CRAN Package Check Results for Package EFAtools

Last updated on 2025-12-28 01:48:38 CET.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	0.6.1	73.19	368.54	441.73	ERROR
r-devel-linux-x86_64-debian-gcc	0.6.1	44.19	263.41	307.60	ERROR
r-devel-linux-x86_64-fedora-clang	0.6.1	134.00	621.17	755.17	NOTE
r-devel-linux-x86_64-fedora-gcc	0.6.1	91.00	399.52	490.52	NOTE
r-devel-windows-x86_64	0.6.1	84.00	409.00	493.00	OK
r-patched-linux-x86_64	0.6.1	73.74	369.59	443.33	OK
r-release-linux-x86_64	0.6.1	69.06	361.00	430.06	OK
r-release-macos-arm64	0.6.1				OK
r-release-macos-x86_64	0.6.1	42.00	368.00	410.00	OK
r-release-windows-x86_64	0.6.1	86.00	407.00	493.00	OK
r-oldrel-macos-arm64	0.6.1				OK
r-oldrel-macos-x86_64	0.6.1	41.00	313.00	354.00	OK
r-oldrel-windows-x86_64	0.6.1	104.00	540.00	644.00	OK

Check Details

Version: 0.6.1
Check: examples
Result: ERROR Running examples in ‘EFAtools-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: OMEGA > ### Title: McDonald's omega > ### Aliases: OMEGA > > ### ** Examples > > > ## Use with an output from the SL function, with type EFAtools > efa_mod <- EFA(test_models$baseline$cormat, N = 500, n_factors = 3, + type = "EFAtools", method = "PAF", rotation = "promax") > sl_mod <- SL(efa_mod, type = "EFAtools", method = "PAF") > > # Two examples how to specify the indicator-to-factor correspondences: > > # Based on a specific salience threshold for the loadings (here: .20): > factor_corres_1 <- sl_mod$sl[, c("F1", "F2", "F3")] >= .2 > > # Or more flexibly (could also be TRUE and FALSE instead of 0 and 1): > factor_corres_2 <- matrix(c(rep(0, 12), rep(1, 6), rep(0, 6), rep(1, 6), + rep(0, 6), rep(1, 6), rep(0, 12)), ncol = 3, + byrow = FALSE) > > OMEGA(sl_mod, type = "EFAtools", factor_corres = factor_corres_1) Omega total, omega hierarchical, omega subscale, H index, explained common variance (ECV), and percent of uncontaminated correlations (PUC) for the general factor (top row) and omegas and H index for the group factors: tot hier sub H ECV PUC g 0.883 0.740 0.125 0.842 0.659 0.706 F1 0.769 0.500 0.269 0.463 F2 0.763 0.494 0.270 0.472 F3 0.744 0.519 0.225 0.408 > > ## Use with an output from the psych::schmid function, with type psych for > ## OMEGA > schmid_mod <- psych::schmid(test_models$baseline$cormat, nfactors = 3, + n.obs = 500, fm = "pa", rotate = "Promax") > # Find correlation matrix from phi and pattern matrix from psych::schmid output > OMEGA(schmid_mod, type = "psych") Error in xtfrm.data.frame(list(`1` = 0.0378603062522911, `2` = 0.0133470820794105, : cannot xtfrm data frames Calls: OMEGA -> .OMEGA_FLEX -> xtfrm -> xtfrm.data.frame Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.6.1
Check: tests
Result: ERROR Running ‘testthat.R’ [149s/192s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(EFAtools) > > test_check("EFAtools") 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🏃 Averaging data... Done! 🏃 Extracting data... 🏃 Averaging data... Done! 🏃 Extracting data... 🏃 Averaging data... Done! Saving _problems/test-OMEGA-22.R Saving _problems/test-OMEGA_helper-173.R [ FAIL 2 | WARN 0 | SKIP 0 | PASS 2215 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-OMEGA.R:22:1'): (code run outside of `test_that()`) ──────────── Error in `xtfrm.data.frame(structure(list(`1` = 0.0378603062522911, `2` = 0.0133470820794105, `3` = 0.338365397997874), row.names = "V1", class = "data.frame"))`: cannot xtfrm data frames Backtrace: ▆ 1. └─EFAtools::OMEGA(schmid_mod, type = "psych") at test-OMEGA.R:22:1 2. └─EFAtools:::.OMEGA_FLEX(...) 3. ├─base::xtfrm(`<df[,3]>`) 4. └─base::xtfrm.data.frame(`<df[,3]>`) ── Error ('test-OMEGA_helper.R:173:1'): (code run outside of `test_that()`) ──── Error in `xtfrm.data.frame(structure(list(`1` = 0.0378603062522911, `2` = 0.0133470820794105, `3` = 0.338365397997874), row.names = "V1", class = "data.frame"))`: cannot xtfrm data frames Backtrace: ▆ 1. └─EFAtools:::.OMEGA_FLEX(schmid_mod, type = "psych", variance = "correlation") at test-OMEGA_helper.R:173:1 2. ├─base::xtfrm(`<df[,3]>`) 3. └─base::xtfrm.data.frame(`<df[,3]>`) [ FAIL 2 | WARN 0 | SKIP 0 | PASS 2215 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.6.1
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘EFAtools.Rmd’ using rmarkdown Quitting from EFAtools.Rmd:254-256 [unnamed-chunk-24] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `xtfrm.data.frame()`: ! cannot xtfrm data frames --- Backtrace: ▆ 1. └─EFAtools::OMEGA(sl_dospert, type = "psych") 2. └─EFAtools:::.OMEGA_FLEX(...) 3. ├─base::xtfrm(`<df[,6]>`) 4. └─base::xtfrm.data.frame(`<df[,6]>`) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'EFAtools.Rmd' failed with diagnostics: cannot xtfrm data frames --- failed re-building ‘EFAtools.Rmd’ --- re-building ‘Replicate_SPSS_psych.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘Replicate_SPSS_psych.Rmd’ SUMMARY: processing the following file failed: ‘EFAtools.Rmd’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.6.1
Check: tests
Result: ERROR Running ‘testthat.R’ [90s/105s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(EFAtools) > > test_check("EFAtools") 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🚶 Reordering factors... 🏃 Averaging data... Done! 🏃 Extracting data... 🏃 Averaging data... Done! 🏃 Extracting data... 🏃 Averaging data... Done! 🏃 Extracting data... 🏃 Averaging data... Done! Saving _problems/test-OMEGA-22.R Saving _problems/test-OMEGA_helper-173.R [ FAIL 2 | WARN 0 | SKIP 0 | PASS 2215 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-OMEGA.R:22:1'): (code run outside of `test_that()`) ──────────── Error in `xtfrm.data.frame(structure(list(`1` = 0.0378603062522911, `2` = 0.0133470820794105, `3` = 0.338365397997874), row.names = "V1", class = "data.frame"))`: cannot xtfrm data frames Backtrace: ▆ 1. └─EFAtools::OMEGA(schmid_mod, type = "psych") at test-OMEGA.R:22:1 2. └─EFAtools:::.OMEGA_FLEX(...) 3. ├─base::xtfrm(`<df[,3]>`) 4. └─base::xtfrm.data.frame(`<df[,3]>`) ── Error ('test-OMEGA_helper.R:173:1'): (code run outside of `test_that()`) ──── Error in `xtfrm.data.frame(structure(list(`1` = 0.0378603062522911, `2` = 0.0133470820794105, `3` = 0.338365397997874), row.names = "V1", class = "data.frame"))`: cannot xtfrm data frames Backtrace: ▆ 1. └─EFAtools:::.OMEGA_FLEX(schmid_mod, type = "psych", variance = "correlation") at test-OMEGA_helper.R:173:1 2. ├─base::xtfrm(`<df[,3]>`) 3. └─base::xtfrm.data.frame(`<df[,3]>`) [ FAIL 2 | WARN 0 | SKIP 0 | PASS 2215 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.6.1
Check: dependencies in R code
Result: NOTE Namespace in Imports field not imported from: ‘progress’ All declared Imports should be used. Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc