Last updated on 2025-11-19 23:50:01 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.9.1 | 7.77 | 78.72 | 86.49 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 2.9.1 | 5.48 | 58.67 | 64.15 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 2.9.1 | 22.00 | 111.94 | 133.94 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 2.9.1 | 32.00 | 116.93 | 148.93 | ERROR | |
| r-devel-windows-x86_64 | 2.9.1 | 16.00 | 99.00 | 115.00 | OK | |
| r-patched-linux-x86_64 | 2.9.1 | 8.29 | 73.35 | 81.64 | ERROR | |
| r-release-linux-x86_64 | 2.9.1 | 7.98 | 73.41 | 81.39 | ERROR | |
| r-release-macos-arm64 | 2.9.1 | OK | ||||
| r-release-macos-x86_64 | 2.9.1 | 7.00 | 135.00 | 142.00 | OK | |
| r-release-windows-x86_64 | 2.9.1 | 10.00 | 96.00 | 106.00 | OK | |
| r-oldrel-macos-arm64 | 2.9.1 | OK | ||||
| r-oldrel-macos-x86_64 | 2.9.1 | 6.00 | 110.00 | 116.00 | OK | |
| r-oldrel-windows-x86_64 | 2.9.1 | 13.00 | 121.00 | 134.00 | OK |
Version: 2.9.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [8s/11s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(tibble)
> library(MolgenisArmadillo)
> library(webmockr)
>
> test_check("MolgenisArmadillo")
crul not installed, skipping enable
HttrAdapter enabled!
Httr2Adapter enabled!
Saving _problems/test-object-46.R
Saving _problems/test-object-86.R
Attempting to install package [ 'C:/test/test.tar.gz' ]
Attempting to install package [ 'C:/test/test.tar.gz' ]
Package [ 'C:/test/test.tar.gz' ] installed
Deleted 'project/folder2'
Attaching package: 'dplyr'
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
Renaming .csv column name `folder` to `source_folder`: please update your .csv file to silence this message.
Renaming .csv column name `table` to `source_table`: please update your .csv file to silence this message.
'target_folder' not specified in .csv file: defaulting to source folder name
'target_table' not specified in .csv file: defaulting to source table name
'target_folder' not specified in .csv file: defaulting to source folder name
'target_table' not specified in .csv file: defaulting to source table name
Argument `new project` has now been deprecated: please use `target_project` instead
x View 'target_folder/target_table' failed with status '409': 'Project 'link-test222' already has an object 'core-variables/nonrep.alf'
v View 'target_folder/target_table' successfully created
Renaming .csv column name `folder` to `source_folder`: please update your .csv file to silence this message.
Renaming .csv column name `table` to `source_table`: please update your .csv file to silence this message.
'target_folder' not specified in .csv file: defaulting to source folder name
'target_table' not specified in .csv file: defaulting to source table name
[1] "project/folder1/obj1" "project/folder1/obj2" "project/folder2/obj3"
[4] "project/folder2/obj4"
[1] "project/folder1/obj1" "project/folder1/obj2" "project/folder2/obj3"
[4] "project/folder2/obj4"
Saving _problems/test-utils-17.R
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 237 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-object.R:30:3'): .upload_object handles errors ─────────────────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
i Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. ├─testthat::expect_error(...) at test-object.R:30:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─testthat::with_mock(...)
8. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
9. └─lifecycle:::deprecate_stop0(msg)
10. └─rlang::cnd_signal(...)
── Error ('test-object.R:70:3'): .upload_object uploads object ─────────────────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
i Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. ├─testthat::expect_message(...) at test-object.R:70:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─testthat::with_mock(...)
8. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
9. └─lifecycle:::deprecate_stop0(msg)
10. └─rlang::cnd_signal(...)
── Error ('test-object.R:310:3'): .load_object loads the object from file ──────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
i Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-object.R:310:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. └─testthat::with_mock(...)
10. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
11. └─lifecycle:::deprecate_stop0(msg)
12. └─rlang::cnd_signal(...)
── Error ('test-utils.R:11:3'): .handle_request_error handles 500 ──────────────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
i Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. └─testthat::with_mock(...) at test-utils.R:11:3
2. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
3. └─lifecycle:::deprecate_stop0(msg)
4. └─rlang::cnd_signal(...)
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 237 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 2.9.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [6s/8s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(tibble)
> library(MolgenisArmadillo)
> library(webmockr)
>
> test_check("MolgenisArmadillo")
crul not installed, skipping enable
HttrAdapter enabled!
Httr2Adapter enabled!
Saving _problems/test-object-46.R
Saving _problems/test-object-86.R
Attempting to install package [ 'C:/test/test.tar.gz' ]
Attempting to install package [ 'C:/test/test.tar.gz' ]
Package [ 'C:/test/test.tar.gz' ] installed
Deleted 'project/folder2'
Attaching package: 'dplyr'
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
Renaming .csv column name `folder` to `source_folder`: please update your .csv file to silence this message.
Renaming .csv column name `table` to `source_table`: please update your .csv file to silence this message.
'target_folder' not specified in .csv file: defaulting to source folder name
'target_table' not specified in .csv file: defaulting to source table name
'target_folder' not specified in .csv file: defaulting to source folder name
'target_table' not specified in .csv file: defaulting to source table name
Argument `new project` has now been deprecated: please use `target_project` instead
x View 'target_folder/target_table' failed with status '409': 'Project 'link-test222' already has an object 'core-variables/nonrep.alf'
v View 'target_folder/target_table' successfully created
Renaming .csv column name `folder` to `source_folder`: please update your .csv file to silence this message.
Renaming .csv column name `table` to `source_table`: please update your .csv file to silence this message.
'target_folder' not specified in .csv file: defaulting to source folder name
'target_table' not specified in .csv file: defaulting to source table name
[1] "project/folder1/obj1" "project/folder1/obj2" "project/folder2/obj3"
[4] "project/folder2/obj4"
[1] "project/folder1/obj1" "project/folder1/obj2" "project/folder2/obj3"
[4] "project/folder2/obj4"
Saving _problems/test-utils-17.R
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 237 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-object.R:30:3'): .upload_object handles errors ─────────────────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
i Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. ├─testthat::expect_error(...) at test-object.R:30:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─testthat::with_mock(...)
8. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
9. └─lifecycle:::deprecate_stop0(msg)
10. └─rlang::cnd_signal(...)
── Error ('test-object.R:70:3'): .upload_object uploads object ─────────────────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
i Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. ├─testthat::expect_message(...) at test-object.R:70:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─testthat::with_mock(...)
8. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
9. └─lifecycle:::deprecate_stop0(msg)
10. └─rlang::cnd_signal(...)
── Error ('test-object.R:310:3'): .load_object loads the object from file ──────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
i Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-object.R:310:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. └─testthat::with_mock(...)
10. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
11. └─lifecycle:::deprecate_stop0(msg)
12. └─rlang::cnd_signal(...)
── Error ('test-utils.R:11:3'): .handle_request_error handles 500 ──────────────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
i Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. └─testthat::with_mock(...) at test-utils.R:11:3
2. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
3. └─lifecycle:::deprecate_stop0(msg)
4. └─rlang::cnd_signal(...)
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 237 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 2.9.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [14s/20s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(tibble)
> library(MolgenisArmadillo)
> library(webmockr)
>
> test_check("MolgenisArmadillo")
crul not installed, skipping enable
HttrAdapter enabled!
Httr2Adapter enabled!
Saving _problems/test-object-46.R
Saving _problems/test-object-86.R
Attempting to install package [ 'C:/test/test.tar.gz' ]
Attempting to install package [ 'C:/test/test.tar.gz' ]
Package [ 'C:/test/test.tar.gz' ] installed
Deleted 'project/folder2'
Attaching package: 'dplyr'
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
Renaming .csv column name `folder` to `source_folder`: please update your .csv file to silence this message.
Renaming .csv column name `table` to `source_table`: please update your .csv file to silence this message.
'target_folder' not specified in .csv file: defaulting to source folder name
'target_table' not specified in .csv file: defaulting to source table name
'target_folder' not specified in .csv file: defaulting to source folder name
'target_table' not specified in .csv file: defaulting to source table name
Argument `new project` has now been deprecated: please use `target_project` instead
x View 'target_folder/target_table' failed with status '409': 'Project 'link-test222' already has an object 'core-variables/nonrep.alf'
v View 'target_folder/target_table' successfully created
Renaming .csv column name `folder` to `source_folder`: please update your .csv file to silence this message.
Renaming .csv column name `table` to `source_table`: please update your .csv file to silence this message.
'target_folder' not specified in .csv file: defaulting to source folder name
'target_table' not specified in .csv file: defaulting to source table name
[1] "project/folder1/obj1" "project/folder1/obj2" "project/folder2/obj3"
[4] "project/folder2/obj4"
[1] "project/folder1/obj1" "project/folder1/obj2" "project/folder2/obj3"
[4] "project/folder2/obj4"
Saving _problems/test-utils-17.R
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 237 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-object.R:30:3'): .upload_object handles errors ─────────────────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
i Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. ├─testthat::expect_error(...) at test-object.R:30:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─testthat::with_mock(...)
8. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
9. └─lifecycle:::deprecate_stop0(msg)
10. └─rlang::cnd_signal(...)
── Error ('test-object.R:70:3'): .upload_object uploads object ─────────────────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
i Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. ├─testthat::expect_message(...) at test-object.R:70:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─testthat::with_mock(...)
8. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
9. └─lifecycle:::deprecate_stop0(msg)
10. └─rlang::cnd_signal(...)
── Error ('test-object.R:310:3'): .load_object loads the object from file ──────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
i Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-object.R:310:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. └─testthat::with_mock(...)
10. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
11. └─lifecycle:::deprecate_stop0(msg)
12. └─rlang::cnd_signal(...)
── Error ('test-utils.R:11:3'): .handle_request_error handles 500 ──────────────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
i Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. └─testthat::with_mock(...) at test-utils.R:11:3
2. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
3. └─lifecycle:::deprecate_stop0(msg)
4. └─rlang::cnd_signal(...)
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 237 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 2.9.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [14s/43s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(tibble)
> library(MolgenisArmadillo)
> library(webmockr)
>
> test_check("MolgenisArmadillo")
CrulAdapter enabled!
HttrAdapter enabled!
Httr2Adapter enabled!
Saving _problems/test-object-46.R
Saving _problems/test-object-86.R
Attempting to install package [ 'C:/test/test.tar.gz' ]
Attempting to install package [ 'C:/test/test.tar.gz' ]
Package [ 'C:/test/test.tar.gz' ] installed
Deleted 'project/folder2'
Attaching package: 'dplyr'
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
Renaming .csv column name `folder` to `source_folder`: please update your .csv file to silence this message.
Renaming .csv column name `table` to `source_table`: please update your .csv file to silence this message.
'target_folder' not specified in .csv file: defaulting to source folder name
'target_table' not specified in .csv file: defaulting to source table name
'target_folder' not specified in .csv file: defaulting to source folder name
'target_table' not specified in .csv file: defaulting to source table name
Argument `new project` has now been deprecated: please use `target_project` instead
x View 'target_folder/target_table' failed with status '409': 'Project 'link-test222' already has an object 'core-variables/nonrep.alf'
v View 'target_folder/target_table' successfully created
Renaming .csv column name `folder` to `source_folder`: please update your .csv file to silence this message.
Renaming .csv column name `table` to `source_table`: please update your .csv file to silence this message.
'target_folder' not specified in .csv file: defaulting to source folder name
'target_table' not specified in .csv file: defaulting to source table name
[1] "project/folder1/obj1" "project/folder1/obj2" "project/folder2/obj3"
[4] "project/folder2/obj4"
[1] "project/folder1/obj1" "project/folder1/obj2" "project/folder2/obj3"
[4] "project/folder2/obj4"
Saving _problems/test-utils-17.R
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 237 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-object.R:30:3'): .upload_object handles errors ─────────────────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
i Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. ├─testthat::expect_error(...) at test-object.R:30:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─testthat::with_mock(...)
8. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
9. └─lifecycle:::deprecate_stop0(msg)
10. └─rlang::cnd_signal(...)
── Error ('test-object.R:70:3'): .upload_object uploads object ─────────────────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
i Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. ├─testthat::expect_message(...) at test-object.R:70:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─testthat::with_mock(...)
8. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
9. └─lifecycle:::deprecate_stop0(msg)
10. └─rlang::cnd_signal(...)
── Error ('test-object.R:310:3'): .load_object loads the object from file ──────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
i Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-object.R:310:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. └─testthat::with_mock(...)
10. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
11. └─lifecycle:::deprecate_stop0(msg)
12. └─rlang::cnd_signal(...)
── Error ('test-utils.R:11:3'): .handle_request_error handles 500 ──────────────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
i Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. └─testthat::with_mock(...) at test-utils.R:11:3
2. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
3. └─lifecycle:::deprecate_stop0(msg)
4. └─rlang::cnd_signal(...)
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 237 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 2.9.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [8s/10s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(tibble)
> library(MolgenisArmadillo)
> library(webmockr)
>
> test_check("MolgenisArmadillo")
crul not installed, skipping enable
HttrAdapter enabled!
Httr2Adapter enabled!
Saving _problems/test-object-46.R
Saving _problems/test-object-86.R
Attempting to install package [ 'C:/test/test.tar.gz' ]
Attempting to install package [ 'C:/test/test.tar.gz' ]
Package [ 'C:/test/test.tar.gz' ] installed
Deleted 'project/folder2'
Attaching package: 'dplyr'
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
Renaming .csv column name `folder` to `source_folder`: please update your .csv file to silence this message.
Renaming .csv column name `table` to `source_table`: please update your .csv file to silence this message.
'target_folder' not specified in .csv file: defaulting to source folder name
'target_table' not specified in .csv file: defaulting to source table name
'target_folder' not specified in .csv file: defaulting to source folder name
'target_table' not specified in .csv file: defaulting to source table name
Argument `new project` has now been deprecated: please use `target_project` instead
x View 'target_folder/target_table' failed with status '409': 'Project 'link-test222' already has an object 'core-variables/nonrep.alf'
v View 'target_folder/target_table' successfully created
Renaming .csv column name `folder` to `source_folder`: please update your .csv file to silence this message.
Renaming .csv column name `table` to `source_table`: please update your .csv file to silence this message.
'target_folder' not specified in .csv file: defaulting to source folder name
'target_table' not specified in .csv file: defaulting to source table name
[1] "project/folder1/obj1" "project/folder1/obj2" "project/folder2/obj3"
[4] "project/folder2/obj4"
[1] "project/folder1/obj1" "project/folder1/obj2" "project/folder2/obj3"
[4] "project/folder2/obj4"
Saving _problems/test-utils-17.R
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 237 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-object.R:30:3'): .upload_object handles errors ─────────────────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
i Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. ├─testthat::expect_error(...) at test-object.R:30:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─testthat::with_mock(...)
8. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
9. └─lifecycle:::deprecate_stop0(msg)
10. └─rlang::cnd_signal(...)
── Error ('test-object.R:70:3'): .upload_object uploads object ─────────────────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
i Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. ├─testthat::expect_message(...) at test-object.R:70:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─testthat::with_mock(...)
8. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
9. └─lifecycle:::deprecate_stop0(msg)
10. └─rlang::cnd_signal(...)
── Error ('test-object.R:310:3'): .load_object loads the object from file ──────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
i Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. ├─testthat::expect_silent(...) at test-object.R:310:3
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. └─testthat::with_mock(...)
10. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
11. └─lifecycle:::deprecate_stop0(msg)
12. └─rlang::cnd_signal(...)
── Error ('test-utils.R:11:3'): .handle_request_error handles 500 ──────────────
<lifecycle_error_deprecated/defunctError/rlang_error/error/condition>
Error: `with_mock()` was deprecated in testthat 3.2.0 and is now defunct.
i Please use `with_mocked_bindings()` instead.
Backtrace:
▆
1. └─testthat::with_mock(...) at test-utils.R:11:3
2. └─lifecycle::deprecate_stop("3.2.0", "with_mock()", "with_mocked_bindings()")
3. └─lifecycle:::deprecate_stop0(msg)
4. └─rlang::cnd_signal(...)
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 237 ]
Error:
! Test failures.
Execution halted
Flavors: r-patched-linux-x86_64, r-release-linux-x86_64
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