CRAN Package Check Results for Package GENEAcore

Last updated on 2025-04-07 16:51:58 CEST.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	1.0.0	4.19	243.83	248.02	ERROR
r-devel-linux-x86_64-debian-gcc	1.0.0	2.93	177.82	180.75	ERROR
r-devel-linux-x86_64-fedora-clang	1.0.0			431.47	OK
r-devel-linux-x86_64-fedora-gcc	1.0.0			441.87	OK
r-devel-macos-arm64	1.0.0			144.00	OK
r-devel-macos-x86_64	1.0.0			374.00	OK
r-devel-windows-x86_64	1.0.0	10.00	317.00	327.00	OK
r-patched-linux-x86_64	1.0.0	4.61	241.11	245.72	ERROR
r-release-linux-x86_64	1.0.0	3.67	213.62	217.29	ERROR
r-release-macos-arm64	1.0.0			128.00	NOTE
r-release-macos-x86_64	1.0.0			351.00	NOTE
r-release-windows-x86_64	1.0.0	11.00	298.00	309.00	NOTE
r-oldrel-macos-arm64	1.0.0			144.00	NOTE
r-oldrel-macos-x86_64	1.0.0			316.00	NOTE
r-oldrel-windows-x86_64	1.0.0	12.00	324.00	336.00	NOTE

Check Details

Version: 1.0.0
Check: tests
Result: ERROR Running ‘testthat.R’ [212s/281s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(GENEAcore) > > test_check("GENEAcore") Processing file 1/1 : 10Hz_calibration_file.bin [1] "File read time: 0.08 seconds" [1] "MPI creation time: 0.01 seconds" [1] "Non-movement detection time: 0.63 seconds" [1] "Auto-calibration calculation time: 0.8 seconds" [1] "Transitions detection time: 3.28 seconds" Processing Day 1 of 2 Start_index: 0 End_index: 287990 [1] "Reading 287990 rows of raw data time: 1.72 seconds" [1] "Apply calibration time: 0.11 seconds" [1] "Apply calculations time: 1.39 seconds" [1] "Epoch creation time: 11.52 seconds" [1] "Epoch steps calculation time: 64.45 seconds" [1] "Event creation time: 0.65 seconds" [1] "Event steps calculation time: 4.54 seconds" Processing Day 2 of 2 Start_index: 287990 End_index: 503990 [1] "Reading 216000 rows of raw data time: 1.24 seconds" [1] "Apply calibration time: 0.06 seconds" [1] "Apply calculations time: 0.78 seconds" [1] "Epoch creation time: 8.68 seconds" [1] "Epoch steps calculation time: 101.17 seconds" [1] "Event creation time: 0.5 seconds" [1] "Event steps calculation time: 3.31 seconds" [1] "Total epoch/event creation time: 201.78 seconds" [ FAIL 4 | WARN 4 | SKIP 0 | PASS 30 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-MPI_calibrate.R:136:3'): (code run outside of `test_that()`) ─── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. └─base::eval(...) 2. └─base::eval(...) 3. └─GENEAcore::create_MPI(binfile, binfile_path, output_folder) at test-MPI_calibrate.R:136:3 4. └─base::saveRDS(...) 5. └─base::gzfile(file, mode) ── Error ('test-MPI_create.R:23:3'): (code run outside of `test_that()`) ─────── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. └─base::eval(...) 2. └─base::eval(...) 3. └─GENEAcore::create_MPI(binfile_10Hz, binfile_name, output_folder) at test-MPI_create.R:23:3 4. └─base::saveRDS(...) 5. └─base::gzfile(file, mode) ── Error ('test-sample_binfile.R:26:3'): (code run outside of `test_that()`) ─── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. └─base::eval(...) 2. └─base::eval(...) 3. └─GENEAcore::sample_binfile(binfile, binfile_path, output_folder) at test-sample_binfile.R:26:3 4. └─GENEAcore::create_MPI(binfile, binfile_path, output_folder) 5. └─base::saveRDS(...) 6. └─base::gzfile(file, mode) ── Error ('test-step_counter.R:14:3'): (code run outside of `test_that()`) ───── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. └─base::eval(...) 2. └─base::eval(...) 3. └─GENEAcore::create_MPI(binfile_50, binfile_path_50, output_folder) at test-step_counter.R:14:3 4. └─base::saveRDS(...) 5. └─base::gzfile(file, mode) [ FAIL 4 | WARN 4 | SKIP 0 | PASS 30 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.0.0
Check: tests
Result: ERROR Running ‘testthat.R’ [153s/180s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(GENEAcore) > > test_check("GENEAcore") Processing file 1/1 : 10Hz_calibration_file.bin [1] "File read time: 0.07 seconds" [1] "MPI creation time: 0.01 seconds" [1] "Non-movement detection time: 0.44 seconds" [1] "Auto-calibration calculation time: 0.64 seconds" [1] "Transitions detection time: 2.36 seconds" Processing Day 1 of 2 Start_index: 0 End_index: 287990 [1] "Reading 287990 rows of raw data time: 1.19 seconds" [1] "Apply calibration time: 0.07 seconds" [1] "Apply calculations time: 0.95 seconds" [1] "Epoch creation time: 6.43 seconds" [1] "Epoch steps calculation time: 40.42 seconds" [1] "Event creation time: 0.45 seconds" [1] "Event steps calculation time: 2.85 seconds" Processing Day 2 of 2 Start_index: 287990 End_index: 503990 [1] "Reading 216000 rows of raw data time: 0.85 seconds" [1] "Apply calibration time: 0.04 seconds" [1] "Apply calculations time: 0.51 seconds" [1] "Epoch creation time: 4.18 seconds" [1] "Epoch steps calculation time: 83.67 seconds" [1] "Event creation time: 0.34 seconds" [1] "Event steps calculation time: 2.1 seconds" [1] "Total epoch/event creation time: 145.82 seconds" [ FAIL 4 | WARN 4 | SKIP 0 | PASS 30 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-MPI_calibrate.R:136:3'): (code run outside of `test_that()`) ─── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. └─base::eval(...) 2. └─base::eval(...) 3. └─GENEAcore::create_MPI(binfile, binfile_path, output_folder) at test-MPI_calibrate.R:136:3 4. └─base::saveRDS(...) 5. └─base::gzfile(file, mode) ── Error ('test-MPI_create.R:23:3'): (code run outside of `test_that()`) ─────── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. └─base::eval(...) 2. └─base::eval(...) 3. └─GENEAcore::create_MPI(binfile_10Hz, binfile_name, output_folder) at test-MPI_create.R:23:3 4. └─base::saveRDS(...) 5. └─base::gzfile(file, mode) ── Error ('test-sample_binfile.R:26:3'): (code run outside of `test_that()`) ─── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. └─base::eval(...) 2. └─base::eval(...) 3. └─GENEAcore::sample_binfile(binfile, binfile_path, output_folder) at test-sample_binfile.R:26:3 4. └─GENEAcore::create_MPI(binfile, binfile_path, output_folder) 5. └─base::saveRDS(...) 6. └─base::gzfile(file, mode) ── Error ('test-step_counter.R:14:3'): (code run outside of `test_that()`) ───── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. └─base::eval(...) 2. └─base::eval(...) 3. └─GENEAcore::create_MPI(binfile_50, binfile_path_50, output_folder) at test-step_counter.R:14:3 4. └─base::saveRDS(...) 5. └─base::gzfile(file, mode) [ FAIL 4 | WARN 4 | SKIP 0 | PASS 30 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.0.0
Check: tests
Result: ERROR Running ‘testthat.R’ [210s/278s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(GENEAcore) > > test_check("GENEAcore") Processing file 1/1 : 10Hz_calibration_file.bin [1] "File read time: 0.08 seconds" [1] "MPI creation time: 0.01 seconds" [1] "Non-movement detection time: 0.65 seconds" [1] "Auto-calibration calculation time: 0.77 seconds" [1] "Transitions detection time: 3.17 seconds" Processing Day 1 of 2 Start_index: 0 End_index: 287990 [1] "Reading 287990 rows of raw data time: 1.62 seconds" [1] "Apply calibration time: 0.11 seconds" [1] "Apply calculations time: 1.39 seconds" [1] "Epoch creation time: 10.95 seconds" [1] "Epoch steps calculation time: 63.46 seconds" [1] "Event creation time: 0.57 seconds" [1] "Event steps calculation time: 4.25 seconds" Processing Day 2 of 2 Start_index: 287990 End_index: 503990 [1] "Reading 216000 rows of raw data time: 1.17 seconds" [1] "Apply calibration time: 0.06 seconds" [1] "Apply calculations time: 0.81 seconds" [1] "Epoch creation time: 8.29 seconds" [1] "Epoch steps calculation time: 102.06 seconds" [1] "Event creation time: 0.49 seconds" [1] "Event steps calculation time: 3.02 seconds" [1] "Total epoch/event creation time: 199.88 seconds" [ FAIL 4 | WARN 4 | SKIP 0 | PASS 30 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-MPI_calibrate.R:136:3'): (code run outside of `test_that()`) ─── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. └─base::eval(...) 2. └─base::eval(...) 3. └─GENEAcore::create_MPI(binfile, binfile_path, output_folder) at test-MPI_calibrate.R:136:3 4. └─base::saveRDS(...) 5. └─base::gzfile(file, mode) ── Error ('test-MPI_create.R:23:3'): (code run outside of `test_that()`) ─────── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. └─base::eval(...) 2. └─base::eval(...) 3. └─GENEAcore::create_MPI(binfile_10Hz, binfile_name, output_folder) at test-MPI_create.R:23:3 4. └─base::saveRDS(...) 5. └─base::gzfile(file, mode) ── Error ('test-sample_binfile.R:26:3'): (code run outside of `test_that()`) ─── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. └─base::eval(...) 2. └─base::eval(...) 3. └─GENEAcore::sample_binfile(binfile, binfile_path, output_folder) at test-sample_binfile.R:26:3 4. └─GENEAcore::create_MPI(binfile, binfile_path, output_folder) 5. └─base::saveRDS(...) 6. └─base::gzfile(file, mode) ── Error ('test-step_counter.R:14:3'): (code run outside of `test_that()`) ───── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. └─base::eval(...) 2. └─base::eval(...) 3. └─GENEAcore::create_MPI(binfile_50, binfile_path_50, output_folder) at test-step_counter.R:14:3 4. └─base::saveRDS(...) 5. └─base::gzfile(file, mode) [ FAIL 4 | WARN 4 | SKIP 0 | PASS 30 ] Error: Test failures Execution halted Flavor: r-patched-linux-x86_64

Version: 1.0.0
Check: tests
Result: ERROR Running ‘testthat.R’ [183s/211s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(GENEAcore) > > test_check("GENEAcore") Processing file 1/1 : 10Hz_calibration_file.bin [1] "File read time: 0.09 seconds" [1] "MPI creation time: 0.01 seconds" [1] "Non-movement detection time: 0.68 seconds" [1] "Auto-calibration calculation time: 0.78 seconds" [1] "Transitions detection time: 3.2 seconds" Processing Day 1 of 2 Start_index: 0 End_index: 287990 [1] "Reading 287990 rows of raw data time: 1.62 seconds" [1] "Apply calibration time: 0.18 seconds" [1] "Apply calculations time: 1.28 seconds" [1] "Epoch creation time: 11.41 seconds" [1] "Epoch steps calculation time: 64.1 seconds" [1] "Event creation time: 0.57 seconds" [1] "Event steps calculation time: 3.97 seconds" Processing Day 2 of 2 Start_index: 287990 End_index: 503990 [1] "Reading 216000 rows of raw data time: 1.16 seconds" [1] "Apply calibration time: 0.05 seconds" [1] "Apply calculations time: 0.8 seconds" [1] "Epoch creation time: 7.8 seconds" [1] "Epoch steps calculation time: 75.72 seconds" [1] "Event creation time: 0.5 seconds" [1] "Event steps calculation time: 3.11 seconds" [1] "Total epoch/event creation time: 173.81 seconds" [ FAIL 4 | WARN 4 | SKIP 0 | PASS 30 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-MPI_calibrate.R:136:3'): (code run outside of `test_that()`) ─── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. └─base::eval(...) 2. └─base::eval(...) 3. └─GENEAcore::create_MPI(binfile, binfile_path, output_folder) at test-MPI_calibrate.R:136:3 4. └─base::saveRDS(...) 5. └─base::gzfile(file, mode) ── Error ('test-MPI_create.R:23:3'): (code run outside of `test_that()`) ─────── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. └─base::eval(...) 2. └─base::eval(...) 3. └─GENEAcore::create_MPI(binfile_10Hz, binfile_name, output_folder) at test-MPI_create.R:23:3 4. └─base::saveRDS(...) 5. └─base::gzfile(file, mode) ── Error ('test-sample_binfile.R:26:3'): (code run outside of `test_that()`) ─── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. └─base::eval(...) 2. └─base::eval(...) 3. └─GENEAcore::sample_binfile(binfile, binfile_path, output_folder) at test-sample_binfile.R:26:3 4. └─GENEAcore::create_MPI(binfile, binfile_path, output_folder) 5. └─base::saveRDS(...) 6. └─base::gzfile(file, mode) ── Error ('test-step_counter.R:14:3'): (code run outside of `test_that()`) ───── Error in `gzfile(file, mode)`: cannot open the connection Backtrace: ▆ 1. └─base::eval(...) 2. └─base::eval(...) 3. └─GENEAcore::create_MPI(binfile_50, binfile_path_50, output_folder) at test-step_counter.R:14:3 4. └─base::saveRDS(...) 5. └─base::gzfile(file, mode) [ FAIL 4 | WARN 4 | SKIP 0 | PASS 30 ] Error: Test failures Execution halted Flavor: r-release-linux-x86_64

Version: 1.0.0
Check: installed package size
Result: NOTE installed size is 9.4Mb sub-directories of 1Mb or more: doc 1.1Mb extdata 8.2Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64