CRAN Package Check Results for Package dtComb

Last updated on 2025-04-03 17:49:45 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.7 5.74 174.09 179.83 OK
r-devel-linux-x86_64-debian-gcc 1.0.7 4.17 110.01 114.18 OK
r-devel-linux-x86_64-fedora-clang 1.0.7 314.93 OK
r-devel-linux-x86_64-fedora-gcc 1.0.7 302.07 OK
r-devel-macos-arm64 1.0.7 81.00 OK
r-devel-macos-x86_64 1.0.7 129.00 OK
r-devel-windows-x86_64 1.0.7 8.00 181.00 189.00 OK
r-patched-linux-x86_64 1.0.7 6.66 166.34 173.00 OK
r-release-linux-x86_64 1.0.7 5.48 162.93 168.41 OK
r-release-macos-arm64 1.0.7 74.00 OK
r-release-macos-x86_64 1.0.7 105.00 OK
r-release-windows-x86_64 1.0.7 8.00 179.00 187.00 OK
r-oldrel-macos-arm64 1.0.7 45.00 ERROR
r-oldrel-macos-x86_64 1.0.7 118.00 OK
r-oldrel-windows-x86_64 1.0.7 10.00 218.00 228.00 OK

Check Details

Version: 1.0.7
Check: examples
Result: ERROR Running examples in ‘dtComb-Ex.R’ failed The error most likely occurred in: > ### Name: linComb > ### Title: Linear Combination Methods for Diagnostic Test Scores > ### Aliases: linComb > > ### ** Examples > > # call data > data(laparotomy) > > # define the function parameters > markers <- laparotomy[, -1] > status <- factor(laparotomy$group, levels = c("not_needed", "needed")) > event <- "needed" > > score1 <- linComb( + markers = markers, status = status, event = event, + method = "logistic", resample = "none", show.plot = TRUE, + standardize = "none", direction = "<", cutoff.method = "Youden" + ) Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) : there is no package called ‘systemfonts’ Calls: linComb ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart Execution halted Flavor: r-oldrel-macos-arm64

Version: 1.0.7
Check: tests
Result: ERROR Running ‘testthat.R’ [2s/2s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(dtComb) > # require(APtools) > # # library(usethis) > > test_check("dtComb") [ FAIL 5 | WARN 0 | SKIP 0 | PASS 23 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-linComb.R:31:3'): (code run outside of `test_that()`) ────────── <packageNotFoundError/error/condition> Error in `loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])`: there is no package called 'systemfonts' Backtrace: ▆ 1. ├─dtComb::linComb(...) at test-linComb.R:31:3 2. │ └─dtComb:::rocsum(...) 3. └─base::loadNamespace(x) 4. ├─base::namespaceImportFrom(...) 5. │ └─base::asNamespace(ns) 6. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 7. ├─base::namespaceImportFrom(...) 8. │ └─base::asNamespace(ns) 9. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 10. ├─base::namespaceImportFrom(...) 11. │ └─base::asNamespace(ns) 12. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 13. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL) 14. └─base (local) withOneRestart(expr, restarts[[1L]]) 15. └─base (local) doWithOneRestart(return(expr), restart) ── Error ('test-mathComb.R:31:3'): (code run outside of `test_that()`) ───────── <packageNotFoundError/error/condition> Error in `loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])`: there is no package called 'systemfonts' Backtrace: ▆ 1. ├─dtComb::mathComb(...) at test-mathComb.R:31:3 2. │ └─dtComb:::rocsum(...) 3. └─base::loadNamespace(x) 4. ├─base::namespaceImportFrom(...) 5. │ └─base::asNamespace(ns) 6. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 7. ├─base::namespaceImportFrom(...) 8. │ └─base::asNamespace(ns) 9. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 10. ├─base::namespaceImportFrom(...) 11. │ └─base::asNamespace(ns) 12. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 13. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL) 14. └─base (local) withOneRestart(expr, restarts[[1L]]) 15. └─base (local) doWithOneRestart(return(expr), restart) ── Error ('test-nonlinComb.R:29:3'): (code run outside of `test_that()`) ─────── <packageNotFoundError/error/condition> Error in `loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])`: there is no package called 'systemfonts' Backtrace: ▆ 1. ├─dtComb::nonlinComb(...) at test-nonlinComb.R:29:3 2. │ └─dtComb:::rocsum(...) 3. └─base::loadNamespace(x) 4. ├─base::namespaceImportFrom(...) 5. │ └─base::asNamespace(ns) 6. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 7. ├─base::namespaceImportFrom(...) 8. │ └─base::asNamespace(ns) 9. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 10. ├─base::namespaceImportFrom(...) 11. │ └─base::asNamespace(ns) 12. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 13. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL) 14. └─base (local) withOneRestart(expr, restarts[[1L]]) 15. └─base (local) doWithOneRestart(return(expr), restart) ── Error ('test-predComb.R:37:3'): (code run outside of `test_that()`) ───────── <packageNotFoundError/error/condition> Error in `loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])`: there is no package called 'systemfonts' Backtrace: ▆ 1. ├─dtComb::linComb(...) at test-predComb.R:37:3 2. │ └─dtComb:::rocsum(...) 3. └─base::loadNamespace(x) 4. ├─base::namespaceImportFrom(...) 5. │ └─base::asNamespace(ns) 6. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 7. ├─base::namespaceImportFrom(...) 8. │ └─base::asNamespace(ns) 9. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 10. ├─base::namespaceImportFrom(...) 11. │ └─base::asNamespace(ns) 12. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 13. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL) 14. └─base (local) withOneRestart(expr, restarts[[1L]]) 15. └─base (local) doWithOneRestart(return(expr), restart) ── Error ('test-standardize.R:43:3'): (code run outside of `test_that()`) ────── <packageNotFoundError/error/condition> Error in `loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])`: there is no package called 'systemfonts' Backtrace: ▆ 1. ├─dtComb::linComb(...) at test-standardize.R:43:3 2. │ └─dtComb:::rocsum(...) 3. └─base::loadNamespace(x) 4. ├─base::namespaceImportFrom(...) 5. │ └─base::asNamespace(ns) 6. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 7. ├─base::namespaceImportFrom(...) 8. │ └─base::asNamespace(ns) 9. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 10. ├─base::namespaceImportFrom(...) 11. │ └─base::asNamespace(ns) 12. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 13. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL) 14. └─base (local) withOneRestart(expr, restarts[[1L]]) 15. └─base (local) doWithOneRestart(return(expr), restart) [ FAIL 5 | WARN 0 | SKIP 0 | PASS 23 ] Error: Test failures Execution halted Flavor: r-oldrel-macos-arm64

Version: 1.0.7
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘vignettedtComb.Rnw’ using knitr Quitting from vignettedtComb.Rnw:221-235 [unnamed-chunk-7] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `loadNamespace()`: ! there is no package called 'systemfonts' --- Backtrace: x 1. +-dtComb::linComb(...) 2. | \-dtComb:::rocsum(...) 3. \-base::loadNamespace(x) 4. +-base::namespaceImportFrom(...) 5. | \-base::asNamespace(ns) 6. \-base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 7. +-base::namespaceImportFrom(...) 8. | \-base::asNamespace(ns) 9. \-base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 10. +-base::namespaceImportFrom(...) 11. | \-base::asNamespace(ns) 12. \-base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 13. \-base::withRestarts(stop(cond), retry_loadNamespace = function() NULL) 14. \-base (local) withOneRestart(expr, restarts[[1L]]) 15. \-base (local) doWithOneRestart(return(expr), restart) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'vignettedtComb.Rnw' failed with diagnostics: there is no package called 'systemfonts' --- failed re-building ‘vignettedtComb.Rnw’ SUMMARY: processing the following file failed: ‘vignettedtComb.Rnw’ Error: Vignette re-building failed. Execution halted Flavor: r-oldrel-macos-arm64

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.