Last updated on 2024-07-17 19:55:50 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.27 | 39.14 | 714.05 | 753.19 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.27 | 29.70 | 507.26 | 536.96 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.27 | 1051.31 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.27 | 876.91 | NOTE | |||
| r-devel-windows-x86_64 | 0.27 | 38.00 | 543.00 | 581.00 | NOTE | |
| r-patched-linux-x86_64 | 0.27 | 41.99 | 665.71 | 707.70 | OK | |
| r-release-linux-x86_64 | 0.27 | 39.13 | 660.86 | 699.99 | OK | |
| r-release-macos-arm64 | 0.27 | 270.00 | NOTE | |||
| r-release-macos-x86_64 | 0.27 | 346.00 | WARN | |||
| r-release-windows-x86_64 | 0.27 | 38.00 | 537.00 | 575.00 | OK | |
| r-oldrel-macos-arm64 | 0.27 | 275.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 0.27 | 589.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 0.27 | 46.00 | 693.00 | 739.00 | OK |
Version: 0.27
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘BiocManager’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.27
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
NMFfit-class.Rd: getRNG
nmf.Rd: foreach, doParallel
seed.Rd: setRNG
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavor: r-devel-windows-x86_64
Version: 0.27
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘doMPI’
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 0.27
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘NMF-vignette.Rnw’ using knitr
Error in citation(x) : there is no package called 'doMPI'
Converted 9 of 10 package citations to BibTeX
Writing 11 Bibtex entries ... OK
Results written to file 'Rpackages.bib'
Error: processing vignette 'NMF-vignette.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'NMF-vignette.tex' failed.
LaTeX errors:
! Undefined control sequence.
l.215 \hlkwd{install.packages}\hldef
{(}\hlsng{'NMF'}\hldef{)}
?
! Emergency stop.
! Emergency stop.
l.215
End of file on the terminal!
! ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘NMF-vignette.Rnw’
--- re-building ‘heatmaps.Rnw’ using knitr
Converted 2 of 2 package citations to BibTeX
Writing 4 Bibtex entries ... OK
Results written to file 'Rpackages.bib'
Error: processing vignette 'heatmaps.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'heatmaps.tex' failed.
LaTeX errors:
! Undefined control sequence.
l.273 \hldef
{X} \hlkwb{<-} \hlkwd{syntheticNMF}\hldef{(}\hlnum{100}\hldef{,}...
?
! Emergency stop.
l.273
End of file on the terminal!
! ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘heatmaps.Rnw’
SUMMARY: processing the following files failed:
‘NMF-vignette.Rnw’ ‘heatmaps.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-x86_64
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