CRAN Package Check Results for Package cocoon

Last updated on 2025-02-23 15:49:39 CET.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	0.2.0	3.67	56.53	60.20	OK
r-devel-linux-x86_64-debian-gcc	0.2.0	2.94	42.03	44.97	OK
r-devel-linux-x86_64-fedora-clang	0.2.0			97.26	ERROR
r-devel-linux-x86_64-fedora-gcc	0.2.0			107.05	ERROR
r-devel-macos-arm64	0.2.0			31.00	OK
r-devel-macos-x86_64	0.2.0			74.00	OK
r-devel-windows-x86_64	0.2.0	6.00	77.00	83.00	OK
r-patched-linux-x86_64	0.2.0	3.63	54.18	57.81	OK
r-release-linux-x86_64	0.2.0	3.41	53.11	56.52	OK
r-release-macos-arm64	0.2.0			44.00	OK
r-release-macos-x86_64	0.2.0			75.00	OK
r-release-windows-x86_64	0.2.0	5.00	75.00	80.00	OK
r-oldrel-macos-arm64	0.1.0			40.00	OK
r-oldrel-macos-x86_64	0.2.0			84.00	NOTE
r-oldrel-windows-x86_64	0.2.0	7.00	89.00	96.00	NOTE

Check Details

Version: 0.2.0
Check: tests
Result: ERROR Running ‘testthat.R’ [17s/30s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(cocoon) > > test_check("cocoon") [ FAIL 15 | WARN 0 | SKIP 1 | PASS 274 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-format_statvalues.R:64:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-format_stats_lmerModLmerTest.R:55:3'): formatting lm linear models works properly ── format_stats(test_lmer2, "a") (`actual`) not equal to "_β_ = -0.103, SE = 0.310, _t_ = -0.333, _p_ = .748" (`expected`). `actual`: "_β_ = -0.104, SE = 0.310, _t_ = -0.337, _p_ = .745" `expected`: "_β_ = -0.103, SE = 0.310, _t_ = -0.333, _p_ = .748" ── Failure ('test-format_stats_lmerModLmerTest.R:56:3'): formatting lm linear models works properly ── format_stats(test_lmer2, "a", digits = 2) (`actual`) not equal to "_β_ = -0.10, SE = 0.31, _t_ = -0.33, _p_ = .748" (`expected`). `actual`: "_β_ = -0.10, SE = 0.31, _t_ = -0.34, _p_ = .745" `expected`: "_β_ = -0.10, SE = 0.31, _t_ = -0.33, _p_ = .748" ── Failure ('test-format_stats_lmerModLmerTest.R:57:3'): formatting lm linear models works properly ── format_stats(test_lmer2, "a", pdigits = 2) (`actual`) not equal to "_β_ = -0.103, SE = 0.310, _t_ = -0.333, _p_ = .75" (`expected`). `actual`: "_β_ = -0.104, SE = 0.310, _t_ = -0.337, _p_ = .74" `expected`: "_β_ = -0.103, SE = 0.310, _t_ = -0.333, _p_ = .75" ── Failure ('test-format_stats_lmerModLmerTest.R:58:3'): formatting lm linear models works properly ── format_stats(test_lmer2, "a", pzero = TRUE) (`actual`) not equal to "_β_ = -0.103, SE = 0.310, _t_ = -0.333, _p_ = 0.748" (`expected`). `actual`: "_β_ = -0.104, SE = 0.310, _t_ = -0.337, _p_ = 0.745" `expected`: "_β_ = -0.103, SE = 0.310, _t_ = -0.333, _p_ = 0.748" ── Failure ('test-format_stats_lmerModLmerTest.R:59:3'): formatting lm linear models works properly ── format_stats(test_lmer2, "a", full = FALSE) (`actual`) not equal to "_β_ = -0.103, _p_ = .748" (`expected`). `actual`: "_β_ = -0.104, _p_ = .745" `expected`: "_β_ = -0.103, _p_ = .748" ── Failure ('test-format_stats_lmerModLmerTest.R:60:3'): formatting lm linear models works properly ── format_stats(test_lmer2, "a", italics = FALSE) (`actual`) not equal to "β = -0.103, SE = 0.310, t = -0.333, p = .748" (`expected`). `actual`: "β = -0.104, SE = 0.310, t = -0.337, p = .745" `expected`: "β = -0.103, SE = 0.310, t = -0.333, p = .748" ── Failure ('test-format_stats_lmerModLmerTest.R:61:3'): formatting lm linear models works properly ── format_stats(test_lmer2, "a", type = "latex") (`actual`) not equal to "$\\beta$ = -0.103, SE = 0.310, $t$ = -0.333, $p$ = .748" (`expected`). `actual`: "$\\beta$ = -0.104, SE = 0.310, $t$ = -0.337, $p$ = .745" `expected`: "$\\beta$ = -0.103, SE = 0.310, $t$ = -0.333, $p$ = .748" ── Failure ('test-format_stats_merMod.R:59:3'): formatting lm linear models works properly ── format_stats(test_lmer, term = "a") (`actual`) not equal to "_β_ = -0.103, SE = 0.310, _t_ = -0.333" (`expected`). `actual`: "_β_ = -0.104, SE = 0.310, _t_ = -0.337" `expected`: "_β_ = -0.103, SE = 0.310, _t_ = -0.333" ── Failure ('test-format_stats_merMod.R:60:3'): formatting lm linear models works properly ── format_stats(test_lmer, "a", digits = 2) (`actual`) not equal to "_β_ = -0.10, SE = 0.31, _t_ = -0.33" (`expected`). `actual`: "_β_ = -0.10, SE = 0.31, _t_ = -0.34" `expected`: "_β_ = -0.10, SE = 0.31, _t_ = -0.33" ── Failure ('test-format_stats_merMod.R:61:3'): formatting lm linear models works properly ── format_stats(test_lmer, "a", pdigits = 2) (`actual`) not equal to "_β_ = -0.103, SE = 0.310, _t_ = -0.333" (`expected`). `actual`: "_β_ = -0.104, SE = 0.310, _t_ = -0.337" `expected`: "_β_ = -0.103, SE = 0.310, _t_ = -0.333" ── Failure ('test-format_stats_merMod.R:62:3'): formatting lm linear models works properly ── format_stats(test_lmer, "a", pzero = TRUE) (`actual`) not equal to "_β_ = -0.103, SE = 0.310, _t_ = -0.333" (`expected`). `actual`: "_β_ = -0.104, SE = 0.310, _t_ = -0.337" `expected`: "_β_ = -0.103, SE = 0.310, _t_ = -0.333" ── Failure ('test-format_stats_merMod.R:63:3'): formatting lm linear models works properly ── format_stats(test_lmer, "a", full = FALSE) (`actual`) not equal to "_β_ = -0.103" (`expected`). `actual`: "_β_ = -0.104" `expected`: "_β_ = -0.103" ── Failure ('test-format_stats_merMod.R:64:3'): formatting lm linear models works properly ── format_stats(test_lmer, "a", italics = FALSE) (`actual`) not equal to "β = -0.103, SE = 0.310, t = -0.333" (`expected`). `actual`: "β = -0.104, SE = 0.310, t = -0.337" `expected`: "β = -0.103, SE = 0.310, t = -0.333" ── Failure ('test-format_stats_merMod.R:65:3'): formatting lm linear models works properly ── format_stats(test_lmer, "a", type = "latex") (`actual`) not equal to "$\\beta$ = -0.103, SE = 0.310, $t$ = -0.333" (`expected`). `actual`: "$\\beta$ = -0.104, SE = 0.310, $t$ = -0.337" `expected`: "$\\beta$ = -0.103, SE = 0.310, $t$ = -0.333" ── Failure ('test-format_stats_merMod.R:66:3'): formatting lm linear models works properly ── format_stats(test_lmer, "a", type = "latex", dfs = "sub") (`actual`) not equal to "$\\beta$ = -0.103, SE = 0.310, $t$ = -0.333" (`expected`). `actual`: "$\\beta$ = -0.104, SE = 0.310, $t$ = -0.337" `expected`: "$\\beta$ = -0.103, SE = 0.310, $t$ = -0.333" [ FAIL 15 | WARN 0 | SKIP 1 | PASS 274 ] Error: Test failures In addition: Warning messages: 1: In optwrap(optimizer, devfun, getStart(start, rho$pp), lower = rho$lower, : convergence code -2 from nloptwrap: NLOPT_INVALID_ARGS: Invalid arguments (e.g. lower bounds are bigger than upper bounds, an unknown algorithm was specified, etcetera). 2: In checkConv(attr(opt, "derivs"), opt$par, ctrl = control$checkConv, : Model failed to converge with max|grad| = 0.350361 (tol = 0.002, component 1) 3: In optwrap(optimizer, devfun, getStart(start, rho$pp), lower = rho$lower, : convergence code -2 from nloptwrap: NLOPT_INVALID_ARGS: Invalid arguments (e.g. lower bounds are bigger than upper bounds, an unknown algorithm was specified, etcetera). 4: In checkConv(attr(opt, "derivs"), opt$par, ctrl = control$checkConv, : Model failed to converge with max|grad| = 0.350361 (tol = 0.002, component 1) Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.2.0
Check: tests
Result: ERROR Running ‘testthat.R’ [16s/26s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(cocoon) > > test_check("cocoon") [ FAIL 15 | WARN 0 | SKIP 1 | PASS 274 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-format_statvalues.R:64:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-format_stats_lmerModLmerTest.R:55:3'): formatting lm linear models works properly ── format_stats(test_lmer2, "a") (`actual`) not equal to "_β_ = -0.103, SE = 0.310, _t_ = -0.333, _p_ = .748" (`expected`). `actual`: "_β_ = -0.104, SE = 0.310, _t_ = -0.337, _p_ = .745" `expected`: "_β_ = -0.103, SE = 0.310, _t_ = -0.333, _p_ = .748" ── Failure ('test-format_stats_lmerModLmerTest.R:56:3'): formatting lm linear models works properly ── format_stats(test_lmer2, "a", digits = 2) (`actual`) not equal to "_β_ = -0.10, SE = 0.31, _t_ = -0.33, _p_ = .748" (`expected`). `actual`: "_β_ = -0.10, SE = 0.31, _t_ = -0.34, _p_ = .745" `expected`: "_β_ = -0.10, SE = 0.31, _t_ = -0.33, _p_ = .748" ── Failure ('test-format_stats_lmerModLmerTest.R:57:3'): formatting lm linear models works properly ── format_stats(test_lmer2, "a", pdigits = 2) (`actual`) not equal to "_β_ = -0.103, SE = 0.310, _t_ = -0.333, _p_ = .75" (`expected`). `actual`: "_β_ = -0.104, SE = 0.310, _t_ = -0.337, _p_ = .74" `expected`: "_β_ = -0.103, SE = 0.310, _t_ = -0.333, _p_ = .75" ── Failure ('test-format_stats_lmerModLmerTest.R:58:3'): formatting lm linear models works properly ── format_stats(test_lmer2, "a", pzero = TRUE) (`actual`) not equal to "_β_ = -0.103, SE = 0.310, _t_ = -0.333, _p_ = 0.748" (`expected`). `actual`: "_β_ = -0.104, SE = 0.310, _t_ = -0.337, _p_ = 0.745" `expected`: "_β_ = -0.103, SE = 0.310, _t_ = -0.333, _p_ = 0.748" ── Failure ('test-format_stats_lmerModLmerTest.R:59:3'): formatting lm linear models works properly ── format_stats(test_lmer2, "a", full = FALSE) (`actual`) not equal to "_β_ = -0.103, _p_ = .748" (`expected`). `actual`: "_β_ = -0.104, _p_ = .745" `expected`: "_β_ = -0.103, _p_ = .748" ── Failure ('test-format_stats_lmerModLmerTest.R:60:3'): formatting lm linear models works properly ── format_stats(test_lmer2, "a", italics = FALSE) (`actual`) not equal to "β = -0.103, SE = 0.310, t = -0.333, p = .748" (`expected`). `actual`: "β = -0.104, SE = 0.310, t = -0.337, p = .745" `expected`: "β = -0.103, SE = 0.310, t = -0.333, p = .748" ── Failure ('test-format_stats_lmerModLmerTest.R:61:3'): formatting lm linear models works properly ── format_stats(test_lmer2, "a", type = "latex") (`actual`) not equal to "$\\beta$ = -0.103, SE = 0.310, $t$ = -0.333, $p$ = .748" (`expected`). `actual`: "$\\beta$ = -0.104, SE = 0.310, $t$ = -0.337, $p$ = .745" `expected`: "$\\beta$ = -0.103, SE = 0.310, $t$ = -0.333, $p$ = .748" ── Failure ('test-format_stats_merMod.R:59:3'): formatting lm linear models works properly ── format_stats(test_lmer, term = "a") (`actual`) not equal to "_β_ = -0.103, SE = 0.310, _t_ = -0.333" (`expected`). `actual`: "_β_ = -0.104, SE = 0.310, _t_ = -0.337" `expected`: "_β_ = -0.103, SE = 0.310, _t_ = -0.333" ── Failure ('test-format_stats_merMod.R:60:3'): formatting lm linear models works properly ── format_stats(test_lmer, "a", digits = 2) (`actual`) not equal to "_β_ = -0.10, SE = 0.31, _t_ = -0.33" (`expected`). `actual`: "_β_ = -0.10, SE = 0.31, _t_ = -0.34" `expected`: "_β_ = -0.10, SE = 0.31, _t_ = -0.33" ── Failure ('test-format_stats_merMod.R:61:3'): formatting lm linear models works properly ── format_stats(test_lmer, "a", pdigits = 2) (`actual`) not equal to "_β_ = -0.103, SE = 0.310, _t_ = -0.333" (`expected`). `actual`: "_β_ = -0.104, SE = 0.310, _t_ = -0.337" `expected`: "_β_ = -0.103, SE = 0.310, _t_ = -0.333" ── Failure ('test-format_stats_merMod.R:62:3'): formatting lm linear models works properly ── format_stats(test_lmer, "a", pzero = TRUE) (`actual`) not equal to "_β_ = -0.103, SE = 0.310, _t_ = -0.333" (`expected`). `actual`: "_β_ = -0.104, SE = 0.310, _t_ = -0.337" `expected`: "_β_ = -0.103, SE = 0.310, _t_ = -0.333" ── Failure ('test-format_stats_merMod.R:63:3'): formatting lm linear models works properly ── format_stats(test_lmer, "a", full = FALSE) (`actual`) not equal to "_β_ = -0.103" (`expected`). `actual`: "_β_ = -0.104" `expected`: "_β_ = -0.103" ── Failure ('test-format_stats_merMod.R:64:3'): formatting lm linear models works properly ── format_stats(test_lmer, "a", italics = FALSE) (`actual`) not equal to "β = -0.103, SE = 0.310, t = -0.333" (`expected`). `actual`: "β = -0.104, SE = 0.310, t = -0.337" `expected`: "β = -0.103, SE = 0.310, t = -0.333" ── Failure ('test-format_stats_merMod.R:65:3'): formatting lm linear models works properly ── format_stats(test_lmer, "a", type = "latex") (`actual`) not equal to "$\\beta$ = -0.103, SE = 0.310, $t$ = -0.333" (`expected`). `actual`: "$\\beta$ = -0.104, SE = 0.310, $t$ = -0.337" `expected`: "$\\beta$ = -0.103, SE = 0.310, $t$ = -0.333" ── Failure ('test-format_stats_merMod.R:66:3'): formatting lm linear models works properly ── format_stats(test_lmer, "a", type = "latex", dfs = "sub") (`actual`) not equal to "$\\beta$ = -0.103, SE = 0.310, $t$ = -0.333" (`expected`). `actual`: "$\\beta$ = -0.104, SE = 0.310, $t$ = -0.337" `expected`: "$\\beta$ = -0.103, SE = 0.310, $t$ = -0.333" [ FAIL 15 | WARN 0 | SKIP 1 | PASS 274 ] Error: Test failures In addition: Warning messages: 1: In optwrap(optimizer, devfun, getStart(start, rho$pp), lower = rho$lower, : convergence code -2 from nloptwrap: NLOPT_INVALID_ARGS: Invalid arguments (e.g. lower bounds are bigger than upper bounds, an unknown algorithm was specified, etcetera). 2: In checkConv(attr(opt, "derivs"), opt$par, ctrl = control$checkConv, : Model failed to converge with max|grad| = 0.350361 (tol = 0.002, component 1) 3: In optwrap(optimizer, devfun, getStart(start, rho$pp), lower = rho$lower, : convergence code -2 from nloptwrap: NLOPT_INVALID_ARGS: Invalid arguments (e.g. lower bounds are bigger than upper bounds, an unknown algorithm was specified, etcetera). 4: In checkConv(attr(opt, "derivs"), opt$par, ctrl = control$checkConv, : Model failed to converge with max|grad| = 0.350361 (tol = 0.002, component 1) Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.2.0
Check: R code for possible problems
Result: NOTE .stop_not_number: no visible global function definition for ‘%||%’ Undefined global functions or variables: %||% Flavors: r-oldrel-macos-x86_64, r-oldrel-windows-x86_64