CRAN Package Check Results for Package admiralmetabolic

Last updated on 2026-01-19 07:51:37 CET.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	0.2.0	5.80	94.54	100.34	NOTE
r-devel-linux-x86_64-debian-gcc	0.2.0	4.56	66.32	70.88	NOTE
r-devel-linux-x86_64-fedora-clang	0.2.0	11.00	136.87	147.87	OK
r-devel-linux-x86_64-fedora-gcc	0.2.0	13.00	165.58	178.58	OK
r-devel-windows-x86_64	0.2.0	8.00	92.00	100.00	OK
r-patched-linux-x86_64	0.2.0	5.82	77.79	83.61	OK
r-release-linux-x86_64	0.2.0	5.99	78.81	84.80	OK
r-release-macos-arm64	0.2.0				OK
r-release-macos-x86_64	0.2.0	4.00	89.00	93.00	OK
r-release-windows-x86_64	0.2.0	8.00	91.00	99.00	ERROR
r-oldrel-macos-arm64	0.2.0				OK
r-oldrel-macos-x86_64	0.2.0	4.00	88.00	92.00	OK
r-oldrel-windows-x86_64	0.2.0	12.00	123.00	135.00	OK

Check Details

Version: 0.2.0
Check: relative paths in package URLs
Result: NOTE Found the following (possibly) invalid URL: URL: ../reference/index.html From: inst/doc/admiralmetabolic.html Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.2.0
Check: examples
Result: ERROR Running examples in 'admiralmetabolic-Ex.R' failed The error most likely occurred in: > ### Name: derive_param_waisthgt > ### Title: Adds a Parameter for Waist to Height Ratio > ### Aliases: derive_param_waisthgt > ### Keywords: der_prm_advs > > ### ** Examples > > library(tibble) > library(rlang) > > # Example 1: Derive Waist to Height Ratio where Height is measured only once > > advs <- tribble( + ~USUBJID, ~PARAMCD, ~PARAM, ~AVAL, ~AVALU, ~VISIT, + "01-101-1001", "HEIGHT", "Height (cm)", 147, "cm", "SCREENING", + "01-101-1001", "WSTCIR", "Waist Circumference (cm)", 110, "cm", "SCREENING", + "01-101-1001", "WSTCIR", "Waist Circumference (cm)", 108, "cm", "WEEK 2", + "01-101-1001", "WSTCIR", "Waist Circumference (cm)", 107, "cm", "WEEK 3", + "01-101-1002", "HEIGHT", "Height (cm)", 163, "cm", "SCREENING", + "01-101-1002", "WSTCIR", "Waist Circumference (cm)", 120, "cm", "SCREENING", + "01-101-1002", "WSTCIR", "Waist Circumference (cm)", 118, "cm", "WEEK 2", + "01-101-1002", "WSTCIR", "Waist Circumference (cm)", 117, "cm", "WEEK 3", + ) > > derive_param_waisthgt( + advs, + by_vars = exprs(USUBJID, VISIT), + wstcir_code = "WSTCIR", + height_code = "HEIGHT", + set_values_to = exprs( + PARAMCD = "WAISTHGT", + PARAM = "Waist to Height Ratio" + ), + constant_by_vars = exprs(USUBJID), + get_unit_expr = admiral::extract_unit(PARAM) + ) Error in inner_join(hori_data, hori_const_data, by = vars2chr(constant_by_vars)) : could not find function "inner_join" Calls: derive_param_waisthgt -> derive_param_ratio -> derive_param_computed Execution halted Flavor: r-release-windows-x86_64

Version: 0.2.0
Check: tests
Result: ERROR Running 'testthat.R' [6s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) # nolint: undesirable_function_linter > library(admiralmetabolic) # nolint: undesirable_function_linter > > test_check("admiralmetabolic") Saving _problems/test-derive_param_ratio-77.R Saving _problems/test-derive_param_ratio-127.R i Unit conversion performed for "HIPCIR". Values converted from "in" to "cm". Saving _problems/test-derive_param_waisthgt-26.R i Unit conversion performed for "HEIGHT". Values converted from "cm" to "in". Saving _problems/test-derive_param_waisthgt-123.R i Unit conversion performed for "HIPCIR". Values converted from "cm" to "in". [ FAIL 4 | WARN 0 | SKIP 0 | PASS 9 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-derive_param_ratio.R:66:5'): derive_param_computed Test 2: Cross-check with derive_param_computed(), new observations with constant denominator ── Error in `inner_join(hori_data, hori_const_data, by = vars2chr(constant_by_vars))`: could not find function "inner_join" Backtrace: ▆ 1. └─admiralmetabolic:::derive_param_ratio(...) at test-derive_param_ratio.R:66:5 2. └─admiral::derive_param_computed(...) ── Error ('test-derive_param_ratio.R:116:5'): derive_param_computed Test 3: Cross-check with derive_param_computed(), new observations with constant numerator ── Error in `inner_join(hori_data, hori_const_data, by = vars2chr(constant_by_vars))`: could not find function "inner_join" Backtrace: ▆ 1. └─admiralmetabolic:::derive_param_ratio(...) at test-derive_param_ratio.R:116:5 2. └─admiral::derive_param_computed(...) ── Error ('test-derive_param_waisthgt.R:17:5'): derive_param_waisthgt Test 1: Cross-check with admiral::derive_param_computed(), new observations with constant Height ── Error in `inner_join(hori_data, hori_const_data, by = vars2chr(constant_by_vars))`: could not find function "inner_join" Backtrace: ▆ 1. └─admiralmetabolic::derive_param_waisthgt(...) at test-derive_param_waisthgt.R:17:5 2. └─admiralmetabolic:::derive_param_ratio(...) 3. └─admiral::derive_param_computed(...) ── Error ('test-derive_param_waisthgt.R:113:5'): derive_param_waisthgt Test 3: Cross-check with and without units conversion ── Error in `inner_join(hori_data, hori_const_data, by = vars2chr(constant_by_vars))`: could not find function "inner_join" Backtrace: ▆ 1. ├─... %>% filter(PARAMCD == "WAISTHGT") at test-derive_param_waisthgt.R:113:5 2. ├─dplyr::filter(., PARAMCD == "WAISTHGT") 3. └─admiralmetabolic::derive_param_waisthgt(...) 4. └─admiralmetabolic:::derive_param_ratio(...) 5. └─admiral::derive_param_computed(...) [ FAIL 4 | WARN 0 | SKIP 0 | PASS 9 ] Error: ! Test failures. Execution halted Flavor: r-release-windows-x86_64