Last updated on 2025-04-12 20:51:44 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.9 | 2.08 | 32.43 | 34.51 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.2 | 1.75 | 27.16 | 28.91 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 1.2 | 69.92 | NOTE | |||
| r-devel-macos-arm64 | 1.2 | 59.00 | OK | |||
| r-devel-macos-x86_64 | 1.2 | 76.00 | OK | |||
| r-devel-windows-x86_64 | 0.9 | 4.00 | 126.00 | 130.00 | OK | |
| r-patched-linux-x86_64 | 0.9 | 2.09 | 44.50 | 46.59 | OK | |
| r-release-linux-x86_64 | 0.9 | OK | ||||
| r-release-macos-arm64 | 1.2 | 45.00 | OK | |||
| r-release-macos-x86_64 | 1.2 | 102.00 | OK | |||
| r-release-windows-x86_64 | 1.2 | 6.00 | 82.00 | 88.00 | OK | |
| r-oldrel-macos-arm64 | 1.2 | 64.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.2 | 112.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.9 | 5.00 | 134.00 | 139.00 | OK |
Version: 0.9
Check: examples
Result: ERROR
Running examples in ‘geneExpressionFromGEO-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: getGeneExpressionFromGEO
> ### Title: Function that reads in the GEO code of a dataset, and returns
> ### the gene expression dataframe.
> ### Aliases: getGeneExpressionFromGEO
>
> ### ** Examples
>
> geneExpressionDF1 <- getGeneExpressionFromGEO("GSE3268", FALSE, FALSE)
Error in open.connection(x, "rb") : cannot open the connection
Calls: getGeneExpressionFromGEO -> <Anonymous> -> read_html.default
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.2
Check: examples
Result: ERROR
Running examples in ‘geneExpressionFromGEO-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: getGeneExpressionFromGEO
> ### Title: Function that reads in the GEO code of a dataset, and returns
> ### the gene expression dataframe.
> ### Aliases: getGeneExpressionFromGEO
>
> ### ** Examples
>
> geneExpressionDF1 <- getGeneExpressionFromGEO("GSE47018", FALSE, FALSE)
Processed URL: https://ftp.ncbi.nlm.nih.gov/geo/series/
Error in open.connection(x, "rb") : cannot open the connection
Calls: getGeneExpressionFromGEO -> <Anonymous> -> read_html.default
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.2
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘qpdf’
All declared Imports should be used.
Flavor: r-devel-linux-x86_64-fedora-gcc
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.