CRAN Package Check Results for Package cmmr

Last updated on 2024-07-17 19:55:40 CEST.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	0.1.2	2.35	26.20	28.55	NOTE
r-devel-linux-x86_64-debian-gcc	0.1.2	1.89	19.10	20.99	NOTE
r-devel-linux-x86_64-fedora-clang	0.1.2			34.98	NOTE
r-devel-linux-x86_64-fedora-gcc	0.1.2			33.06	NOTE
r-devel-windows-x86_64	0.1.2	4.00	46.00	50.00	NOTE
r-patched-linux-x86_64	0.1.2	2.17	25.42	27.59	NOTE
r-release-linux-x86_64	0.1.2	1.89	24.54	26.43	NOTE
r-release-macos-arm64	0.1.2			24.00	NOTE
r-release-macos-x86_64	0.1.2			34.00	ERROR
r-release-windows-x86_64	0.1.2	3.00	552.00	555.00	NOTE
r-oldrel-macos-arm64	0.1.2			24.00	NOTE
r-oldrel-macos-x86_64	0.1.2			28.00	NOTE
r-oldrel-windows-x86_64	0.1.2	4.00	46.00	50.00	NOTE

Check Details

Version: 0.1.2
Check: LazyData
Result: NOTE 'LazyData' is specified without a 'data' directory Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 0.1.2
Check: examples
Result: ERROR Running examples in ‘cmmr-Ex.R’ failed The error most likely occurred in: > ### Name: advanced_batch_search > ### Title: Encapsulation of CEU Mass Mediator advanced batch search API. > ### Aliases: advanced_batch_search > > ### ** Examples > > df <- advanced_batch_search( + cmm_url = paste0( + 'http://ceumass.eps.uspceu.es/mediator/api/v3/', + 'advancedbatch'), + chemical_alphabet = 'all', + modifiers_type = 'none', + metabolites_type = 'all-except-peptides', + databases = '["hmdb"]', + masses_mode = 'mz', + ion_mode = 'positive', + adducts = '["all"]', + deuterium = 'false', + tolerance = '7.5', + tolerance_mode = 'ppm', + masses = '[400.3432, 288.2174]', + all_masses = '[]', + retention_times = '[18.842525, 4.021555]', + all_retention_times = '[]', + composite_spectra = paste0( + '[[{ "mz": 400.3432, "intensity": 307034.88 }, ', + '{ "mz": 311.20145, "intensity": 400.03336 }]]' + )) Using the CEU Mass Mediator server API. Error in curl::curl_fetch_memory(url, handle = handle) : Timeout was reached: [ceumass.eps.uspceu.es] Resolving timed out after 10007 milliseconds Calls: advanced_batch_search ... request_fetch -> request_fetch.write_memory -> <Anonymous> Execution halted Flavor: r-release-macos-x86_64