Last updated on 2025-10-30 15:50:12 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.10 | 523.01 | 1341.54 | 1864.55 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.10 | 454.71 | 1128.10 | 1582.81 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.0.10 | 1500.00 | -111.29 | 1388.71 | WARN | |
| r-devel-linux-x86_64-fedora-gcc | 1.0.10 | 1680.00 | 1094.22 | 2774.22 | OK | |
| r-devel-windows-x86_64 | 1.0.10 | 537.00 | 715.00 | 1252.00 | OK | |
| r-patched-linux-x86_64 | 1.0.10 | 571.29 | 1606.15 | 2177.44 | OK | |
| r-release-linux-x86_64 | 1.0.10 | 573.06 | 1608.65 | 2181.71 | OK | |
| r-release-macos-arm64 | 1.0.10 | 149.00 | 144.00 | 293.00 | OK | |
| r-release-macos-x86_64 | 1.0.10 | 298.00 | 303.00 | 601.00 | OK | |
| r-release-windows-x86_64 | 1.0.10 | 561.00 | 704.00 | 1265.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.10 | 165.00 | 150.00 | 315.00 | NOTE | |
| r-oldrel-macos-x86_64 | 1.0.10 | 303.00 | 306.00 | 609.00 | NOTE | |
| r-oldrel-windows-x86_64 | 1.0.10 | 107.00 | 208.00 | 315.00 | NOTE |
Version: 1.0.10
Check: whether the package can be loaded with stated dependencies
Result: WARN
using C++ compiler: ‘clang version 21.1.4’
make[1]: Entering directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwbetareg_compile_20251025231840'
/usr/local/clang21/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"/data/gannet/ripley/R/test-clang/TMB/include" -I"/data/gannet/ripley/R/test-clang/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_gkwbetareg -DCPPAD_FRAMEWORK -isystem /usr/local/clang21/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwbetareg_compile_20251025231840/gkwbetareg.cpp -o /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwbetareg_compile_20251025231840/gkwbetareg.o
In file included from /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwbetareg_compile_20251025231840/gkwbetareg.cpp:17:
In file included from /data/gannet/ripley/R/test-clang/TMB/include/TMB.hpp:96:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwbetareg_compile_20251025231840/gkwbetareg.cpp:17:
In file included from /data/gannet/ripley/R/test-clang/TMB/include/TMB.hpp:96:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
3 warnings generated.
/usr/local/clang21/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang21/lib -L/usr/local/clang21/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -L/usr/local/clang21/lib/clang/21/lib/x86_64-unknown-linux-gnu -o /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwbetareg_compile_20251025231840/gkwbetareg.so /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwbetareg_compile_20251025231840/gkwbetareg.o
make[1]: Leaving directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwbetareg_compile_20251025231840'
make[1]: Entering directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwbetareg_compile_20251025231840'
make[1]: Leaving directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwbetareg_compile_20251025231840'
using C++ compiler: ‘clang version 21.1.4’
make[1]: Entering directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/bkwreg_compile_20251025232341'
/usr/local/clang21/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"/data/gannet/ripley/R/test-clang/TMB/include" -I"/data/gannet/ripley/R/test-clang/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_bkwreg -DCPPAD_FRAMEWORK -isystem /usr/local/clang21/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/bkwreg_compile_20251025232341/bkwreg.cpp -o /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/bkwreg_compile_20251025232341/bkwreg.o
In file included from /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/bkwreg_compile_20251025232341/bkwreg.cpp:13:
In file included from /data/gannet/ripley/R/test-clang/TMB/include/TMB.hpp:96:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/bkwreg_compile_20251025232341/bkwreg.cpp:13:
In file included from /data/gannet/ripley/R/test-clang/TMB/include/TMB.hpp:96:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
3 warnings generated.
/usr/local/clang21/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang21/lib -L/usr/local/clang21/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -L/usr/local/clang21/lib/clang/21/lib/x86_64-unknown-linux-gnu -o /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/bkwreg_compile_20251025232341/bkwreg.so /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/bkwreg_compile_20251025232341/bkwreg.o
make[1]: Leaving directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/bkwreg_compile_20251025232341'
make[1]: Entering directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/bkwreg_compile_20251025232341'
make[1]: Leaving directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/bkwreg_compile_20251025232341'
using C++ compiler: ‘clang version 21.1.4’
make[1]: Entering directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/ekwreg_compile_20251025232757'
/usr/local/clang21/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"/data/gannet/ripley/R/test-clang/TMB/include" -I"/data/gannet/ripley/R/test-clang/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_ekwreg -DCPPAD_FRAMEWORK -isystem /usr/local/clang21/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/ekwreg_compile_20251025232757/ekwreg.cpp -o /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/ekwreg_compile_20251025232757/ekwreg.o
In file included from /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/ekwreg_compile_20251025232757/ekwreg.cpp:19:
In file included from /data/gannet/ripley/R/test-clang/TMB/include/TMB.hpp:96:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/ekwreg_compile_20251025232757/ekwreg.cpp:19:
In file included from /data/gannet/ripley/R/test-clang/TMB/include/TMB.hpp:96:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
3 warnings generated.
/usr/local/clang21/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang21/lib -L/usr/local/clang21/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -L/usr/local/clang21/lib/clang/21/lib/x86_64-unknown-linux-gnu -o /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/ekwreg_compile_20251025232757/ekwreg.so /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/ekwreg_compile_20251025232757/ekwreg.o
make[1]: Leaving directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/ekwreg_compile_20251025232757'
make[1]: Entering directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/ekwreg_compile_20251025232757'
make[1]: Leaving directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/ekwreg_compile_20251025232757'
using C++ compiler: ‘clang version 21.1.4’
make[1]: Entering directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwmletmb_compile_20251025233223'
/usr/local/clang21/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"/data/gannet/ripley/R/test-clang/TMB/include" -I"/data/gannet/ripley/R/test-clang/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_gkwmletmb -DCPPAD_FRAMEWORK -isystem /usr/local/clang21/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwmletmb_compile_20251025233223/gkwmletmb.cpp -o /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwmletmb_compile_20251025233223/gkwmletmb.o
In file included from /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwmletmb_compile_20251025233223/gkwmletmb.cpp:1:
In file included from /data/gannet/ripley/R/test-clang/TMB/include/TMB.hpp:96:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwmletmb_compile_20251025233223/gkwmletmb.cpp:1:
In file included from /data/gannet/ripley/R/test-clang/TMB/include/TMB.hpp:96:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
3 warnings generated.
/usr/local/clang21/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang21/lib -L/usr/local/clang21/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -L/usr/local/clang21/lib/clang/21/lib/x86_64-unknown-linux-gnu -o /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwmletmb_compile_20251025233223/gkwmletmb.so /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwmletmb_compile_20251025233223/gkwmletmb.o -fopenmp
make[1]: Leaving directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwmletmb_compile_20251025233223'
make[1]: Entering directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwmletmb_compile_20251025233223'
make[1]: Leaving directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwmletmb_compile_20251025233223'
using C++ compiler: ‘clang version 21.1.4’
make[1]: Entering directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwreg_compile_20251025233650'
/usr/local/clang21/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"/data/gannet/ripley/R/test-clang/TMB/include" -I"/data/gannet/ripley/R/test-clang/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_gkwreg -DCPPAD_FRAMEWORK -isystem /usr/local/clang21/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwreg_compile_20251025233650/gkwreg.cpp -o /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwreg_compile_20251025233650/gkwreg.o
In file included from /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwreg_compile_20251025233650/gkwreg.cpp:12:
In file included from /data/gannet/ripley/R/test-clang/TMB/include/TMB.hpp:96:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwreg_compile_20251025233650/gkwreg.cpp:12:
In file included from /data/gannet/ripley/R/test-clang/TMB/include/TMB.hpp:96:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
3 warnings generated.
/usr/local/clang21/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang21/lib -L/usr/local/clang21/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -L/usr/local/clang21/lib/clang/21/lib/x86_64-unknown-linux-gnu -o /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwreg_compile_20251025233650/gkwreg.so /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwreg_compile_20251025233650/gkwreg.o
make[1]: Leaving directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwreg_compile_20251025233650'
make[1]: Entering directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwreg_compile_20251025233650'
make[1]: Leaving directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/gkwreg_compile_20251025233650'
using C++ compiler: ‘clang version 21.1.4’
make[1]: Entering directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/kkwreg_compile_20251025234135'
/usr/local/clang21/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"/data/gannet/ripley/R/test-clang/TMB/include" -I"/data/gannet/ripley/R/test-clang/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_kkwreg -DCPPAD_FRAMEWORK -isystem /usr/local/clang21/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/kkwreg_compile_20251025234135/kkwreg.cpp -o /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/kkwreg_compile_20251025234135/kkwreg.o
In file included from /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/kkwreg_compile_20251025234135/kkwreg.cpp:16:
In file included from /data/gannet/ripley/R/test-clang/TMB/include/TMB.hpp:96:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/kkwreg_compile_20251025234135/kkwreg.cpp:16:
In file included from /data/gannet/ripley/R/test-clang/TMB/include/TMB.hpp:96:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
3 warnings generated.
/usr/local/clang21/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang21/lib -L/usr/local/clang21/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -L/usr/local/clang21/lib/clang/21/lib/x86_64-unknown-linux-gnu -o /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/kkwreg_compile_20251025234135/kkwreg.so /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/kkwreg_compile_20251025234135/kkwreg.o
make[1]: Leaving directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/kkwreg_compile_20251025234135'
make[1]: Entering directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/kkwreg_compile_20251025234135'
make[1]: Leaving directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/kkwreg_compile_20251025234135'
using C++ compiler: ‘clang version 21.1.4’
make[1]: Entering directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/kwreg_compile_20251025234631'
/usr/local/clang21/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"/data/gannet/ripley/R/test-clang/TMB/include" -I"/data/gannet/ripley/R/test-clang/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_kwreg -DCPPAD_FRAMEWORK -isystem /usr/local/clang21/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/kwreg_compile_20251025234631/kwreg.cpp -o /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/kwreg_compile_20251025234631/kwreg.o
In file included from /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/kwreg_compile_20251025234631/kwreg.cpp:19:
In file included from /data/gannet/ripley/R/test-clang/TMB/include/TMB.hpp:96:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:26:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseCore:61:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/kwreg_compile_20251025234631/kwreg.cpp:19:
In file included from /data/gannet/ripley/R/test-clang/TMB/include/TMB.hpp:96:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/Sparse:29:
In file included from /data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/SparseLU:35:
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/data/gannet/ripley/R/test-clang/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
make[1]: *** wait: No child processes. Stop.
make[1]: *** Waiting for unfinished jobs....
make[1]: *** wait: No child processes. Stop.
using C++ compiler: ‘clang version 21.1.4’
make[1]: Entering directory '/tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/mcreg_compile_20251025234830'
/usr/local/clang21/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I"/data/gannet/ripley/R/test-clang/TMB/include" -I"/data/gannet/ripley/R/test-clang/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_mcreg -DCPPAD_FRAMEWORK -isystem /usr/local/clang21/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/mcreg_compile_20251025234830/mcreg.cpp -o /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/mcreg_compile_20251025234830/mcreg.o
make[1]: *** [/data/gannet/ripley/R/R-clang/etc/Makeconf:209: /tmp/RtmpywcjOz/working_dir/RtmpNGwyU6/mcreg_compile_20251025234830/mcreg.o] Terminated
It looks like this package (or one of its dependent packages) has an
unstated dependence on a standard package. All dependencies must be
declared in DESCRIPTION.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.0.10
Check: installed package size
Result: NOTE
installed size is 10.6Mb
sub-directories of 1Mb or more:
libs 9.3Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 1.0.10
Check: whether the namespace can be loaded with stated dependencies
Result: NOTE
Warning in file.create(to[okay]) :
cannot create file 'C:/RTMP/gkwbetareg_20251021230326/gkwbetareg.cpp', reason 'No such file or directory'
Warning in value[[3L]](cond) :
Failed to pre-compile TMB model 'gkwbetareg': cannot change working directory
Warning in file.create(to[okay]) :
cannot create file 'C:/RTMP/bkwreg_20251021230326/bkwreg.cpp', reason 'No such file or directory'
Warning in value[[3L]](cond) :
Failed to pre-compile TMB model 'bkwreg': cannot change working directory
Warning in file.create(to[okay]) :
cannot create file 'C:/RTMP/ekwreg_20251021230326/ekwreg.cpp', reason 'No such file or directory'
Warning in value[[3L]](cond) :
Failed to pre-compile TMB model 'ekwreg': cannot change working directory
Warning in file.create(to[okay]) :
cannot create file 'C:/RTMP/gkwmletmb_20251021230326/gkwmletmb.cpp', reason 'No such file or directory'
Warning in value[[3L]](cond) :
Failed to pre-compile TMB model 'gkwmletmb': cannot change working directory
Warning in file.create(to[okay]) :
cannot create file 'C:/RTMP/gkwreg_20251021230326/gkwreg.cpp', reason 'No such file or directory'
Warning in value[[3L]](cond) :
Failed to pre-compile TMB model 'gkwreg': cannot change working directory
Warning in file.create(to[okay]) :
cannot create file 'C:/RTMP/kkwreg_20251021230326/kkwreg.cpp', reason 'No such file or directory'
Warning in value[[3L]](cond) :
Failed to pre-compile TMB model 'kkwreg': cannot change working directory
Warning in file.create(to[okay]) :
cannot create file 'C:/RTMP/kwreg_20251021230326/kwreg.cpp', reason 'No such file or directory'
Warning in value[[3L]](cond) :
Failed to pre-compile TMB model 'kwreg': cannot change working directory
Warning in file.create(to[okay]) :
cannot create file 'C:/RTMP/mcreg_20251021230326/mcreg.cpp', reason 'No such file or directory'
Warning in value[[3L]](cond) :
Failed to pre-compile TMB model 'mcreg': cannot change working directory
A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.
Probably some imports need to be declared in the NAMESPACE file.
Flavor: r-oldrel-windows-x86_64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.