CRAN Package Check Results for Package Momocs

Last updated on 2025-10-09 20:04:13 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.4.1 24.28 237.71 261.99 ERROR
r-devel-linux-x86_64-debian-gcc 1.4.1 16.78 148.62 165.40 ERROR
r-devel-linux-x86_64-fedora-clang 1.4.1 417.75 ERROR
r-devel-linux-x86_64-fedora-gcc 1.4.1 407.57 ERROR
r-devel-windows-x86_64 1.4.1 32.00 307.00 339.00 ERROR
r-patched-linux-x86_64 1.4.1 32.33 222.84 255.17 ERROR
r-release-linux-x86_64 1.4.1 21.46 223.59 245.05 ERROR
r-release-macos-arm64 1.4.1 94.00 OK
r-release-macos-x86_64 1.4.1 189.00 OK
r-release-windows-x86_64 1.4.1 34.00 310.00 344.00 ERROR
r-oldrel-macos-arm64 1.4.1 105.00 OK
r-oldrel-macos-x86_64 1.4.1 181.00 OK
r-oldrel-windows-x86_64 1.4.1 38.00 384.00 422.00 ERROR

Check Details

Version: 1.4.1
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: LDA.Rd: lda img_plot.Rd: readJPEG ldk_contour.Rd: kde2d links_delaunay.Rd: delaunayn plot.LDA.Rd: kde2d plot.PCA.Rd: kde2d reLDA.Rd: predict.lda Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64

Version: 1.4.1
Check: examples
Result: ERROR Running examples in ‘Momocs-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: plot_CV > ### Title: Plots a cross-validation table as an heatmap > ### Aliases: plot_CV plot_CV.default plot_CV.LDA > > ### ** Examples > > h <- hearts %>% + fgProcrustes(0.01) %>% coo_slide(ldk=2) %T>% stack %>% + efourier(6, norm=FALSE) %>% LDA(~aut) iteration: 1 gain: 30322 iteration: 2 gain: 1.2498 iteration: 3 gain: 0.34194 iteration: 4 gain: 0.0062954 > > h %>% plot_CV() Warning: The `size` argument of `element_line()` is deprecated as of ggplot2 3.4.0. ℹ Please use the `linewidth` argument instead. ℹ The deprecated feature was likely used in the Momocs package. Please report the issue at <https://github.com/MomX/Momocs/issues>. Warning: The `<scale>` argument of `guides()` cannot be `FALSE`. Use "none" instead as of ggplot2 3.3.4. ℹ The deprecated feature was likely used in the Momocs package. Please report the issue at <https://github.com/MomX/Momocs/issues>. > h %>% plot_CV(freq=FALSE, rm0=FALSE, fill=FALSE) > # you can customize the returned gg with some ggplot2 functions > h %>% plot_CV(labels=FALSE, fill=TRUE, axis.size=5) + ggplot2::ggtitle("A confusion matrix") > > # or build your own using the prepared data_frame: > df <- h %>% plot_CV() %$% data Error in eval(substitute(expr), data, enclos = parent.frame()) : invalid 'envir' argument of type 'object' Calls: %$% -> <Anonymous> -> with.default -> eval Execution halted Examples with CPU (user + system) or elapsed time > 5s user system elapsed calibrate_deviations 6.448 0.059 9.652 calibrate_reconstructions 5.727 0.004 7.275 calibrate_harmonicpower 4.502 0.067 5.825 Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.4.1
Check: examples
Result: ERROR Running examples in ‘Momocs-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: plot_CV > ### Title: Plots a cross-validation table as an heatmap > ### Aliases: plot_CV plot_CV.default plot_CV.LDA > > ### ** Examples > > h <- hearts %>% + fgProcrustes(0.01) %>% coo_slide(ldk=2) %T>% stack %>% + efourier(6, norm=FALSE) %>% LDA(~aut) iteration: 1 gain: 30322 iteration: 2 gain: 1.2498 iteration: 3 gain: 0.34194 iteration: 4 gain: 0.0062954 > > h %>% plot_CV() Warning: The `size` argument of `element_line()` is deprecated as of ggplot2 3.4.0. ℹ Please use the `linewidth` argument instead. ℹ The deprecated feature was likely used in the Momocs package. Please report the issue at <https://github.com/MomX/Momocs/issues>. Warning: The `<scale>` argument of `guides()` cannot be `FALSE`. Use "none" instead as of ggplot2 3.3.4. ℹ The deprecated feature was likely used in the Momocs package. Please report the issue at <https://github.com/MomX/Momocs/issues>. > h %>% plot_CV(freq=FALSE, rm0=FALSE, fill=FALSE) > # you can customize the returned gg with some ggplot2 functions > h %>% plot_CV(labels=FALSE, fill=TRUE, axis.size=5) + ggplot2::ggtitle("A confusion matrix") > > # or build your own using the prepared data_frame: > df <- h %>% plot_CV() %$% data Error in eval(substitute(expr), data, enclos = parent.frame()) : invalid 'envir' argument of type 'object' Calls: %$% -> <Anonymous> -> with.default -> eval Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.4.1
Check: examples
Result: ERROR Running examples in ‘Momocs-Ex.R’ failed The error most likely occurred in: > ### Name: plot_CV > ### Title: Plots a cross-validation table as an heatmap > ### Aliases: plot_CV plot_CV.default plot_CV.LDA > > ### ** Examples > > h <- hearts %>% + fgProcrustes(0.01) %>% coo_slide(ldk=2) %T>% stack %>% + efourier(6, norm=FALSE) %>% LDA(~aut) iteration: 1 gain: 30322 iteration: 2 gain: 1.2498 iteration: 3 gain: 0.34194 iteration: 4 gain: 0.0062954 > > h %>% plot_CV() Warning: The `size` argument of `element_line()` is deprecated as of ggplot2 3.4.0. ℹ Please use the `linewidth` argument instead. ℹ The deprecated feature was likely used in the Momocs package. Please report the issue at <https://github.com/MomX/Momocs/issues>. Warning: The `<scale>` argument of `guides()` cannot be `FALSE`. Use "none" instead as of ggplot2 3.3.4. ℹ The deprecated feature was likely used in the Momocs package. Please report the issue at <https://github.com/MomX/Momocs/issues>. > h %>% plot_CV(freq=FALSE, rm0=FALSE, fill=FALSE) > # you can customize the returned gg with some ggplot2 functions > h %>% plot_CV(labels=FALSE, fill=TRUE, axis.size=5) + ggplot2::ggtitle("A confusion matrix") > > # or build your own using the prepared data_frame: > df <- h %>% plot_CV() %$% data Error in eval(substitute(expr), data, enclos = parent.frame()) : invalid 'envir' argument of type 'object' Calls: %$% -> <Anonymous> -> with.default -> eval Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64

Version: 1.4.1
Check: examples
Result: ERROR Running examples in ‘Momocs-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: plot_CV > ### Title: Plots a cross-validation table as an heatmap > ### Aliases: plot_CV plot_CV.default plot_CV.LDA > > ### ** Examples > > h <- hearts %>% + fgProcrustes(0.01) %>% coo_slide(ldk=2) %T>% stack %>% + efourier(6, norm=FALSE) %>% LDA(~aut) iteration: 1 gain: 30322 iteration: 2 gain: 1.2498 iteration: 3 gain: 0.34194 iteration: 4 gain: 0.0062954 > > h %>% plot_CV() Warning: The `size` argument of `element_line()` is deprecated as of ggplot2 3.4.0. ℹ Please use the `linewidth` argument instead. ℹ The deprecated feature was likely used in the Momocs package. Please report the issue at <https://github.com/MomX/Momocs/issues>. Warning: The `<scale>` argument of `guides()` cannot be `FALSE`. Use "none" instead as of ggplot2 3.3.4. ℹ The deprecated feature was likely used in the Momocs package. Please report the issue at <https://github.com/MomX/Momocs/issues>. > h %>% plot_CV(freq=FALSE, rm0=FALSE, fill=FALSE) > # you can customize the returned gg with some ggplot2 functions > h %>% plot_CV(labels=FALSE, fill=TRUE, axis.size=5) + ggplot2::ggtitle("A confusion matrix") > > # or build your own using the prepared data_frame: > df <- h %>% plot_CV() %$% data Error in eval(substitute(expr), data, enclos = parent.frame()) : invalid 'envir' argument of type 'object' Calls: %$% -> <Anonymous> -> with.default -> eval Execution halted Examples with CPU (user + system) or elapsed time > 5s user system elapsed calibrate_deviations 6.125 0.018 8.938 calibrate_reconstructions 5.572 0.015 7.488 calibrate_harmonicpower 4.301 0.031 5.029 Flavor: r-patched-linux-x86_64

Version: 1.4.1
Check: examples
Result: ERROR Running examples in ‘Momocs-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: plot_CV > ### Title: Plots a cross-validation table as an heatmap > ### Aliases: plot_CV plot_CV.default plot_CV.LDA > > ### ** Examples > > h <- hearts %>% + fgProcrustes(0.01) %>% coo_slide(ldk=2) %T>% stack %>% + efourier(6, norm=FALSE) %>% LDA(~aut) iteration: 1 gain: 30322 iteration: 2 gain: 1.2498 iteration: 3 gain: 0.34194 iteration: 4 gain: 0.0062954 > > h %>% plot_CV() Warning: The `size` argument of `element_line()` is deprecated as of ggplot2 3.4.0. ℹ Please use the `linewidth` argument instead. ℹ The deprecated feature was likely used in the Momocs package. Please report the issue at <https://github.com/MomX/Momocs/issues>. Warning: The `<scale>` argument of `guides()` cannot be `FALSE`. Use "none" instead as of ggplot2 3.3.4. ℹ The deprecated feature was likely used in the Momocs package. Please report the issue at <https://github.com/MomX/Momocs/issues>. > h %>% plot_CV(freq=FALSE, rm0=FALSE, fill=FALSE) > # you can customize the returned gg with some ggplot2 functions > h %>% plot_CV(labels=FALSE, fill=TRUE, axis.size=5) + ggplot2::ggtitle("A confusion matrix") > > # or build your own using the prepared data_frame: > df <- h %>% plot_CV() %$% data Error in eval(substitute(expr), data, enclos = parent.frame()) : invalid 'envir' argument of type 'object' Calls: %$% -> <Anonymous> -> with.default -> eval Execution halted Examples with CPU (user + system) or elapsed time > 5s user system elapsed calibrate_deviations 6.022 0.071 8.237 calibrate_reconstructions 5.887 0.001 7.177 Flavor: r-release-linux-x86_64

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