session.
> test-m118-both-components-dgp.R:
Error:
! testthat subprocess exited in file 'test-m118-both-components-dgp.R'.
Caused by error:
! R session crashed with exit code -1073741819
Backtrace:
▆
1. └─testthat::test_check("intraclass")
2. └─testthat::test_dir(...)
3. └─testthat:::test_files(...)
4. └─testthat:::test_files_parallel(...)
5. ├─withr::with_dir(...)
6. │ └─base::force(code)
7. ├─testthat::with_reporter(...)
8. │ └─base::tryCatch(...)
9. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
10. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
11. │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
12. └─testthat:::parallel_event_loop_chunky(queue, reporters, ".")
13. └─queue$poll(Inf)
14. └─base::lapply(...)
15. └─testthat (local) FUN(X[[i]], ...)
16. └─private$handle_error(msg, i)
17. └─cli::cli_abort(...)
18. └─rlang::abort(...)
Execution halted
Flavor: r-oldrel-windows-x86_64
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