Last updated on 2026-01-19 13:49:56 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 3.6.0 | 38.30 | 209.65 | 247.95 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 3.6.0 | 26.69 | 132.84 | 159.53 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 3.6.0 | 72.00 | 349.50 | 421.50 | ERROR | |
| r-devel-windows-x86_64 | 3.6.0 | 38.00 | 189.00 | 227.00 | ERROR | |
| r-patched-linux-x86_64 | 3.6.0 | 37.23 | 190.25 | 227.48 | ERROR | |
| r-release-linux-x86_64 | 3.6.0 | 36.97 | 192.69 | 229.66 | ERROR | |
| r-release-macos-arm64 | 3.6.0 | NOTE | ||||
| r-release-macos-x86_64 | 3.6.0 | 22.00 | 209.00 | 231.00 | NOTE | |
| r-release-windows-x86_64 | 3.6.0 | 37.00 | 183.00 | 220.00 | ERROR | |
| r-oldrel-macos-arm64 | 3.6.0 | OK | ||||
| r-oldrel-macos-x86_64 | 3.6.0 | 23.00 | 198.00 | 221.00 | OK | |
| r-oldrel-windows-x86_64 | 3.6.0 | 52.00 | 235.00 | 287.00 | ERROR |
Version: 3.6.0
Check: DESCRIPTION meta-information
Result: NOTE
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘VDJ_build.R’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Version: 3.6.0
Check: examples
Result: ERROR
Running examples in ‘Platypus-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: GEX_coexpression_coefficient
> ### Title: Coexpression of selected genes
> ### Aliases: GEX_coexpression_coefficient
>
> ### ** Examples
>
> GEX_coexpression_coefficient(GEX = Platypus::small_vgm[[2]]
+ , genes = c("CD19", "CD83"), subsample.n = "none", plot.dotmap = FALSE)
Error:
! The `slot` argument of `FetchData()` was deprecated in SeuratObject
5.0.0 and is now defunct.
ℹ Please use the `layer` argument instead.
Backtrace:
▆
1. └─Platypus::GEX_coexpression_coefficient(...)
2. ├─SeuratObject::FetchData(GEX, vars = genes, slot = "counts")
3. └─SeuratObject:::FetchData.Seurat(GEX, vars = genes, slot = "counts")
4. └─SeuratObject::.Deprecate(...)
5. └─lifecycle::deprecate_stop(...)
6. └─lifecycle:::deprecate_stop0(msg)
7. └─rlang::cnd_signal(...)
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 3.6.0
Check: examples
Result: ERROR
Running examples in ‘Platypus-Ex.R’ failed
The error most likely occurred in:
> ### Name: GEX_coexpression_coefficient
> ### Title: Coexpression of selected genes
> ### Aliases: GEX_coexpression_coefficient
>
> ### ** Examples
>
> GEX_coexpression_coefficient(GEX = Platypus::small_vgm[[2]]
+ , genes = c("CD19", "CD83"), subsample.n = "none", plot.dotmap = FALSE)
Error:
! The `slot` argument of `FetchData()` was deprecated in SeuratObject
5.0.0 and is now defunct.
ℹ Please use the `layer` argument instead.
Backtrace:
▆
1. └─Platypus::GEX_coexpression_coefficient(...)
2. ├─SeuratObject::FetchData(GEX, vars = genes, slot = "counts")
3. └─SeuratObject:::FetchData.Seurat(GEX, vars = genes, slot = "counts")
4. └─SeuratObject::.Deprecate(...)
5. └─lifecycle::deprecate_stop(...)
6. └─lifecycle:::deprecate_stop0(msg)
7. └─rlang::cnd_signal(...)
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.