CRAN Package Check Results for Package Surrogate

Last updated on 2025-02-02 07:50:27 CET.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	3.3.1	54.82	641.49	696.31	OK
r-devel-linux-x86_64-debian-gcc	3.3.1	31.48	376.20	407.68	OK
r-devel-linux-x86_64-fedora-clang	3.3.1			1240.55	OK
r-devel-linux-x86_64-fedora-gcc	3.3.1			1133.07	OK
r-devel-windows-x86_64	3.3.1	47.00	571.00	618.00	OK
r-patched-linux-x86_64	3.3.1	53.49	593.02	646.51	OK
r-release-linux-x86_64	3.3.1	44.99	592.59	637.58	OK
r-release-macos-arm64	3.3.1			247.00	OK
r-release-macos-x86_64	3.3.1			357.00	ERROR
r-release-windows-x86_64	3.3.1	52.00	695.00	747.00	OK
r-oldrel-macos-arm64	3.3.0			138.00	OK
r-oldrel-macos-x86_64	3.3.0			278.00	OK
r-oldrel-windows-x86_64	3.3.1	68.00	800.00	868.00	OK

Additional issues

M1mac

Check Details

Version: 3.3.1
Check: tests
Result: ERROR Running ‘testthat.R’ [151s/156s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(Surrogate) > > test_check("Surrogate") Loading required namespace: cubature Loading required namespace: FNN Loading required namespace: parallel [1] "Starting parallel simulations" [1] "Finishing parallel simulations" Loading required namespace: copula Loading required namespace: fitdistrplus Loading required namespace: stringr [ FAIL 2 | WARN 0 | SKIP 8 | PASS 109 ] ══ Skipped tests (8) ═══════════════════════════════════════════════════════════ • On CRAN (8): 'test-fit_model_SurvSurv.R:37:13', 'test-fit_model_SurvSurv.R:58:13', 'test-goodness_of_fit_SurvSurv.R:19:13', 'test-goodness_of_fit_copula_models.R:8:3', 'test-goodness_of_fit_copula_models.R:55:3', 'test-goodness_of_fit_copula_models.R:102:3', 'test-sensitivity_analysis_SurvSurv.R:46:3', 'test-sensitivity_intervals.R:195:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-fit_model_ContCont_copula.R:176:3'): fit_copula_ContCont() works ── Error in `maxOptim(fn = fn, grad = grad, hess = hess, start = start, method = "BFGS", fixed = fixed, constraints = constraints, finalHessian = finalHessian, parscale = parscale, control = mControl, ...)`: NA in the initial gradient Backtrace: ▆ 1. └─Surrogate::fit_copula_ContCont(...) at test-fit_model_ContCont_copula.R:176:3 2. └─Surrogate:::fit_copula_submodel_ContCont(...) 3. ├─base::suppressWarnings(...) 4. │ └─base::withCallingHandlers(...) 5. └─maxLik::maxLik(...) 6. └─maxLik (local) maxRoutine(...) 7. └─maxLik:::maxOptim(...) ── Error ('test-fit_model_ContCont_copula.R:376:3'): GoF functions work ──────── Error in `maxOptim(fn = fn, grad = grad, hess = hess, start = start, method = "BFGS", fixed = fixed, constraints = constraints, finalHessian = finalHessian, parscale = parscale, control = mControl, ...)`: NA in the initial gradient Backtrace: ▆ 1. └─Surrogate::fit_copula_ContCont(...) at test-fit_model_ContCont_copula.R:376:3 2. └─Surrogate:::fit_copula_submodel_ContCont(...) 3. ├─base::suppressWarnings(...) 4. │ └─base::withCallingHandlers(...) 5. └─maxLik::maxLik(...) 6. └─maxLik (local) maxRoutine(...) 7. └─maxLik:::maxOptim(...) [ FAIL 2 | WARN 0 | SKIP 8 | PASS 109 ] Deleting unused snapshots: • goodness_of_fit_SurvSurv/marginal-survival-functions-gof.svg • goodness_of_fit_SurvSurv/prob-of-dying-wo-progression-gof.svg • goodness_of_fit_copula_models/association-gof-0-contcont-schizo.svg • goodness_of_fit_copula_models/association-gof-0-ordcont-schizo.svg • goodness_of_fit_copula_models/association-gof-0-ordord-schizo.svg • goodness_of_fit_copula_models/association-gof-1-contcont-schizo.svg • goodness_of_fit_copula_models/association-gof-1-ordcont-schizo.svg • goodness_of_fit_copula_models/association-gof-1-ordord-schizo.svg • goodness_of_fit_copula_models/marginal-gof-s0-contcont-schizo.svg • goodness_of_fit_copula_models/marginal-gof-s0-ordcont-schizo.svg • goodness_of_fit_copula_models/marginal-gof-s0-ordord-schizo.svg • goodness_of_fit_copula_models/marginal-gof-s1-contcont-schizo.svg • goodness_of_fit_copula_models/marginal-gof-s1-ordcont-schizo.svg • goodness_of_fit_copula_models/marginal-gof-s1-ordord-schizo.svg • goodness_of_fit_copula_models/marginal-gof-t1-contcont-schizo.svg • goodness_of_fit_copula_models/marginal-gof-t1-ordcont-schizo.svg • goodness_of_fit_copula_models/marginal-gof-t1-ordord-schizo.svg Error: Test failures Execution halted Flavor: r-release-macos-x86_64