CRAN Package Check Results for Maintainer ‘Ben Goodrich <benjamin.goodrich at columbia.edu>’

Last updated on 2024-08-16 21:49:24 CEST.

Package	ERROR	NOTE	OK
mi		10	3
migui			13
rstan		13
rstanarm		13
StanHeaders	2	11

Package mi

Current CRAN status: NOTE: 10, OK: 3

Version: 1.1
Check: Rd files
Result: NOTE checkRd: (-1) rdata.frame.Rd:132: Lost braces in \enumerate; \value handles \item{}{} directly checkRd: (-1) rdata.frame.Rd:133-134: Lost braces in \enumerate; \value handles \item{}{} directly checkRd: (-1) rdata.frame.Rd:135-137: Lost braces in \enumerate; \value handles \item{}{} directly checkRd: (-1) rdata.frame.Rd:138-139: Lost braces in \enumerate; \value handles \item{}{} directly checkRd: (-1) rdata.frame.Rd:144: Lost braces in \enumerate; \value handles \item{}{} directly checkRd: (-1) rdata.frame.Rd:145-147: Lost braces in \enumerate; \value handles \item{}{} directly checkRd: (-1) rdata.frame.Rd:148-150: Lost braces in \enumerate; \value handles \item{}{} directly Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Version: 1.1
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: 02missing_data.frame.Rd: bayesglm get_parameters.Rd: polr mi2stata.Rd: write.dta Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Package migui

Current CRAN status: OK: 13

Package rstan

Current CRAN status: NOTE: 13

Version: 2.32.6
Check: for GNU extensions in Makefiles
Result: NOTE GNU make is a SystemRequirements. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 2.32.6
Check: installed package size
Result: NOTE installed size is 6.5Mb sub-directories of 1Mb or more: exec 1.7Mb lib 2.2Mb Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 2.32.6
Check: Rd cross-references
Result: NOTE Undeclared package ‘rstanarm’ in Rd xrefs Flavor: r-devel-linux-x86_64-fedora-clang

Package rstanarm

Current CRAN status: NOTE: 13

Version: 2.32.1
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: launch_shinystan.stanreg.Rd: shinystan-package loo.stanreg.Rd: loo-package plot.stanreg.Rd: bayesplot pp_check.stanreg.Rd: bayesplot stan_betareg.Rd: stanfit-class stan_glm.Rd: stanfit-class stan_lm.Rd: stanfit-class stan_polr.Rd: stanfit-class Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 2.32.1
Check: for GNU extensions in Makefiles
Result: NOTE GNU make is a SystemRequirements. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 2.32.1
Check: installed package size
Result: NOTE installed size is 27.8Mb sub-directories of 1Mb or more: R 1.8Mb doc 4.8Mb libs 20.4Mb Flavors: r-devel-linux-x86_64-fedora-clang, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 2.32.1
Flags: --no-examples --no-tests --no-vignettes
Check: installed package size
Result: NOTE installed size is 19.9Mb sub-directories of 1Mb or more: R 1.8Mb doc 4.7Mb libs 12.6Mb Flavors: r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64

Version: 2.32.1
Flags: --no-examples --no-tests --no-vignettes
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: launch_shinystan.stanreg.Rd: shinystan-package loo.stanreg.Rd: loo-package plot.stanreg.Rd: bayesplot pp_check.stanreg.Rd: bayesplot stan_betareg.Rd: stanfit-class stan_glm.Rd: stanfit-class stan_lm.Rd: stanfit-class stan_polr.Rd: stanfit-class Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavor: r-devel-windows-x86_64

Version: 2.32.1
Flags: --no-examples --no-tests --no-vignettes
Check: for GNU extensions in Makefiles
Result: NOTE GNU make is a SystemRequirements. Flavors: r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64

Package StanHeaders

Current CRAN status: ERROR: 2, NOTE: 11

Version: 2.32.10
Check: for GNU extensions in Makefiles
Result: NOTE GNU make is a SystemRequirements. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 2.32.10
Check: installed package size
Result: NOTE installed size is 15.4Mb sub-directories of 1Mb or more: include 12.0Mb lib 1.4Mb Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 2.32.10
Check: running R code from vignettes
Result: ERROR Errors in running code in vignettes: when running code in ‘stanmath.Rmd’ ... > Sys.setenv(PKG_LIBS = paste0(StanHeaders:::LdFlags(as_character = TRUE), + " -L", shQuote(SH), " -lStanHeaders")) > x <- optim(rnorm(3), fn = f, gr = g, a = 1:3, method = "BFGS", + hessian = TRUE) When sourcing 'stanmath.R': Error: object 'g' not found Execution halted ‘stanmath.Rmd’ using ‘UTF-8’... failed Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64