Last updated on 2025-01-22 12:59:39 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.0 | 6.18 | 156.22 | 162.40 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.0 | 4.08 | 108.84 | 112.92 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.1.1 | 276.27 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.1 | 272.87 | NOTE | |||
| r-devel-windows-x86_64 | 0.1.1 | 7.00 | 158.00 | 165.00 | OK | |
| r-patched-linux-x86_64 | 0.1.0 | 6.39 | 145.63 | 152.02 | OK | |
| r-release-linux-x86_64 | 0.1.0 | 6.36 | 146.65 | 153.01 | OK | |
| r-release-macos-arm64 | 0.1.0 | 79.00 | OK | |||
| r-release-macos-x86_64 | 0.1.1 | 180.00 | OK | |||
| r-release-windows-x86_64 | 0.1.0 | 8.00 | 158.00 | 166.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.0 | 47.00 | ERROR | |||
| r-oldrel-macos-x86_64 | 0.1.0 | 82.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 0.1.1 | 7.00 | 201.00 | 208.00 | OK |
Version: 0.1.1
Check: DESCRIPTION meta-information
Result: NOTE
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘pair_methods.R’ ‘pair_scagnostics.R’ ‘pairwise.R’ ‘pairwise_multi.R’
‘pairwise_scores.R’ ‘plot_pairwise.R’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.1.0
Check: R code for possible problems
Result: NOTE
pairwise.matrix: no visible global function definition for ‘%||%’
Undefined global functions or variables:
%||%
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 0.1.0
Check: examples
Result: ERROR
Running examples in ‘bullseye-Ex.R’ failed
The error most likely occurred in:
> ### Name: pair_ace
> ### Title: Alternating conditional expectations correlation
> ### Aliases: pair_ace
>
> ### ** Examples
>
> pair_ace(iris)
Error in rownames(m) %||% paste0("V", seq_along(xindex)) :
could not find function "%||%"
Calls: pair_ace -> pairwise -> pairwise.data.frame -> pairwise.matrix
Execution halted
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [3s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(bullseye)
>
> test_check("bullseye")
[ FAIL 20 | WARN 0 | SKIP 0 | PASS 0 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-pair_methods.R:3:3'): pair cor ─────────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_cor(iris[c(1, 2, 51, 52, 53), ]) at test-pair_methods.R:3:3
2. ├─bullseye::pairwise(dcor, score = method, pair_type = "nn")
3. └─bullseye:::pairwise.matrix(dcor, score = method, pair_type = "nn")
── Error ('test-pair_methods.R:9:3'): pair cancor ──────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_cancor(iris[1:4, ]) at test-pair_methods.R:9:3
2. ├─bullseye::pairwise(d, score = "cancor")
3. └─bullseye:::pairwise.data.frame(d, score = "cancor")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:16:5'): pair dcor ───────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_dcor(iris[1:4, ]) at test-pair_methods.R:16:5
2. ├─bullseye::pairwise(d, score = "dcor", pair_type = "nn")
3. └─bullseye:::pairwise.data.frame(d, score = "dcor", pair_type = "nn")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:24:3'): pair mine ───────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_mine(iris[c(1, 2, 51, 52, 53), ]) at test-pair_methods.R:24:3
2. ├─bullseye::pairwise(...)
3. └─bullseye:::pairwise.matrix(...)
── Error ('test-pair_methods.R:31:3'): pair nmi ────────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_nmi(iris[1:4, ]) at test-pair_methods.R:31:3
2. ├─bullseye::pairwise(d, score = "nmi")
3. └─bullseye:::pairwise.data.frame(d, score = "nmi")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:39:3'): pair polychor ───────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_polychor(droplevels(iris1)) at test-pair_methods.R:39:3
2. ├─bullseye::pairwise(d, score = "polychor", pair_type = "ff")
3. └─bullseye:::pairwise.data.frame(d, score = "polychor", pair_type = "ff")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:47:3'): pair polyserial ─────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_polyserial(droplevels(iris1)) at test-pair_methods.R:47:3
2. ├─bullseye::pairwise(d, score = "polyserial")
3. └─bullseye:::pairwise.data.frame(d, score = "polyserial")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:57:3'): pair tau ────────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_tauB(iris1) at test-pair_methods.R:57:3
2. └─bullseye:::pair_tau(d, method = "B", ...)
3. ├─bullseye::pairwise(d, score = paste0("tau", method), pair_type = "ff")
4. └─bullseye:::pairwise.data.frame(...)
5. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:76:3'): pair uncertainty ────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_uncertainty(droplevels(iris1)) at test-pair_methods.R:76:3
2. ├─bullseye::pairwise(d, score = "uncertainty", pair_type = "ff")
3. └─bullseye:::pairwise.data.frame(d, score = "uncertainty", pair_type = "ff")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:85:3'): pair gkTau ──────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_gkTau(droplevels(iris1)) at test-pair_methods.R:85:3
2. ├─bullseye::pairwise(d, score = "gkTau", pair_type = "ff")
3. └─bullseye:::pairwise.data.frame(d, score = "gkTau", pair_type = "ff")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:95:3'): pair gkGamma ────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_gkGamma(droplevels(iris1)) at test-pair_methods.R:95:3
2. ├─bullseye::pairwise(d, score = "gkGamma", pair_type = "ff")
3. └─bullseye:::pairwise.data.frame(d, score = "gkGamma", pair_type = "ff")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:104:3'): pair chi ───────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_chi(droplevels(iris1)) at test-pair_methods.R:104:3
2. ├─bullseye::pairwise(d, score = "chi", pair_type = "ff")
3. └─bullseye:::pairwise.data.frame(d, score = "chi", pair_type = "ff")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:111:3'): pair ace ───────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_ace(iris[c(1, 2, 53, 55), ]) at test-pair_methods.R:111:3
2. ├─bullseye::pairwise(d, score = "ace")
3. └─bullseye:::pairwise.data.frame(d, score = "ace")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:118:3'): pair multi ─────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pairwise_multi(iris, scores = c("pair_cor", "pair_cancor")) at test-pair_methods.R:118:3
2. ├─base::do.call(what = get(scores[i]), args = list(d = d, handle.na = handle.na))
3. └─bullseye (local) `<fn>`(d = `<df[,5]>`, handle.na = TRUE)
4. ├─bullseye::pairwise(dcor, score = method, pair_type = "nn")
5. └─bullseye:::pairwise.matrix(dcor, score = method, pair_type = "nn")
── Error ('test-pair_scagnostics.R:4:3'): pair scagnostics ─────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_scagnostics(...) at test-pair_scagnostics.R:4:3
2. ├─bullseye::pairwise(d, score = sel_scag[1], pair_type = "nn")
3. └─bullseye:::pairwise.data.frame(d, score = sel_scag[1], pair_type = "nn")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_scores.R:5:3'): pairwise scores ───────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pairwise_scores(iris[c(1, 2, 53, 55), ]) at test-pair_scores.R:5:3
2. ├─base::do.call(get(entry$funName), list(dsub, handle.na = handle.na))
3. └─bullseye (local) `<fn>`(`<df[,5]>`, handle.na = TRUE)
4. ├─bullseye::pairwise(d, score = "cancor")
5. └─bullseye:::pairwise.data.frame(d, score = "cancor")
6. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pairwise.R:4:3'): pairwise ─────────────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. ├─bullseye::pairwise(iris[, 1:4]) at test-pairwise.R:4:3
2. └─bullseye:::pairwise.data.frame(iris[, 1:4])
3. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pairwise.R:10:3'): pairwise from matrix ────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. ├─bullseye::pairwise(cor(iris[, 1:4])) at test-pairwise.R:10:3
2. └─bullseye:::pairwise.matrix(cor(iris[, 1:4]))
── Error ('test-plot_pairwise.R:4:3'): plot pairwise ───────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. ├─bullseye::plot_pairwise(pairwise(iris[1:4, ])) at test-plot_pairwise.R:4:3
2. │ └─bullseye:::check_pairwise(scores)
3. ├─bullseye::pairwise(iris[1:4, ])
4. └─bullseye:::pairwise.data.frame(iris[1:4, ])
5. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-plot_pairwise.R:9:3'): plot pairwise linear ────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. ├─bullseye::plot_pairwise_linear(pairwise(iris[1:4, ])) at test-plot_pairwise.R:9:3
2. │ └─bullseye:::check_pairwise(scores)
3. ├─bullseye::pairwise(iris[1:4, ])
4. └─bullseye:::pairwise.data.frame(iris[1:4, ])
5. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
[ FAIL 20 | WARN 0 | SKIP 0 | PASS 0 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-arm64
Version: 0.1.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘calc_pairwise.Rmd’ using rmarkdown
Quitting from lines 44-46 [unnamed-chunk-3] (calc_pairwise.Rmd)
Error: processing vignette 'calc_pairwise.Rmd' failed with diagnostics:
could not find function "%||%"
--- failed re-building ‘calc_pairwise.Rmd’
--- re-building ‘integrating.Rmd’ using rmarkdown
Quitting from lines 57-62 [corrplot_assoc] (integrating.Rmd)
Error: processing vignette 'integrating.Rmd' failed with diagnostics:
could not find function "%||%"
--- failed re-building ‘integrating.Rmd’
--- re-building ‘vis_pairwise.Rmd’ using rmarkdown
Quitting from lines 52-53 [unnamed-chunk-3] (vis_pairwise.Rmd)
Error: processing vignette 'vis_pairwise.Rmd' failed with diagnostics:
could not find function "%||%"
--- failed re-building ‘vis_pairwise.Rmd’
SUMMARY: processing the following files failed:
‘calc_pairwise.Rmd’ ‘integrating.Rmd’ ‘vis_pairwise.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-macos-arm64
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [4s/5s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(bullseye)
>
> test_check("bullseye")
[ FAIL 20 | WARN 0 | SKIP 0 | PASS 0 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-pair_methods.R:3:3'): pair cor ─────────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_cor(iris[c(1, 2, 51, 52, 53), ]) at test-pair_methods.R:3:3
2. ├─bullseye::pairwise(dcor, score = method, pair_type = "nn")
3. └─bullseye:::pairwise.matrix(dcor, score = method, pair_type = "nn")
── Error ('test-pair_methods.R:9:3'): pair cancor ──────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_cancor(iris[1:4, ]) at test-pair_methods.R:9:3
2. ├─bullseye::pairwise(d, score = "cancor")
3. └─bullseye:::pairwise.data.frame(d, score = "cancor")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:16:5'): pair dcor ───────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_dcor(iris[1:4, ]) at test-pair_methods.R:16:5
2. ├─bullseye::pairwise(d, score = "dcor", pair_type = "nn")
3. └─bullseye:::pairwise.data.frame(d, score = "dcor", pair_type = "nn")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:24:3'): pair mine ───────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_mine(iris[c(1, 2, 51, 52, 53), ]) at test-pair_methods.R:24:3
2. ├─bullseye::pairwise(...)
3. └─bullseye:::pairwise.matrix(...)
── Error ('test-pair_methods.R:31:3'): pair nmi ────────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_nmi(iris[1:4, ]) at test-pair_methods.R:31:3
2. ├─bullseye::pairwise(d, score = "nmi")
3. └─bullseye:::pairwise.data.frame(d, score = "nmi")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:39:3'): pair polychor ───────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_polychor(droplevels(iris1)) at test-pair_methods.R:39:3
2. ├─bullseye::pairwise(d, score = "polychor", pair_type = "ff")
3. └─bullseye:::pairwise.data.frame(d, score = "polychor", pair_type = "ff")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:47:3'): pair polyserial ─────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_polyserial(droplevels(iris1)) at test-pair_methods.R:47:3
2. ├─bullseye::pairwise(d, score = "polyserial")
3. └─bullseye:::pairwise.data.frame(d, score = "polyserial")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:57:3'): pair tau ────────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_tauB(iris1) at test-pair_methods.R:57:3
2. └─bullseye:::pair_tau(d, method = "B", ...)
3. ├─bullseye::pairwise(d, score = paste0("tau", method), pair_type = "ff")
4. └─bullseye:::pairwise.data.frame(...)
5. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:76:3'): pair uncertainty ────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_uncertainty(droplevels(iris1)) at test-pair_methods.R:76:3
2. ├─bullseye::pairwise(d, score = "uncertainty", pair_type = "ff")
3. └─bullseye:::pairwise.data.frame(d, score = "uncertainty", pair_type = "ff")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:85:3'): pair gkTau ──────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_gkTau(droplevels(iris1)) at test-pair_methods.R:85:3
2. ├─bullseye::pairwise(d, score = "gkTau", pair_type = "ff")
3. └─bullseye:::pairwise.data.frame(d, score = "gkTau", pair_type = "ff")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:95:3'): pair gkGamma ────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_gkGamma(droplevels(iris1)) at test-pair_methods.R:95:3
2. ├─bullseye::pairwise(d, score = "gkGamma", pair_type = "ff")
3. └─bullseye:::pairwise.data.frame(d, score = "gkGamma", pair_type = "ff")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:104:3'): pair chi ───────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_chi(droplevels(iris1)) at test-pair_methods.R:104:3
2. ├─bullseye::pairwise(d, score = "chi", pair_type = "ff")
3. └─bullseye:::pairwise.data.frame(d, score = "chi", pair_type = "ff")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:111:3'): pair ace ───────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_ace(iris[c(1, 2, 53, 55), ]) at test-pair_methods.R:111:3
2. ├─bullseye::pairwise(d, score = "ace")
3. └─bullseye:::pairwise.data.frame(d, score = "ace")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_methods.R:118:3'): pair multi ─────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pairwise_multi(iris, scores = c("pair_cor", "pair_cancor")) at test-pair_methods.R:118:3
2. ├─base::do.call(what = get(scores[i]), args = list(d = d, handle.na = handle.na))
3. └─bullseye (local) `<fn>`(d = `<df[,5]>`, handle.na = TRUE)
4. ├─bullseye::pairwise(dcor, score = method, pair_type = "nn")
5. └─bullseye:::pairwise.matrix(dcor, score = method, pair_type = "nn")
── Error ('test-pair_scagnostics.R:4:3'): pair scagnostics ─────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pair_scagnostics(...) at test-pair_scagnostics.R:4:3
2. ├─bullseye::pairwise(d, score = sel_scag[1], pair_type = "nn")
3. └─bullseye:::pairwise.data.frame(d, score = sel_scag[1], pair_type = "nn")
4. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pair_scores.R:5:3'): pairwise scores ───────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. └─bullseye::pairwise_scores(iris[c(1, 2, 53, 55), ]) at test-pair_scores.R:5:3
2. ├─base::do.call(get(entry$funName), list(dsub, handle.na = handle.na))
3. └─bullseye (local) `<fn>`(`<df[,5]>`, handle.na = TRUE)
4. ├─bullseye::pairwise(d, score = "cancor")
5. └─bullseye:::pairwise.data.frame(d, score = "cancor")
6. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pairwise.R:4:3'): pairwise ─────────────────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. ├─bullseye::pairwise(iris[, 1:4]) at test-pairwise.R:4:3
2. └─bullseye:::pairwise.data.frame(iris[, 1:4])
3. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-pairwise.R:10:3'): pairwise from matrix ────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. ├─bullseye::pairwise(cor(iris[, 1:4])) at test-pairwise.R:10:3
2. └─bullseye:::pairwise.matrix(cor(iris[, 1:4]))
── Error ('test-plot_pairwise.R:4:3'): plot pairwise ───────────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. ├─bullseye::plot_pairwise(pairwise(iris[1:4, ])) at test-plot_pairwise.R:4:3
2. │ └─bullseye:::check_pairwise(scores)
3. ├─bullseye::pairwise(iris[1:4, ])
4. └─bullseye:::pairwise.data.frame(iris[1:4, ])
5. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
── Error ('test-plot_pairwise.R:9:3'): plot pairwise linear ────────────────────
Error in `rownames(m) %||% paste0("V", seq_along(xindex))`: could not find function "%||%"
Backtrace:
▆
1. ├─bullseye::plot_pairwise_linear(pairwise(iris[1:4, ])) at test-plot_pairwise.R:9:3
2. │ └─bullseye:::check_pairwise(scores)
3. ├─bullseye::pairwise(iris[1:4, ])
4. └─bullseye:::pairwise.data.frame(iris[1:4, ])
5. └─bullseye:::pairwise.matrix(dcor, score = score, pair_type = pair_type)
[ FAIL 20 | WARN 0 | SKIP 0 | PASS 0 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64
Version: 0.1.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘calc_pairwise.Rmd’ using rmarkdown
Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed.
Quitting from lines 44-46 [unnamed-chunk-3] (calc_pairwise.Rmd)
Error: processing vignette 'calc_pairwise.Rmd' failed with diagnostics:
could not find function "%||%"
--- failed re-building ‘calc_pairwise.Rmd’
--- re-building ‘integrating.Rmd’ using rmarkdown
Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed.
Quitting from lines 57-62 [corrplot_assoc] (integrating.Rmd)
Error: processing vignette 'integrating.Rmd' failed with diagnostics:
could not find function "%||%"
--- failed re-building ‘integrating.Rmd’
--- re-building ‘vis_pairwise.Rmd’ using rmarkdown
Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed.
Quitting from lines 52-53 [unnamed-chunk-3] (vis_pairwise.Rmd)
Error: processing vignette 'vis_pairwise.Rmd' failed with diagnostics:
could not find function "%||%"
--- failed re-building ‘vis_pairwise.Rmd’
SUMMARY: processing the following files failed:
‘calc_pairwise.Rmd’ ‘integrating.Rmd’ ‘vis_pairwise.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-macos-x86_64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.