CRAN Package Check Results for Package dsem

Last updated on 2025-02-02 07:50:08 CET.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	1.4.0	206.72	246.60	453.32	NOTE
r-devel-linux-x86_64-debian-gcc	1.4.0	160.67	180.50	341.17	NOTE
r-devel-linux-x86_64-fedora-clang	1.4.1			749.82	OK
r-devel-linux-x86_64-fedora-gcc	1.4.0			873.24	NOTE
r-devel-windows-x86_64	1.4.0	167.00	266.00	433.00	NOTE
r-patched-linux-x86_64	1.4.0	224.71	236.28	460.99	OK
r-release-linux-x86_64	1.4.0	210.03	237.35	447.38	OK
r-release-macos-arm64	1.4.0			171.00	NOTE
r-release-macos-x86_64	1.4.1			359.00	NOTE
r-release-windows-x86_64	1.4.0	182.00	267.00	449.00	OK
r-oldrel-macos-arm64	1.4.0			194.00	ERROR
r-oldrel-macos-x86_64	1.4.0			402.00	ERROR
r-oldrel-windows-x86_64	1.4.0	257.00	343.00	600.00	ERROR

Check Details

Version: 1.4.0
Check: DESCRIPTION meta-information
Result: NOTE Missing dependency on R >= 4.1.0 because package code uses the pipe |> or function shorthand \(...) syntax added in R 4.1.0. File(s) using such syntax: ‘dsem.R’ ‘make_dsem_ram.R’ ‘read_model.R’ ‘utility.R’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64

Version: 1.4.0
Check: installed package size
Result: NOTE installed size is 85.0Mb sub-directories of 1Mb or more: libs 84.3Mb Flavors: r-release-macos-arm64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 1.4.1
Check: installed package size
Result: NOTE installed size is 72.7Mb sub-directories of 1Mb or more: libs 72.0Mb Flavor: r-release-macos-x86_64

Version: 1.4.0
Check: examples
Result: ERROR Running examples in ‘dsem-Ex.R’ failed The error most likely occurred in: > ### Name: dsemRTMB > ### Title: Fit dynamic structural equation model > ### Aliases: dsemRTMB > > ### ** Examples > > # Define model > sem = " + # Link, lag, param_name + cprofits -> consumption, 0, a1 + cprofits -> consumption, 1, a2 + pwage -> consumption, 0, a3 + gwage -> consumption, 0, a3 + cprofits -> invest, 0, b1 + cprofits -> invest, 1, b2 + capital -> invest, 0, b3 + gnp -> pwage, 0, c2 + gnp -> pwage, 1, c3 + time -> pwage, 0, c1 + " > > # Load data > data(KleinI, package="AER") > TS = ts(data.frame(KleinI, "time"=time(KleinI) - 1931)) > tsdata = TS[,c("time","gnp","pwage","cprofits",'consumption', + "gwage","invest","capital")] > > # Fit model > fit = dsemRTMB( sem=sem, + tsdata = tsdata, + estimate_delta0 = TRUE, + control = dsem_control(quiet=TRUE) ) Read 10 records Error in advector(e1) : Invalid argument to 'advector' (lost class attribute?) Calls: dsemRTMB ... dgmrf -> as.vector -> Ops.advector -> Arith2 -> advector Execution halted Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 1.4.0
Check: tests
Result: ERROR Running ‘testthat.R’ [6s/7s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > > > library(testthat) > library(dsem) > > # Run tests > testthat::test_check("dsem") Read 5 records Coefficient_name Number_of_coefficients Type 1 beta_z 7 Fixed 2 delta0_j 2 Fixed 3 lnsigma_j 2 Fixed 4 mu_j 2 Random 5 x_tj 122 Random Read 5 records Coefficient_name Number_of_coefficients Type 1 beta_z 7 Fixed 2 delta0_j 2 Fixed 3 mu_j 2 Random 4 x_tj 122 Random Read 5 records Coefficient_name Number_of_coefficients Type 1 beta_z 7 Fixed 2 delta0_j 2 Fixed 3 mu_j 2 Random 4 x_tj 122 Random Read 5 records Coefficient_name Number_of_coefficients Type 1 beta_z 6 Fixed 2 delta0_j 2 Fixed 3 mu_j 2 Random Read 4 records Coefficient_name Number_of_coefficients Type 1 beta_z 6 Fixed 2 delta0_j 2 Fixed 3 mu_j 2 Random Read 4 records Coefficient_name Number_of_coefficients Type 1 beta_z 6 Fixed 2 mu_j 2 Random Read 4 records Coefficient_name Number_of_coefficients Type 1 beta_z 6 Fixed 2 delta0_j 2 Fixed 3 mu_j 2 Random Read 10 records Coefficient_name Number_of_coefficients Type 1 beta_z 17 Fixed 2 mu_j 8 Random Read 10 records Read 0 records Coefficient_name Number_of_coefficients Type 1 beta_z 2 Fixed 2 mu_j 2 Random Read 2 records Coefficient_name Number_of_coefficients Type 1 beta_z 2 Fixed 2 mu_j 2 Random Read 16 records Coefficient_name Number_of_coefficients Type 1 beta_z 24 Fixed 2 mu_j 8 Fixed 3 x_tj 232 Random Read 4 records Coefficient_name Number_of_coefficients Type 1 beta_z 5 Fixed 2 mu_j 4 Random Read 4 records Read 16 records [ FAIL 5 | WARN 12 | SKIP 0 | PASS 4 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-gmrf-versions.R:75:3'): dsem constant-variance options ────── apply(margvar, MARGIN = 2, FUN = sd) not equal to c(0, 0). 2/2 mismatches (average diff: NaN) [1] NA - 0 == NA [2] NA - 0 == NA ── Failure ('test-gmrf-versions.R:94:3'): dsem constant-variance options ────── apply(margvar, MARGIN = 2, FUN = sd) not equal to c(0, 0). 2/2 mismatches (average diff: NaN) [1] NA - 0 == NA [2] NA - 0 == NA ── Error ('test-platform.R:34:3'): dsem example is working ──────────────────── Error in `advector(e2)`: Invalid argument to 'advector' (lost class attribute?) Backtrace: ▆ 1. └─dsem::dsemRTMB(sem = sem, tsdata = tsdata, control = dsem_control(getsd = FALSE)) at test-platform.R:34:3 2. └─RTMB::MakeADFun(...) 3. └─obj$retape() 4. └─RTMB:::MakeADFunObject(...) 5. └─RTMB:::.MakeTape(mapfunc, obj$env$par) 6. └─RTMB (local) f(x) 7. └─dsem (local) func(pl) 8. └─dsem (local) f(p, ...) 9. └─RTMB::dgmrf(...) 10. └─RTMB::Ops.advector(as.vector(x), as.vector(mu)) 11. ├─RTMB:::Arith2(advector(e1), advector(e2), .Generic) 12. └─RTMB::advector(e2) ── Error ('test-platform.R:160:3'): Fixing parameters works ─────────────────── Error in `advector(e2)`: Invalid argument to 'advector' (lost class attribute?) Backtrace: ▆ 1. └─dsem::dsemRTMB(sem = sem, tsdata = tsdata, control = dsem_control(getsd = FALSE)) at test-platform.R:160:3 2. └─RTMB::MakeADFun(...) 3. └─obj$retape() 4. └─RTMB:::MakeADFunObject(...) 5. └─RTMB:::.MakeTape(mapfunc, obj$env$par) 6. └─RTMB (local) f(x) 7. └─dsem (local) func(pl) 8. └─dsem (local) f(p, ...) 9. └─RTMB::dgmrf(...) 10. └─RTMB::Ops.advector(as.vector(x), as.vector(mu)) 11. ├─RTMB:::Arith2(advector(e1), advector(e2), .Generic) 12. └─RTMB::advector(e2) ── Error ('test-priors.R:43:3'): priors interface is working ────────────────── Error in `advector(e2)`: Invalid argument to 'advector' (lost class attribute?) Backtrace: ▆ 1. └─dsem::dsemRTMB(...) at test-priors.R:43:3 2. └─RTMB::MakeADFun(...) 3. └─obj$retape() 4. └─RTMB:::MakeADFunObject(...) 5. └─RTMB:::.MakeTape(mapfunc, obj$env$par) 6. └─RTMB (local) f(x) 7. └─dsem (local) func(pl) 8. └─dsem (local) f(p, ...) 9. └─RTMB::dgmrf(...) 10. └─RTMB::Ops.advector(as.vector(x), as.vector(mu)) 11. ├─RTMB:::Arith2(advector(e1), advector(e2), .Generic) 12. └─RTMB::advector(e2) [ FAIL 5 | WARN 12 | SKIP 0 | PASS 4 ] Error: Test failures Execution halted Flavor: r-oldrel-macos-arm64

Version: 1.4.0
Check: tests
Result: ERROR Running ‘testthat.R’ [8s/9s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > > > library(testthat) > library(dsem) > > # Run tests > testthat::test_check("dsem") Read 5 records Coefficient_name Number_of_coefficients Type 1 beta_z 7 Fixed 2 delta0_j 2 Fixed 3 lnsigma_j 2 Fixed 4 mu_j 2 Random 5 x_tj 122 Random Read 5 records Coefficient_name Number_of_coefficients Type 1 beta_z 7 Fixed 2 delta0_j 2 Fixed 3 mu_j 2 Random 4 x_tj 122 Random Read 5 records Coefficient_name Number_of_coefficients Type 1 beta_z 7 Fixed 2 delta0_j 2 Fixed 3 mu_j 2 Random 4 x_tj 122 Random Read 5 records Coefficient_name Number_of_coefficients Type 1 beta_z 6 Fixed 2 delta0_j 2 Fixed 3 mu_j 2 Random Read 4 records Coefficient_name Number_of_coefficients Type 1 beta_z 6 Fixed 2 delta0_j 2 Fixed 3 mu_j 2 Random Read 4 records Coefficient_name Number_of_coefficients Type 1 beta_z 6 Fixed 2 mu_j 2 Random Read 4 records Coefficient_name Number_of_coefficients Type 1 beta_z 6 Fixed 2 delta0_j 2 Fixed 3 mu_j 2 Random Read 10 records Coefficient_name Number_of_coefficients Type 1 beta_z 17 Fixed 2 mu_j 8 Random Read 10 records Read 0 records Coefficient_name Number_of_coefficients Type 1 beta_z 2 Fixed 2 mu_j 2 Random Read 2 records Coefficient_name Number_of_coefficients Type 1 beta_z 2 Fixed 2 mu_j 2 Random Read 16 records Coefficient_name Number_of_coefficients Type 1 beta_z 24 Fixed 2 mu_j 8 Fixed 3 x_tj 232 Random Read 4 records Coefficient_name Number_of_coefficients Type 1 beta_z 5 Fixed 2 mu_j 4 Random Read 4 records Read 16 records [ FAIL 5 | WARN 12 | SKIP 0 | PASS 4 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-gmrf-versions.R:75:3'): dsem constant-variance options ────── apply(margvar, MARGIN = 2, FUN = sd) not equal to c(0, 0). 2/2 mismatches (average diff: NaN) [1] NA - 0 == NA [2] NA - 0 == NA ── Failure ('test-gmrf-versions.R:94:3'): dsem constant-variance options ────── apply(margvar, MARGIN = 2, FUN = sd) not equal to c(0, 0). 2/2 mismatches (average diff: NaN) [1] NA - 0 == NA [2] NA - 0 == NA ── Error ('test-platform.R:34:3'): dsem example is working ──────────────────── Error in `advector(e2)`: Invalid argument to 'advector' (lost class attribute?) Backtrace: ▆ 1. └─dsem::dsemRTMB(sem = sem, tsdata = tsdata, control = dsem_control(getsd = FALSE)) at test-platform.R:34:3 2. └─RTMB::MakeADFun(...) 3. └─obj$retape() 4. └─RTMB:::MakeADFunObject(...) 5. └─RTMB:::.MakeTape(mapfunc, obj$env$par) 6. └─RTMB (local) f(x) 7. └─dsem (local) func(pl) 8. └─dsem (local) f(p, ...) 9. └─RTMB::dgmrf(...) 10. └─RTMB::Ops.advector(as.vector(x), as.vector(mu)) 11. ├─RTMB:::Arith2(advector(e1), advector(e2), .Generic) 12. └─RTMB::advector(e2) ── Error ('test-platform.R:160:3'): Fixing parameters works ─────────────────── Error in `advector(e2)`: Invalid argument to 'advector' (lost class attribute?) Backtrace: ▆ 1. └─dsem::dsemRTMB(sem = sem, tsdata = tsdata, control = dsem_control(getsd = FALSE)) at test-platform.R:160:3 2. └─RTMB::MakeADFun(...) 3. └─obj$retape() 4. └─RTMB:::MakeADFunObject(...) 5. └─RTMB:::.MakeTape(mapfunc, obj$env$par) 6. └─RTMB (local) f(x) 7. └─dsem (local) func(pl) 8. └─dsem (local) f(p, ...) 9. └─RTMB::dgmrf(...) 10. └─RTMB::Ops.advector(as.vector(x), as.vector(mu)) 11. ├─RTMB:::Arith2(advector(e1), advector(e2), .Generic) 12. └─RTMB::advector(e2) ── Error ('test-priors.R:43:3'): priors interface is working ────────────────── Error in `advector(e2)`: Invalid argument to 'advector' (lost class attribute?) Backtrace: ▆ 1. └─dsem::dsemRTMB(...) at test-priors.R:43:3 2. └─RTMB::MakeADFun(...) 3. └─obj$retape() 4. └─RTMB:::MakeADFunObject(...) 5. └─RTMB:::.MakeTape(mapfunc, obj$env$par) 6. └─RTMB (local) f(x) 7. └─dsem (local) func(pl) 8. └─dsem (local) f(p, ...) 9. └─RTMB::dgmrf(...) 10. └─RTMB::Ops.advector(as.vector(x), as.vector(mu)) 11. ├─RTMB:::Arith2(advector(e1), advector(e2), .Generic) 12. └─RTMB::advector(e2) [ FAIL 5 | WARN 12 | SKIP 0 | PASS 4 ] Error: Test failures Execution halted Flavor: r-oldrel-macos-x86_64

Version: 1.4.0
Check: tests
Result: ERROR Running 'testthat.R' [15s] Running the tests in 'tests/testthat.R' failed. Complete output: > > > library(testthat) > library(dsem) > > # Run tests > testthat::test_check("dsem") Read 5 records Coefficient_name Number_of_coefficients Type 1 beta_z 7 Fixed 2 delta0_j 2 Fixed 3 lnsigma_j 2 Fixed 4 mu_j 2 Random 5 x_tj 122 Random Read 5 records Coefficient_name Number_of_coefficients Type 1 beta_z 7 Fixed 2 delta0_j 2 Fixed 3 mu_j 2 Random 4 x_tj 122 Random Read 5 records Coefficient_name Number_of_coefficients Type 1 beta_z 7 Fixed 2 delta0_j 2 Fixed 3 mu_j 2 Random 4 x_tj 122 Random Read 5 records Coefficient_name Number_of_coefficients Type 1 beta_z 6 Fixed 2 delta0_j 2 Fixed 3 mu_j 2 Random Read 4 records Coefficient_name Number_of_coefficients Type 1 beta_z 6 Fixed 2 delta0_j 2 Fixed 3 mu_j 2 Random Read 4 records Coefficient_name Number_of_coefficients Type 1 beta_z 6 Fixed 2 mu_j 2 Random Read 4 records Coefficient_name Number_of_coefficients Type 1 beta_z 6 Fixed 2 delta0_j 2 Fixed 3 mu_j 2 Random Read 10 records Coefficient_name Number_of_coefficients Type 1 beta_z 17 Fixed 2 mu_j 8 Random Read 10 records Read 0 records Coefficient_name Number_of_coefficients Type 1 beta_z 2 Fixed 2 mu_j 2 Random Read 2 records Coefficient_name Number_of_coefficients Type 1 beta_z 2 Fixed 2 mu_j 2 Random Read 16 records Coefficient_name Number_of_coefficients Type 1 beta_z 24 Fixed 2 mu_j 8 Fixed 3 x_tj 232 Random Read 4 records Coefficient_name Number_of_coefficients Type 1 beta_z 5 Fixed 2 mu_j 4 Random Read 4 records Read 16 records [ FAIL 5 | WARN 12 | SKIP 0 | PASS 4 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-gmrf-versions.R:75:3'): dsem constant-variance options ────── apply(margvar, MARGIN = 2, FUN = sd) not equal to c(0, 0). 2/2 mismatches (average diff: NaN) [1] NA - 0 == NA [2] NA - 0 == NA ── Failure ('test-gmrf-versions.R:94:3'): dsem constant-variance options ────── apply(margvar, MARGIN = 2, FUN = sd) not equal to c(0, 0). 2/2 mismatches (average diff: NaN) [1] NA - 0 == NA [2] NA - 0 == NA ── Error ('test-platform.R:34:3'): dsem example is working ──────────────────── Error in `advector(e2)`: Invalid argument to 'advector' (lost class attribute?) Backtrace: ▆ 1. └─dsem::dsemRTMB(sem = sem, tsdata = tsdata, control = dsem_control(getsd = FALSE)) at test-platform.R:34:3 2. └─RTMB::MakeADFun(...) 3. └─obj$retape() 4. └─RTMB:::MakeADFunObject(...) 5. └─RTMB:::.MakeTape(mapfunc, obj$env$par) 6. └─RTMB (local) f(x) 7. └─dsem (local) func(pl) 8. └─dsem (local) f(p, ...) 9. └─RTMB::dgmrf(...) 10. └─RTMB::Ops.advector(as.vector(x), as.vector(mu)) 11. ├─RTMB:::Arith2(advector(e1), advector(e2), .Generic) 12. └─RTMB::advector(e2) ── Error ('test-platform.R:160:3'): Fixing parameters works ─────────────────── Error in `advector(e2)`: Invalid argument to 'advector' (lost class attribute?) Backtrace: ▆ 1. └─dsem::dsemRTMB(sem = sem, tsdata = tsdata, control = dsem_control(getsd = FALSE)) at test-platform.R:160:3 2. └─RTMB::MakeADFun(...) 3. └─obj$retape() 4. └─RTMB:::MakeADFunObject(...) 5. └─RTMB:::.MakeTape(mapfunc, obj$env$par) 6. └─RTMB (local) f(x) 7. └─dsem (local) func(pl) 8. └─dsem (local) f(p, ...) 9. └─RTMB::dgmrf(...) 10. └─RTMB::Ops.advector(as.vector(x), as.vector(mu)) 11. ├─RTMB:::Arith2(advector(e1), advector(e2), .Generic) 12. └─RTMB::advector(e2) ── Error ('test-priors.R:43:3'): priors interface is working ────────────────── Error in `advector(e2)`: Invalid argument to 'advector' (lost class attribute?) Backtrace: ▆ 1. └─dsem::dsemRTMB(...) at test-priors.R:43:3 2. └─RTMB::MakeADFun(...) 3. └─obj$retape() 4. └─RTMB:::MakeADFunObject(...) 5. └─RTMB:::.MakeTape(mapfunc, obj$env$par) 6. └─RTMB (local) f(x) 7. └─dsem (local) func(pl) 8. └─dsem (local) f(p, ...) 9. └─RTMB::dgmrf(...) 10. └─RTMB::Ops.advector(as.vector(x), as.vector(mu)) 11. ├─RTMB:::Arith2(advector(e1), advector(e2), .Generic) 12. └─RTMB::advector(e2) [ FAIL 5 | WARN 12 | SKIP 0 | PASS 4 ] Error: Test failures Execution halted Flavor: r-oldrel-windows-x86_64