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Last updated on 2026-07-03 17:53:10 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.0.11 | 491.50 | 715.01 | 1206.51 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.0.11 | 470.38 | 498.71 | 969.09 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 2.0.11 | 600.00 | 1842.57 | 2442.57 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 2.0.11 | 1020.00 | 1722.03 | 2742.03 | OK | |
| r-devel-windows-x86_64 | 2.0.11 | 474.00 | 749.00 | 1223.00 | OK | |
| r-patched-linux-x86_64 | 2.0.11 | 593.21 | 726.74 | 1319.95 | ERROR | |
| r-release-linux-x86_64 | 2.0.11 | OK | ||||
| r-release-macos-arm64 | 2.0.11 | 108.00 | 181.00 | 289.00 | OK | |
| r-release-macos-x86_64 | 2.0.11 | 327.00 | 886.00 | 1213.00 | OK | |
| r-release-windows-x86_64 | 2.0.11 | 452.00 | 776.00 | 1228.00 | OK | |
| r-oldrel-macos-arm64 | 2.0.11 | 103.00 | 181.00 | 284.00 | OK | |
| r-oldrel-macos-x86_64 | 2.0.11 | 318.00 | 806.00 | 1124.00 | OK | |
| r-oldrel-windows-x86_64 | 2.0.11 | 625.00 | 1047.00 | 1672.00 | OK |
Version: 2.0.11
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘vignette1.Rmd’ using rmarkdown
--- finished re-building ‘vignette1.Rmd’
--- re-building ‘vignette10.Rmd’ using rmarkdown
--- finished re-building ‘vignette10.Rmd’
--- re-building ‘vignette2.rmd’ using rmarkdown
--- finished re-building ‘vignette2.rmd’
--- re-building ‘vignette3.rmd’ using rmarkdown
--- finished re-building ‘vignette3.rmd’
--- re-building ‘vignette4.rmd’ using rmarkdown
Quitting from vignette4.rmd:190-196 [unnamed-chunk-10]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `FAstart()`:
! Calculating starting values failed. Maybe too many latent variables. Try smaller 'num.lv' value or change 'starting.val' to 'zero' or 'random'.
---
Backtrace:
▆
1. └─gllvm::gllvm(y = spider$abund, family = poisson(), num.lv = 2)
2. └─gllvm:::gllvm.iter(...)
3. ├─base::do.call(gllvm.TMB, args)
4. └─gllvm (local) `<fn>`(...)
5. └─gllvm:::start_values_gllvm_TMB(...)
6. └─gllvm:::FAstart(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'vignette4.rmd' failed with diagnostics:
Calculating starting values failed. Maybe too many latent variables. Try smaller 'num.lv' value or change 'starting.val' to 'zero' or 'random'.
--- failed re-building ‘vignette4.rmd’
--- re-building ‘vignette5.Rmd’ using rmarkdown
--- finished re-building ‘vignette5.Rmd’
--- re-building ‘vignette6.Rmd’ using rmarkdown
--- finished re-building ‘vignette6.Rmd’
--- re-building ‘vignette7.Rmd’ using rmarkdown
--- finished re-building ‘vignette7.Rmd’
--- re-building ‘vignette8.Rmd’ using rmarkdown
--- finished re-building ‘vignette8.Rmd’
--- re-building ‘vignette9.Rmd’ using rmarkdown
--- finished re-building ‘vignette9.Rmd’
SUMMARY: processing the following file failed:
‘vignette4.rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 2.0.11
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘vignette1.Rmd’ using rmarkdown
--- finished re-building ‘vignette1.Rmd’
--- re-building ‘vignette10.Rmd’ using rmarkdown
--- finished re-building ‘vignette10.Rmd’
--- re-building ‘vignette2.rmd’ using rmarkdown
--- finished re-building ‘vignette2.rmd’
--- re-building ‘vignette3.rmd’ using rmarkdown
Quitting from vignette3.rmd:147-152 [unnamed-chunk-6]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `FAstart()`:
! Calculating starting values failed. Maybe too many latent variables. Try smaller 'num.lv' value or change 'starting.val' to 'zero' or 'random'.
---
Backtrace:
▆
1. └─gllvm::gllvm(y = spider$abund, family = poisson(), num.lv = 2)
2. └─gllvm:::gllvm.iter(...)
3. ├─base::do.call(gllvm.TMB, args)
4. └─gllvm (local) `<fn>`(...)
5. └─gllvm:::start_values_gllvm_TMB(...)
6. └─gllvm:::FAstart(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'vignette3.rmd' failed with diagnostics:
Calculating starting values failed. Maybe too many latent variables. Try smaller 'num.lv' value or change 'starting.val' to 'zero' or 'random'.
--- failed re-building ‘vignette3.rmd’
--- re-building ‘vignette4.rmd’ using rmarkdown
--- finished re-building ‘vignette4.rmd’
--- re-building ‘vignette5.Rmd’ using rmarkdown
--- finished re-building ‘vignette5.Rmd’
--- re-building ‘vignette6.Rmd’ using rmarkdown
--- finished re-building ‘vignette6.Rmd’
--- re-building ‘vignette7.Rmd’ using rmarkdown
--- finished re-building ‘vignette7.Rmd’
--- re-building ‘vignette8.Rmd’ using rmarkdown
--- finished re-building ‘vignette8.Rmd’
--- re-building ‘vignette9.Rmd’ using rmarkdown
--- finished re-building ‘vignette9.Rmd’
SUMMARY: processing the following file failed:
‘vignette3.rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-linux-x86_64
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