Last updated on 2025-10-09 20:04:09 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2.0 | 2.14 | 41.47 | 43.61 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.2.0 | 1.39 | 31.57 | 32.96 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.2.0 | 68.11 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.2.0 | 91.90 | OK | |||
| r-devel-windows-x86_64 | 0.2.0 | 5.00 | 59.00 | 64.00 | ERROR | |
| r-patched-linux-x86_64 | 0.2.0 | 2.29 | 40.80 | 43.09 | ERROR | |
| r-release-linux-x86_64 | 0.2.0 | 2.02 | 40.72 | 42.74 | ERROR | |
| r-release-macos-arm64 | 0.2.0 | 36.00 | OK | |||
| r-release-macos-x86_64 | 0.2.0 | 67.00 | OK | |||
| r-release-windows-x86_64 | 0.2.0 | 3.00 | 58.00 | 61.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.2.0 | 28.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.2.0 | 43.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.2.0 | 5.00 | 67.00 | 72.00 | ERROR |
Version: 0.2.0
Check: examples
Result: ERROR
Running examples in ‘horseshoe-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: HS.normal.means
> ### Title: The horseshoe prior for the sparse normal means problem
> ### Aliases: HS.normal.means
>
> ### ** Examples
>
> #Empirical Bayes example with 20 signals, rest is noise
> #Posterior mean for the signals is plotted
> #And variable selection is performed using the credible intervals
> #And the credible intervals are plotted
> truth <- c(rep(0, 80), rep(8, 20))
> data <- truth + rnorm(100, 1)
> tau.hat <- HS.MMLE(data, Sigma2 = 1)
> res.HS1 <- HS.normal.means(data, method.tau = "fixed", tau = tau.hat,
+ method.sigma = "fixed", Sigma2 = 1)
[1] 1000
[1] 2000
[1] 3000
[1] 4000
[1] 5000
[1] 6000
> #Plot the posterior mean against the data (signals in blue)
> plot(data, res.HS1$BetaHat, col = c(rep("black", 80), rep("blue", 20)))
> #Find the selected betas (ideally, the last 20 are equal to 1)
> HS.var.select(res.HS1, data, method = "intervals")
[1] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
[38] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0
[75] 0 0 0 0 0 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
> #Plot the credible intervals
> library(Hmisc)
Attaching package: ‘Hmisc’
The following objects are masked from ‘package:base’:
format.pval, units
> xYplot(Cbind(res.HS1$BetaHat, res.HS1$LeftCI, res.HS1$RightCI) ~ 1:100)
Error in sRequire("lattice") :
package lattice is required but not installed
Calls: xYplot -> sRequire
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.2.0
Check: examples
Result: ERROR
Running examples in ‘horseshoe-Ex.R’ failed
The error most likely occurred in:
> ### Name: HS.normal.means
> ### Title: The horseshoe prior for the sparse normal means problem
> ### Aliases: HS.normal.means
>
> ### ** Examples
>
> #Empirical Bayes example with 20 signals, rest is noise
> #Posterior mean for the signals is plotted
> #And variable selection is performed using the credible intervals
> #And the credible intervals are plotted
> truth <- c(rep(0, 80), rep(8, 20))
> data <- truth + rnorm(100, 1)
> tau.hat <- HS.MMLE(data, Sigma2 = 1)
> res.HS1 <- HS.normal.means(data, method.tau = "fixed", tau = tau.hat,
+ method.sigma = "fixed", Sigma2 = 1)
[1] 1000
[1] 2000
[1] 3000
[1] 4000
[1] 5000
[1] 6000
> #Plot the posterior mean against the data (signals in blue)
> plot(data, res.HS1$BetaHat, col = c(rep("black", 80), rep("blue", 20)))
> #Find the selected betas (ideally, the last 20 are equal to 1)
> HS.var.select(res.HS1, data, method = "intervals")
[1] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
[38] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0
[75] 0 0 0 0 0 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
> #Plot the credible intervals
> library(Hmisc)
Attaching package: ‘Hmisc’
The following objects are masked from ‘package:base’:
format.pval, units
> xYplot(Cbind(res.HS1$BetaHat, res.HS1$LeftCI, res.HS1$RightCI) ~ 1:100)
Error in sRequire("lattice") :
package lattice is required but not installed
Calls: xYplot -> sRequire
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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