CRAN Package Check Results for Package ProFAST

Last updated on 2025-12-12 23:51:07 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.6 110.92 490.28 601.20 OK
r-devel-linux-x86_64-debian-gcc 1.6 0.33 2.42 2.75 ERROR
r-devel-linux-x86_64-fedora-clang 1.6 324.00 770.22 1094.22 ERROR
r-devel-linux-x86_64-fedora-gcc 1.6 360.00 771.50 1131.50 ERROR
r-devel-windows-x86_64 1.6 158.00 436.00 594.00 OK
r-patched-linux-x86_64 1.6 113.57 464.16 577.73 OK
r-release-linux-x86_64 1.6 114.90 466.41 581.31 OK
r-release-macos-arm64 1.6 OK
r-release-macos-x86_64 1.6 82.00 151.00 233.00 OK
r-release-windows-x86_64 1.6 163.00 436.00 599.00 OK
r-oldrel-macos-arm64 1.6 NOTE
r-oldrel-macos-x86_64 1.6 92.00 176.00 268.00 NOTE
r-oldrel-windows-x86_64 1.6 147.00 589.00 736.00 OK

Check Details

Version: 1.6
Check: package dependencies
Result: ERROR Packages required but not available: 'DR.SC', 'PRECAST', 'Seurat' See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.6
Check: examples
Result: ERROR Running examples in ‘ProFAST-Ex.R’ failed The error most likely occurred in: > ### Name: NCFM > ### Title: Cell-feature coembedding for scRNA-seq data > ### Aliases: NCFM > > ### ** Examples > > data(pbmc3k_subset) > pbmc3k_subset <- NCFM(pbmc3k_subset) Error: ! The `slot` argument of `GetAssayData()` was deprecated in SeuratObject 5.0.0 and is now defunct. ℹ Please use the `layer` argument instead. Backtrace: ▆ 1. └─ProFAST::NCFM(pbmc3k_subset) 2. ├─base::as.matrix(...) 3. ├─Seurat::GetAssayData(object = object, slot = slot, assay = assay) 4. └─SeuratObject:::GetAssayData.Seurat(...) 5. └─SeuratObject::.Deprecate(...) 6. └─lifecycle::deprecate_stop(...) 7. └─lifecycle:::deprecate_stop0(msg) 8. └─rlang::cnd_signal(...) Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.6
Check: installed package size
Result: NOTE installed size is 15.8Mb sub-directories of 1Mb or more: data 2.2Mb libs 13.1Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

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