CRAN Package Check Results for Package ProtE

Last updated on 2025-02-08 19:49:27 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.1 37.61 271.76 309.37 ERROR
r-devel-linux-x86_64-debian-gcc 1.0.1 25.11 191.35 216.46 ERROR
r-devel-linux-x86_64-fedora-clang 1.0.1 552.32 OK
r-devel-linux-x86_64-fedora-gcc 1.0.1 530.37 OK
r-devel-windows-x86_64 1.0.1 37.00 248.00 285.00 OK
r-patched-linux-x86_64 1.0.1 34.74 248.16 282.90 ERROR
r-release-linux-x86_64 1.0.1 35.93 246.29 282.22 ERROR
r-release-macos-arm64 1.0.1 10.00 ERROR
r-release-macos-x86_64 1.0.1 12.00 ERROR
r-release-windows-x86_64 1.0.1 37.00 245.00 282.00 OK
r-oldrel-macos-arm64 1.0.1 9.00 ERROR
r-oldrel-macos-x86_64 1.0.1 11.00 ERROR
r-oldrel-windows-x86_64 1.0.1 52.00 333.00 385.00 OK

Check Details

Version: 1.0.1
Check: examples
Result: ERROR Running examples in ‘ProtE-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: dianno > ### Title: DIA NN proteomics data analysis > ### Aliases: dianno > > ### ** Examples > > #Example of running the function with paths for two groups. > # The file path is a placeholder, replace it with an actual file. > > jittered.pg_matrix.tsv <- system.file("extdata", "report.pg_matrix.tsv", package = "ProtE") > dianno(file = jittered.pg_matrix.tsv, + group_names = c("Healthy","Control"), + samples_per_group = c(5,5), filtering_value = 80) The ProtE process starts now! Error in grid.newpage() : could not open file '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/ProtE/extdata/ProtE_Analysis/Plots/meanSdPlot.bmp' Calls: dianno Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.0.1
Check: examples
Result: ERROR Running examples in ‘ProtE-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: dianno > ### Title: DIA NN proteomics data analysis > ### Aliases: dianno > > ### ** Examples > > #Example of running the function with paths for two groups. > # The file path is a placeholder, replace it with an actual file. > > jittered.pg_matrix.tsv <- system.file("extdata", "report.pg_matrix.tsv", package = "ProtE") > dianno(file = jittered.pg_matrix.tsv, + group_names = c("Healthy","Control"), + samples_per_group = c(5,5), filtering_value = 80) The ProtE process starts now! Error in grid.newpage() : could not open file '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/ProtE/extdata/ProtE_Analysis/Plots/meanSdPlot.bmp' Calls: dianno Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.0.1
Check: examples
Result: ERROR Running examples in ‘ProtE-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: dianno > ### Title: DIA NN proteomics data analysis > ### Aliases: dianno > > ### ** Examples > > #Example of running the function with paths for two groups. > # The file path is a placeholder, replace it with an actual file. > > jittered.pg_matrix.tsv <- system.file("extdata", "report.pg_matrix.tsv", package = "ProtE") > dianno(file = jittered.pg_matrix.tsv, + group_names = c("Healthy","Control"), + samples_per_group = c(5,5), filtering_value = 80) The ProtE process starts now! Error in grid.newpage() : could not open file '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/ProtE/extdata/ProtE_Analysis/Plots/meanSdPlot.bmp' Calls: dianno Execution halted Flavor: r-patched-linux-x86_64

Version: 1.0.1
Check: examples
Result: ERROR Running examples in ‘ProtE-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: dianno > ### Title: DIA NN proteomics data analysis > ### Aliases: dianno > > ### ** Examples > > #Example of running the function with paths for two groups. > # The file path is a placeholder, replace it with an actual file. > > jittered.pg_matrix.tsv <- system.file("extdata", "report.pg_matrix.tsv", package = "ProtE") > dianno(file = jittered.pg_matrix.tsv, + group_names = c("Healthy","Control"), + samples_per_group = c(5,5), filtering_value = 80) The ProtE process starts now! Error in grid.newpage() : could not open file '/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/ProtE/extdata/ProtE_Analysis/Plots/meanSdPlot.bmp' Calls: dianno Execution halted Flavor: r-release-linux-x86_64

Version: 1.0.1
Check: package dependencies
Result: ERROR Package required but not available: ‘UniProt.ws’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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