The hardware and bandwidth for this mirror is donated by dogado GmbH, the Webhosting and Full Service-Cloud Provider. Check out our Wordpress Tutorial.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]dogado.de.
Last updated on 2026-07-03 17:53:21 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.10.3 | 3.98 | 42.13 | 46.11 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.10.3 | 2.87 | 32.05 | 34.92 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.10.3 | 7.00 | 74.74 | 81.74 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.10.3 | 103.70 | OK | |||
| r-devel-windows-x86_64 | 1.10.3 | 5.00 | 75.00 | 80.00 | OK | |
| r-patched-linux-x86_64 | 1.10.3 | 3.65 | 38.45 | 42.10 | OK | |
| r-release-linux-x86_64 | 1.10.3 | OK | ||||
| r-release-macos-arm64 | 1.10.3 | 1.00 | 22.00 | 23.00 | ERROR | |
| r-release-macos-x86_64 | 1.10.3 | 3.00 | 76.00 | 79.00 | OK | |
| r-release-windows-x86_64 | 1.10.3 | 6.00 | 76.00 | 82.00 | OK | |
| r-oldrel-macos-arm64 | 1.10.3 | 1.00 | 30.00 | 31.00 | OK | |
| r-oldrel-macos-x86_64 | 1.10.3 | 3.00 | 145.00 | 148.00 | OK | |
| r-oldrel-windows-x86_64 | 1.10.3 | 7.00 | 90.00 | 97.00 | OK |
Version: 1.10.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘get_started_with_TCGAretriever.Rmd’ using rmarkdown
Quitting from get_started_with_TCGAretriever.Rmd:120-135 [unnamed-chunk-5]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `auto_copy()`:
! `x` and `y` must share the same src.
ℹ `x` is a <data.frame> object.
ℹ `y` is `NULL`.
ℹ Set `copy = TRUE` if `y` can be copied to the same source as `x` (may be
slow).
---
Backtrace:
▆
1. └─TCGAretriever::get_clinical_data(csid = q_csid, case_list_id = q_cases)
2. ├─dplyr::left_join(...)
3. └─dplyr:::left_join.data.frame(...)
4. └─dplyr::auto_copy(x, y, copy = copy)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'get_started_with_TCGAretriever.Rmd' failed with diagnostics:
`x` and `y` must share the same src.
ℹ `x` is a <data.frame> object.
ℹ `y` is `NULL`.
ℹ Set `copy = TRUE` if `y` can be copied to the same source as `x` (may be
slow).
--- failed re-building ‘get_started_with_TCGAretriever.Rmd’
SUMMARY: processing the following file failed:
‘get_started_with_TCGAretriever.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.10.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘get_started_with_TCGAretriever.Rmd’ using rmarkdown
Error in .Call(R_curl_fetch_memory, enc2utf8(url), handle, nonblocking) :
reached elapsed time limit
Quitting from get_started_with_TCGAretriever.Rmd:47-55 [unnamed-chunk-1]
Execution halted
Flavor: r-release-macos-arm64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.