Last updated on 2025-09-16 03:48:53 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.6 | 55.59 | 456.93 | 512.52 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.0.7 | 39.30 | 337.96 | 377.26 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.0.7 | OK | ||||
| r-devel-linux-x86_64-fedora-gcc | 1.0.7 | 810.49 | OK | |||
| r-devel-windows-x86_64 | 1.0.6 | 54.00 | 421.00 | 475.00 | OK | |
| r-patched-linux-x86_64 | 1.0.6 | 51.10 | 413.14 | 464.24 | OK | |
| r-release-linux-x86_64 | 1.0.7 | 52.98 | 432.44 | 485.42 | OK | |
| r-release-macos-arm64 | 1.0.7 | 133.00 | OK | |||
| r-release-macos-x86_64 | 1.0.7 | 296.00 | OK | |||
| r-release-windows-x86_64 | 1.0.6 | 55.00 | 406.00 | 461.00 | ERROR | |
| r-oldrel-macos-arm64 | 1.0.7 | 141.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.0.7 | 303.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 1.0.7 | 53.00 | 532.00 | 585.00 | OK |
Version: 1.0.6
Check: examples
Result: ERROR
Running examples in ‘TransProR-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: highlight_by_node
> ### Title: Highlight Nodes in a Phylogenetic Tree with Custom Fill Colors
> ### and Transparency
> ### Aliases: highlight_by_node
>
> ### ** Examples
>
> plot_file <- system.file("extdata", "tree_plot.rds", package = "TransProR")
> p2_plot <- readRDS(plot_file)
>
> # Please replace the following vectors with your specific values
> nodes <- c(117, 129, 125, 127, 119,
+ 123, 139, 166, 124, 131, 217) # x-values of the nodes you want to highlight
> fill_colors <- c("#CD6600", "#CD6600", "#CD6600",
+ "#CD6600", "#009933", "#009933",
+ "#009933", "#009933", "#9B30FF",
+ "#9B30FF", "#9B30FF") # Fill colors
> alpha_values <- c(0.3, 0.3, 0.3, 0.3, 0.2, 0.3,
+ 0.3, 0.3, 0.3, 0.3, 0.3) # Transparency values
> extend_values <- c(25, 24, 24, 25, 25, 25,
+ 24, 24, 25, 24, 24) # Values for the 'extend' parameter
>
> p2 <- highlight_by_node(
+ p2_plot,
+ nodes,
+ fill_colors,
+ alpha_values,
+ extend_values
+ )
Error in ggtree_object + layer : non-numeric argument to binary operator
Calls: highlight_by_node
Execution halted
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
DESeq2_analyze 7.772 0.263 9.156
enrich_polar_bubble 4.351 0.119 6.110
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.0.6
Check: examples
Result: ERROR
Running examples in 'TransProR-Ex.R' failed
The error most likely occurred in:
> ### Name: highlight_by_node
> ### Title: Highlight Nodes in a Phylogenetic Tree with Custom Fill Colors
> ### and Transparency
> ### Aliases: highlight_by_node
>
> ### ** Examples
>
> plot_file <- system.file("extdata", "tree_plot.rds", package = "TransProR")
> p2_plot <- readRDS(plot_file)
>
> # Please replace the following vectors with your specific values
> nodes <- c(117, 129, 125, 127, 119,
+ 123, 139, 166, 124, 131, 217) # x-values of the nodes you want to highlight
> fill_colors <- c("#CD6600", "#CD6600", "#CD6600",
+ "#CD6600", "#009933", "#009933",
+ "#009933", "#009933", "#9B30FF",
+ "#9B30FF", "#9B30FF") # Fill colors
> alpha_values <- c(0.3, 0.3, 0.3, 0.3, 0.2, 0.3,
+ 0.3, 0.3, 0.3, 0.3, 0.3) # Transparency values
> extend_values <- c(25, 24, 24, 25, 25, 25,
+ 24, 24, 25, 24, 24) # Values for the 'extend' parameter
>
> p2 <- highlight_by_node(
+ p2_plot,
+ nodes,
+ fill_colors,
+ alpha_values,
+ extend_values
+ )
Error in ggtree_object + layer : non-numeric argument to binary operator
Calls: highlight_by_node
Execution halted
Flavor: r-release-windows-x86_64
Version: 1.0.7
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘ggtreeExtra’
Flavor: r-oldrel-macos-x86_64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.