Last updated on 2024-05-02 09:51:31 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.3.0 | 864.06 | 286.10 | 1150.16 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.3.0 | 835.04 | 255.11 | 1090.15 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.3.0 | 1456.80 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.3.0 | 1382.51 | ERROR | |||
| r-devel-windows-x86_64 | 1.3.0 | 668.00 | 273.00 | 941.00 | ERROR | |
| r-patched-linux-x86_64 | 1.3.0 | 697.53 | 330.87 | 1028.40 | ERROR | |
| r-release-linux-x86_64 | 1.3.0 | 769.58 | 329.21 | 1098.79 | ERROR | |
| r-release-macos-arm64 | 1.3.0 | 344.00 | NOTE | |||
| r-release-windows-x86_64 | 1.3.0 | 668.00 | 262.00 | 930.00 | ERROR | |
| r-oldrel-macos-arm64 | 1.3.0 | 377.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 1.3.0 | 493.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 1.3.0 | 884.00 | 332.00 | 1216.00 | ERROR |
Version: 1.3.0
Check: for GNU extensions in Makefiles
Result: NOTE
GNU make is a SystemRequirements.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 1.3.0
Check: examples
Result: ERROR
Running examples in ‘expertsurv-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: expertsurv-package
> ### Title: Incorporating Expert Opinion with Parametric Survival Models
> ### Aliases: expertsurv-package expertsurv
> ### Keywords: Economic Evaluation Expert Health Modelling Opinion Survival
>
> ### ** Examples
>
> #Define expert opinion
> require("dplyr")
Loading required package: dplyr
Attaching package: ‘dplyr’
The following objects are masked from ‘package:stats’:
filter, lag
The following objects are masked from ‘package:base’:
intersect, setdiff, setequal, union
> param_expert_example1 <- list()
> #1 timepoint and 2 experts with equal weight,
> #first a normal distribution, second a non-standard t-distribution with
> #3 degrees of freedom
>
> param_expert_example1[[1]] <- data.frame(dist = c("norm","t"),
+ wi = c(0.5,0.5), # Ensure Weights sum to 1
+ param1 = c(0.1,0.12),
+ param2 = c(0.05,0.05),
+ param3 = c(NA,3))
>
>
> timepoint_expert <- 14
>
> data2 <- data %>% rename(status = censored) %>% mutate(time2 = ifelse(time > 10, 10, time),
+ status2 = ifelse(time> 10, 0, status))
>
> example1 <- fit.models.expert(formula=Surv(time2,status2)~1,data=data2,
+ distr=c("wph", "gomp"),
+ method="mle",
+ pool_type = "log pool",
+ opinion_type = "survival",
+ times_expert = timepoint_expert,
+ param_expert = param_expert_example1)
Error in get(x, envir = ns, inherits = FALSE) :
object 'deriv.test' not found
Calls: fit.models.expert ... format_output_fit.models -> lapply -> lapply -> FUN -> runMLE
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 1.3.0
Check: installed package size
Result: NOTE
installed size is 10.3Mb
sub-directories of 1Mb or more:
doc 1.7Mb
libs 7.0Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 1.3.0
Check: dependencies in R code
Result: NOTE
Namespaces in Imports field not imported from:
‘RcppParallel’ ‘rstantools’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.3.0
Check: examples
Result: ERROR
Running examples in ‘expertsurv-Ex.R’ failed
The error most likely occurred in:
> ### Name: expertsurv-package
> ### Title: Incorporating Expert Opinion with Parametric Survival Models
> ### Aliases: expertsurv-package expertsurv
> ### Keywords: Economic Evaluation Expert Health Modelling Opinion Survival
>
> ### ** Examples
>
> #Define expert opinion
> require("dplyr")
Loading required package: dplyr
Attaching package: ‘dplyr’
The following objects are masked from ‘package:stats’:
filter, lag
The following objects are masked from ‘package:base’:
intersect, setdiff, setequal, union
> param_expert_example1 <- list()
> #1 timepoint and 2 experts with equal weight,
> #first a normal distribution, second a non-standard t-distribution with
> #3 degrees of freedom
>
> param_expert_example1[[1]] <- data.frame(dist = c("norm","t"),
+ wi = c(0.5,0.5), # Ensure Weights sum to 1
+ param1 = c(0.1,0.12),
+ param2 = c(0.05,0.05),
+ param3 = c(NA,3))
>
>
> timepoint_expert <- 14
>
> data2 <- data %>% rename(status = censored) %>% mutate(time2 = ifelse(time > 10, 10, time),
+ status2 = ifelse(time> 10, 0, status))
>
> example1 <- fit.models.expert(formula=Surv(time2,status2)~1,data=data2,
+ distr=c("wph", "gomp"),
+ method="mle",
+ pool_type = "log pool",
+ opinion_type = "survival",
+ times_expert = timepoint_expert,
+ param_expert = param_expert_example1)
Error in get(x, envir = ns, inherits = FALSE) :
object 'deriv.test' not found
Calls: fit.models.expert ... format_output_fit.models -> lapply -> lapply -> FUN -> runMLE
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.