Last updated on 2024-05-02 08:01:48 CEST.
Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
---|---|---|---|---|---|---|
r-devel-linux-x86_64-debian-clang | 1.1.0 | 21.90 | 313.06 | 334.96 | NOTE | |
r-devel-linux-x86_64-debian-gcc | 1.1.0 | 19.16 | 236.12 | 255.28 | NOTE | |
r-devel-linux-x86_64-fedora-clang | 1.1.0 | 439.32 | NOTE | |||
r-devel-linux-x86_64-fedora-gcc | 1.1.0 | 464.04 | NOTE | |||
r-devel-windows-x86_64 | 1.1.0 | 24.00 | 421.00 | 445.00 | NOTE | |
r-patched-linux-x86_64 | 1.1.0 | 15.87 | 290.86 | 306.73 | NOTE | |
r-release-linux-x86_64 | 1.1.0 | 22.20 | 295.54 | 317.74 | NOTE | |
r-release-macos-arm64 | 1.1.0 | 6.00 | ERROR | |||
r-release-macos-x86_64 | 1.1.0 | 354.00 | ERROR | |||
r-release-windows-x86_64 | 1.1.0 | 25.00 | 420.00 | 445.00 | NOTE | |
r-oldrel-macos-arm64 | 1.1.0 | 131.00 | ERROR | |||
r-oldrel-macos-x86_64 | 1.1.0 | 308.00 | ERROR | |||
r-oldrel-windows-x86_64 | 1.1.0 | 29.00 | 585.00 | 614.00 | NOTE |
Version: 1.1.0
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘ArchR’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 1.1.0
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘ArchR’
Imports includes 31 non-default packages.
Importing from so many packages makes the package vulnerable to any of
them becoming unavailable. Move as many as possible to Suggests and
use conditionally.
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.1.0
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'ArchR', 'TxDb.Hsapiens.UCSC.hg38.refGene'
Flavors: r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64
Version: 1.1.0
Check: package dependencies
Result: ERROR
Package required but not available: ‘ggbio’
Packages suggested but not available for checking:
'ArchR', 'TxDb.Hsapiens.UCSC.hg38.refGene',
'TxDb.Hsapiens.UCSC.hg19.knownGene', 'BSgenome.Hsapiens.UCSC.hg19'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-release-macos-arm64
Version: 1.1.0
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'ArchR', 'TxDb.Hsapiens.UCSC.hg38.refGene',
'TxDb.Hsapiens.UCSC.hg19.knownGene', 'BSgenome.Hsapiens.UCSC.hg19'
Flavor: r-release-macos-x86_64
Version: 1.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/172s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
── Error ('test_exportOpenTiles.R:13:3'): exportDifferentials works on a 3 sample test dataset ──
Error in `.stopOnAvailablePkg(genome)`: BSgenome.Hsapiens.UCSC.hg19 package is not currently installed.
You first need to install it, which you can do with:
library(BiocManager)
install("BSgenome.Hsapiens.UCSC.hg19")
Backtrace:
▆
1. └─MOCHA::exportOpenTiles(...) at test_exportOpenTiles.R:13:3
2. └─BSgenome::getBSgenome(S4Vectors::metadata(SampleTileObject)$Genome)
3. └─BSgenome:::.getInstalledPkgnameFromGenome(genome, masked = masked)
4. └─BSgenome:::.stopOnAvailablePkg(genome)
[ FAIL 2 | WARN 13 | SKIP 23 | PASS 21 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.0
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'ArchR', 'motifmatchr', 'TxDb.Hsapiens.UCSC.hg38.refGene',
'BSgenome.Hsapiens.UCSC.hg19', 'chromVAR'
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 1.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [44s/54s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
── Error ('test_exportOpenTiles.R:13:3'): exportDifferentials works on a 3 sample test dataset ──
Error in `.stopOnAvailablePkg(genome)`: BSgenome.Hsapiens.UCSC.hg19 package is not currently installed.
You first need to install it, which you can do with:
library(BiocManager)
install("BSgenome.Hsapiens.UCSC.hg19")
Backtrace:
▆
1. └─MOCHA::exportOpenTiles(...) at test_exportOpenTiles.R:13:3
2. └─BSgenome::getBSgenome(S4Vectors::metadata(SampleTileObject)$Genome)
3. └─BSgenome:::.getInstalledPkgnameFromGenome(genome, masked = masked)
4. └─BSgenome:::.stopOnAvailablePkg(genome)
[ FAIL 2 | WARN 14 | SKIP 23 | PASS 21 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-arm64
Version: 1.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [73s/154s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
── Error ('test_exportOpenTiles.R:13:3'): exportDifferentials works on a 3 sample test dataset ──
Error in `.stopOnAvailablePkg(genome)`: BSgenome.Hsapiens.UCSC.hg19 package is not currently installed.
You first need to install it, which you can do with:
library(BiocManager)
install("BSgenome.Hsapiens.UCSC.hg19")
Backtrace:
▆
1. └─MOCHA::exportOpenTiles(...) at test_exportOpenTiles.R:13:3
2. └─BSgenome::getBSgenome(S4Vectors::metadata(SampleTileObject)$Genome)
3. └─BSgenome:::.getInstalledPkgnameFromGenome(genome, masked = masked)
4. └─BSgenome:::.stopOnAvailablePkg(genome)
[ FAIL 2 | WARN 14 | SKIP 23 | PASS 21 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.