CRAN Package Check Results for Maintainer ‘Davide Chicco <davidechicco at davidechicco.it>’

Last updated on 2025-04-12 22:52:34 CEST.

Package	ERROR	NOTE	OK
DBCVindex			14
geneExpressionFromGEO	2	1	11
SaturnCoefficient			14

Package DBCVindex

Current CRAN status: OK: 14

Package geneExpressionFromGEO

Current CRAN status: ERROR: 2, NOTE: 1, OK: 11

Version: 0.9
Check: examples
Result: ERROR Running examples in ‘geneExpressionFromGEO-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: getGeneExpressionFromGEO > ### Title: Function that reads in the GEO code of a dataset, and returns > ### the gene expression dataframe. > ### Aliases: getGeneExpressionFromGEO > > ### ** Examples > > geneExpressionDF1 <- getGeneExpressionFromGEO("GSE3268", FALSE, FALSE) Error in open.connection(x, "rb") : cannot open the connection Calls: getGeneExpressionFromGEO -> <Anonymous> -> read_html.default Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.2
Check: examples
Result: ERROR Running examples in ‘geneExpressionFromGEO-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: getGeneExpressionFromGEO > ### Title: Function that reads in the GEO code of a dataset, and returns > ### the gene expression dataframe. > ### Aliases: getGeneExpressionFromGEO > > ### ** Examples > > geneExpressionDF1 <- getGeneExpressionFromGEO("GSE47018", FALSE, FALSE) Processed URL: https://ftp.ncbi.nlm.nih.gov/geo/series/ Error in open.connection(x, "rb") : cannot open the connection Calls: getGeneExpressionFromGEO -> <Anonymous> -> read_html.default Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.2
Check: dependencies in R code
Result: NOTE Namespace in Imports field not imported from: ‘qpdf’ All declared Imports should be used. Flavor: r-devel-linux-x86_64-fedora-gcc

Package SaturnCoefficient

Current CRAN status: OK: 14