Last updated on 2025-08-22 13:49:11 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1-3 | 6.11 | 59.42 | 65.53 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.1-3 | 5.60 | 45.85 | 51.45 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1-3 | 103.68 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1-3 | 102.30 | OK | |||
| r-devel-windows-x86_64 | 1.1-3 | 8.00 | 83.00 | 91.00 | OK | |
| r-patched-linux-x86_64 | 1.1-3 | 7.49 | 56.80 | 64.29 | OK | |
| r-release-linux-x86_64 | 1.1-3 | 6.78 | 57.11 | 63.89 | OK | |
| r-release-macos-arm64 | 1.1-3 | 43.00 | OK | |||
| r-release-macos-x86_64 | 1.1-3 | 66.00 | OK | |||
| r-release-windows-x86_64 | 1.1-3 | 8.00 | 84.00 | 92.00 | OK | |
| r-oldrel-macos-arm64 | 1.1-3 | 43.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1-3 | 74.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.1-3 | 10.00 | 108.00 | 118.00 | OK |
Version: 1.1-3
Check: examples
Result: ERROR
Running examples in ‘betaper-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: cca_pertables
> ### Title: Function to assess the efects of taxonomic uncertainty on
> ### [Partial] Constrained Correspondence Analysis
> ### Aliases: cca_pertables plot.cca_pertables print.cca_pertables
> ### Keywords: multivariate
>
> ### ** Examples
>
>
>
> data(Amazonia)
> data(soils)
>
> # Define a new index that includes the terms used in the \code{Amazonia} dataset to define
> # undetermined taxa at different taxonomic levels
>
> index.Amazon <- c(paste("sp.", rep(1:20), sep=""), "Indet.", "indet.")
>
> # Generate a pertables object (i.e. a list of biological data tables simulated from taxonomic
> # uncertainty)
> ## Not run:
> ##D
> ##D Amazonia100 <- pertables(Amazonia, index=index.Amazon, nsim=100)
> ##D
> ##D # Assess the effects of taxonomic uncertainty on a CCA analysis of biological data explained
> ##D # by all the environmental variables of the soil data:
> ##D
> ##D Amazonia.cca <- cca_pertables(Amazonia100 ~., data=soils)
> ##D
> ##D Amazonia.cca
> ##D
> ##D plot(Amazonia.cca)
> ## End(Not run)
> # Fast example for Rcheck
>
> Amazonia4.p2 <- pertables.p2(Amazonia[1:50,], index=index.Amazon, nsim=4, ncl=2, iseed=4)
Error in serverSocket(port = port) :
creation of server socket failed: port 11949 cannot be opened
Calls: pertables.p2 -> makeCluster -> makePSOCKcluster -> serverSocket
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.