CRAN Package Check Results for Package IncidencePrevalence

Last updated on 2025-04-02 23:00:54 CEST.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	1.2.0	7.90	938.85	946.75	OK
r-devel-linux-x86_64-debian-gcc	1.2.0	4.41	662.38	666.79	OK
r-devel-linux-x86_64-fedora-clang	1.2.0			1269.59	OK
r-devel-linux-x86_64-fedora-gcc	1.2.0			1448.18	OK
r-devel-macos-arm64	1.2.0			206.00	OK
r-devel-macos-x86_64	1.2.0			439.00	OK
r-devel-windows-x86_64	1.2.0	8.00	654.00	662.00	OK
r-patched-linux-x86_64	1.2.0	7.98	907.63	915.61	OK
r-release-linux-x86_64	1.2.0	6.91	880.38	887.29	OK
r-release-macos-arm64	1.2.0			274.00	OK
r-release-macos-x86_64	1.2.0			487.00	OK
r-release-windows-x86_64	1.2.0	8.00	640.00	648.00	OK
r-oldrel-macos-arm64	1.2.0			264.00	ERROR
r-oldrel-macos-x86_64	1.2.0			502.00	OK
r-oldrel-windows-x86_64	1.2.0	11.00	896.00	907.00	OK

Check Details

Version: 1.2.0
Check: tests
Result: ERROR Running ‘testthat.R’ [105s/72s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(IncidencePrevalence) > > test_check("IncidencePrevalence") Starting 2 test processes [ FAIL 1 | WARN 0 | SKIP 97 | PASS 59 ] ══ Skipped tests (97) ══════════════════════════════════════════════════════════ • On CRAN (97): 'test-dateUtilities.R:2:3', 'test-benchmarkIncidencePrevalence.R:2:3', 'test-benchmarkIncidencePrevalence.R:45:3', 'test-estimatePrevalence.R:40:3', 'test-estimatePrevalence.R:92:3', 'test-estimatePrevalence.R:149:3', 'test-estimatePrevalence.R:268:3', 'test-estimatePrevalence.R:412:3', 'test-estimatePrevalence.R:494:3', 'test-estimatePrevalence.R:645:3', 'test-estimatePrevalence.R:696:3', 'test-estimatePrevalence.R:741:3', 'test-estimatePrevalence.R:796:3', 'test-estimatePrevalence.R:844:3', 'test-estimatePrevalence.R:868:3', 'test-estimatePrevalence.R:893:3', 'test-estimatePrevalence.R:1034:3', 'test-estimatePrevalence.R:1081:3', 'test-estimatePrevalence.R:1114:3', 'test-estimatePrevalence.R:1193:3', 'test-estimatePrevalence.R:1245:3', 'test-estimatePrevalence.R:1415:3', 'test-estimatePrevalence.R:1457:3', 'test-estimatePrevalence.R:1503:3', 'test-estimateIncidence.R:57:3', 'test-estimateIncidence.R:120:3', 'test-estimateIncidence.R:230:3', 'test-estimateIncidence.R:300:3', 'test-estimateIncidence.R:399:3', 'test-estimateIncidence.R:503:3', 'test-estimateIncidence.R:598:3', 'test-estimateIncidence.R:762:3', 'test-estimateIncidence.R:869:3', 'test-estimateIncidence.R:1063:3', 'test-estimateIncidence.R:1127:3', 'test-estimateIncidence.R:1184:3', 'test-estimateIncidence.R:1269:3', 'test-estimateIncidence.R:1413:3', 'test-estimateIncidence.R:1529:3', 'test-estimateIncidence.R:1608:3', 'test-estimateIncidence.R:1716:3', 'test-estimateIncidence.R:1820:3', 'test-estimateIncidence.R:1979:3', 'test-estimateIncidence.R:2035:3', 'test-estimateIncidence.R:2233:3', 'test-estimateIncidence.R:2432:3', 'test-estimateIncidence.R:2517:3', 'test-estimateIncidence.R:2943:3', 'test-estimateIncidence.R:2991:3', 'test-estimateIncidence.R:3046:3', 'test-estimateIncidence.R:3104:3', 'test-estimateIncidence.R:3127:3', 'test-estimateIncidence.R:3142:3', 'test-estimateIncidence.R:3182:3', 'test-estimateIncidence.R:3344:3', 'test-estimateIncidence.R:3423:3', 'test-estimateIncidence.R:3467:3', 'test-estimateIncidence.R:3513:3', 'test-estimateIncidence.R:3561:3', 'test-mockIncidencePrevalence.R:2:3', 'test-mockIncidencePrevalence.R:39:3', 'test-mockIncidencePrevalence.R:69:3', 'test-mockIncidencePrevalence.R:171:3', 'test-plotting.R:2:3', 'test-plotting.R:216:3', 'test-plotting.R:265:3', 'test-plotting.R:315:3', 'test-plotting.R:379:3', 'test-tables.R:2:3', 'test-tables.R:126:3', 'test-tidyResults.R:2:3', 'test-tidyResults.R:57:3', 'test-generateDenominatorCohortSet.R:138:3', 'test-generateDenominatorCohortSet.R:185:3', 'test-generateDenominatorCohortSet.R:289:3', 'test-generateDenominatorCohortSet.R:326:3', 'test-generateDenominatorCohortSet.R:591:3', 'test-generateDenominatorCohortSet.R:641:3', 'test-generateDenominatorCohortSet.R:720:3', 'test-generateDenominatorCohortSet.R:812:3', 'test-generateDenominatorCohortSet.R:855:3', 'test-generateDenominatorCohortSet.R:907:3', 'test-generateDenominatorCohortSet.R:991:3', 'test-generateDenominatorCohortSet.R:1118:3', 'test-generateDenominatorCohortSet.R:1199:3', 'test-generateDenominatorCohortSet.R:1263:3', 'test-generateDenominatorCohortSet.R:1316:3', 'test-generateDenominatorCohortSet.R:1374:3', 'test-generateDenominatorCohortSet.R:1449:3', 'test-generateDenominatorCohortSet.R:1572:3', 'test-generateDenominatorCohortSet.R:1673:3', 'test-generateDenominatorCohortSet.R:1726:3', 'test-generateDenominatorCohortSet.R:1789:3', 'test-generateDenominatorCohortSet.R:2018:3', 'test-generateDenominatorCohortSet.R:2109:3', 'test-generateDenominatorCohortSet.R:2309:3', 'test-generateDenominatorCohortSet.R:2413:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-estimateIncidence.R:1049:3'): mock db: multiple denominator inputs ── <rlib_error_package_not_found/rlang_error/error/condition> Error in `tableIncidence(inc_1, type = "tibble")`: The package "visOmopResults" (>= 1.0.2) is required. Backtrace: ▆ 1. ├─testthat::expect_identical(...) at test-estimateIncidence.R:1049:3 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object") 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─IncidencePrevalence::tableIncidence(inc_1, type = "tibble") 5. └─rlang::check_installed("visOmopResults", version = "1.0.2") [ FAIL 1 | WARN 0 | SKIP 97 | PASS 59 ] Error: Test failures Execution halted Flavor: r-oldrel-macos-arm64

Version: 1.2.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘a01_Introduction_to_IncidencePrevalence.Rmd’ using rmarkdown Quitting from a01_Introduction_to_IncidencePrevalence.Rmd:102-107 [unnamed-chunk-10] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NULL ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'a01_Introduction_to_IncidencePrevalence.Rmd' failed with diagnostics: The package "visOmopResults" (>= 1.0.2) is required. --- failed re-building ‘a01_Introduction_to_IncidencePrevalence.Rmd’ --- re-building ‘a02_Creating_denominator_populations.Rmd’ using rmarkdown --- finished re-building ‘a02_Creating_denominator_populations.Rmd’ --- re-building ‘a03_Creating_target_denominator_populations.Rmd’ using rmarkdown --- finished re-building ‘a03_Creating_target_denominator_populations.Rmd’ --- re-building ‘a04_Calculating_prevalence.Rmd’ using rmarkdown Quitting from a04_Calculating_prevalence.Rmd:75-87 [unnamed-chunk-6] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NULL ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'a04_Calculating_prevalence.Rmd' failed with diagnostics: The package "visOmopResults" (>= 1.0.2) is required. --- failed re-building ‘a04_Calculating_prevalence.Rmd’ --- re-building ‘a05_Calculating_incidence.Rmd’ using rmarkdown Quitting from a05_Calculating_incidence.Rmd:104-118 [unnamed-chunk-8] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NULL ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'a05_Calculating_incidence.Rmd' failed with diagnostics: The package "visOmopResults" (>= 1.0.2) is required. --- failed re-building ‘a05_Calculating_incidence.Rmd’ --- re-building ‘a06_Working_with_IncidencePrevalence_Results.Rmd’ using rmarkdown --- finished re-building ‘a06_Working_with_IncidencePrevalence_Results.Rmd’ --- re-building ‘a07_benchmark.Rmd’ using rmarkdown --- finished re-building ‘a07_benchmark.Rmd’ SUMMARY: processing the following files failed: ‘a01_Introduction_to_IncidencePrevalence.Rmd’ ‘a04_Calculating_prevalence.Rmd’ ‘a05_Calculating_incidence.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-oldrel-macos-arm64