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CRAN Package Check Results for Package BayesianFitForecast

Last updated on 2026-10-13 05:51:29 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.1 14.48 357.24 371.72 OK
r-devel-linux-x86_64-debian-gcc 1.1.1 9.71 350.31 360.02 OK
r-devel-linux-x86_64-fedora-clang 1.1.1 10.00 173.66 183.66 OK
r-devel-linux-x86_64-fedora-gcc 1.1.1 10.00 212.89 222.89 OK
r-devel-windows-x86_64 1.1.1 15.00 181.00 196.00 ERROR
r-patched-linux-x86_64 1.1.1 13.83 361.57 375.40 OK
r-release-linux-x86_64 1.1.1 14.93 357.20 372.13 OK
r-release-macos-arm64 1.1.1 3.00 88.00 91.00 OK
r-release-macos-x86_64 1.1.1 10.00 329.00 339.00 OK
r-release-windows-x86_64 1.1.1 14.00 173.00 187.00 ERROR
r-oldrel-macos-arm64 1.1.1 3.00 82.00 85.00 OK
r-oldrel-macos-x86_64 1.1.1 10.00 528.00 538.00 OK
r-oldrel-windows-x86_64 1.1.1 18.00 213.00 231.00 ERROR

Check Details

Version: 1.1.1
Check: tests
Result: ERROR Running 'testthat.R' [68s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(BayesianFitForecast) > > test_check("BayesianFitForecast") Option file path: D:/RCompile/CRANpkg/lib/4.7/BayesianFitForecast/extdata/option.R Excel file path: D:/RCompile/CRANpkg/lib/4.7/BayesianFitForecast/extdata/SanFrancisco.xlsx Output path: D:\temp\2026_09_24_01_50_00_23554\Rtmpq80w97 Loading required package: StanHeaders rstan version 2.32.7 (Stan version 2.39.0) For execution on a local, multicore CPU with excess RAM we recommend calling options(mc.cores = parallel::detectCores()). To avoid recompilation of unchanged Stan programs, we recommend calling rstan_options(auto_write = TRUE) For within-chain threading using `reduce_sum()` or `map_rect()` Stan functions, change `threads_per_chain` option: rstan_options(threads_per_chain = 1) Do not specify '-march=native' in 'LOCAL_CPPFLAGS' or a Makevars file specified C++17 make cmd is make -f "D:/RCompile/recent/R/etc/x64/Makeconf" -f "D:/RCompile/recent/R/share/make/winshlib.mk" CXX='$(CXX17) $(CXX17STD)' CXXFLAGS='$(CXX17FLAGS)' CXXPICFLAGS='$(CXX17PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX17LDFLAGS)' SHLIB_LD='$(SHLIB_CXX17LD)' SHLIB="file4be685cf77daa.dll" WIN=64 TCLBIN= OBJECTS="file4be685cf77daa.o" make would use make[1]: Entering directory '/d/temp/2026_09_24_01_50_00_23554/Rtmpq80w97' g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"D:/RCompile/CRANpkg/lib/4.7/Rcpp/include/" -I"D:/temp/2026_09_24_01_50_00_23554/Rtmpi0C2mc/RLIBS_4a4201726990/RcppEigen/include/" -I"D:/temp/2026_09_24_01_50_00_23554/Rtmpi0C2mc/RLIBS_4a4201726990/RcppEigen/include/unsupported" -I"D:/temp/2026_09_24_01_50_00_23554/Rtmpi0C2mc/RLIBS_4a4201726990/BH/include" -I"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/src/" -I"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/" -I"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/include/" -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -ID:/RCompile/CRANpkg/lib/4.7/RcppParallel/include -I"D:/RCompile/CRANpkg/lib/4.7/rstan/include" -DEIGEN_NO_DEBUG -DBOOST_DISABLE_ASSERTS -DBOOST_PENDING_INTEGER_LOG2_HPP -DSTAN_THREADS -DUSE_STANC3 -DSTRICT_R_HEADERS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -include "D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/stan/math/prim/fun/Eigen.hpp" -std=c++1y -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c file4be685cf77daa.cpp -o file4be685cf77daa.o if test "zfile4be685cf77daa.o" != "z"; then \ if test -e "file4be685cf77daa-win.def"; then \ echo g++ -shared -s -static-libgcc -o file4be685cf77daa.dll file4be685cf77daa-win.def file4be685cf77daa.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \ g++ -shared -s -static-libgcc -o file4be685cf77daa.dll file4be685cf77daa-win.def file4be685cf77daa.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \ else \ echo EXPORTS > tmp.def; \ nm file4be685cf77daa.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \ echo g++ -shared -s -static-libgcc -o file4be685cf77daa.dll tmp.def file4be685cf77daa.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \ g++ -shared -s -static-libgcc -o file4be685cf77daa.dll tmp.def file4be685cf77daa.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \ rm -f tmp.def; \ fi \ fi make[1]: Leaving directory '/d/temp/2026_09_24_01_50_00_23554/Rtmpq80w97' Saving _problems/test-Run_MCMC-27.R Data file path: D:/RCompile/CRANpkg/lib/4.7/BayesianFitForecast/extdata Option file path: D:/RCompile/CRANpkg/lib/4.7/BayesianFitForecast/extdata/option.R Excel file path: D:/RCompile/CRANpkg/lib/4.7/BayesianFitForecast/extdata/SanFrancisco.xlsx Output path: D:\temp\2026_09_24_01_50_00_23554\Rtmpq80w97 This is bayesplot version 1.16.0 - Online documentation and vignettes at mc-stan.org/bayesplot - bayesplot theme set to bayesplot::theme_default() * Does _not_ affect other ggplot2 plots * See ?bayesplot_theme_set for details on theme setting Loaded file: D:\RCompile\CRANpkg\lib\4.7\BayesianFitForecast\extdata/Bayesian-uniform-cal-17-fcst-0-poisson-sanfrancisco-fit.Rdata No time-dependent templates provided — skipping time-dependent plots. [ FAIL 1 | WARN 6 | SKIP 0 | PASS 8 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-Run_MCMC.R:25:5'): Run_MCMC works with example files ─────────── Error in `sink(type = "output")`: invalid connection Backtrace: ▆ 1. ├─base::eval(...) 2. │ └─base::eval(...) 3. │ ├─testthat::expect_no_error(Run_MCMC(option_file, excel_file, output_path)) at test-Run_MCMC.R:25:5 4. │ │ └─testthat:::expect_no_(...) 5. │ │ └─testthat:::quasi_capture(enquo(object), NULL, capture) 6. │ │ ├─testthat (local) .capture(...) 7. │ │ │ ├─base::withRestarts(...) 8. │ │ │ │ └─base (local) withOneRestart(expr, restarts[[1L]]) 9. │ │ │ │ └─base (local) doWithOneRestart(return(expr), restart) 10. │ │ │ └─base::withCallingHandlers(...) 11. │ │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 12. │ └─BayesianFitForecast::Run_MCMC(option_file, excel_file, output_path) 13. │ ├─base::tryCatch(...) 14. │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers) 15. │ └─base::source(temp_file, local = FALSE) 16. │ ├─base::withVisible(eval(ei, envir)) 17. │ └─base::eval(ei, envir) 18. │ └─base::eval(ei, envir) 19. └─rstan::stan_model(file.path(output_path, "ode_model.stan")) 20. └─rstan:::cxxfunctionplus(...) 21. └─base::sink(type = "output") [ FAIL 1 | WARN 6 | SKIP 0 | PASS 8 ] Error: ! Test failures. Execution halted Flavor: r-devel-windows-x86_64

Version: 1.1.1
Check: tests
Result: ERROR Running 'testthat.R' [73s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(BayesianFitForecast) > > test_check("BayesianFitForecast") Option file path: D:/RCompile/CRANpkg/lib/4.6/BayesianFitForecast/extdata/option.R Excel file path: D:/RCompile/CRANpkg/lib/4.6/BayesianFitForecast/extdata/SanFrancisco.xlsx Output path: D:\temp\2026_09_29_12_06_12_14923\RtmpQXCcim Loading required package: StanHeaders rstan version 2.32.7 (Stan version 2.39.0) For execution on a local, multicore CPU with excess RAM we recommend calling options(mc.cores = parallel::detectCores()). To avoid recompilation of unchanged Stan programs, we recommend calling rstan_options(auto_write = TRUE) For within-chain threading using `reduce_sum()` or `map_rect()` Stan functions, change `threads_per_chain` option: rstan_options(threads_per_chain = 1) Do not specify '-march=native' in 'LOCAL_CPPFLAGS' or a Makevars file specified C++17 make cmd is make -f "D:/RCompile/recent/R-4.6.1/etc/x64/Makeconf" -f "D:/RCompile/recent/R-4.6.1/share/make/winshlib.mk" CXX='$(CXX17) $(CXX17STD)' CXXFLAGS='$(CXX17FLAGS)' CXXPICFLAGS='$(CXX17PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX17LDFLAGS)' SHLIB_LD='$(SHLIB_CXX17LD)' SHLIB="file5a828164d33b6.dll" WIN=64 TCLBIN= OBJECTS="file5a828164d33b6.o" make would use make[1]: Entering directory '/d/temp/2026_09_29_12_06_12_14923/RtmpQXCcim' g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.6.1/include" -DNDEBUG -I"D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/" -I"D:/temp/2026_09_29_12_06_12_14923/RtmpOe7qhN/RLIBS_4861c6eef66c/RcppEigen/include/" -I"D:/temp/2026_09_29_12_06_12_14923/RtmpOe7qhN/RLIBS_4861c6eef66c/RcppEigen/include/unsupported" -I"D:/temp/2026_09_29_12_06_12_14923/RtmpOe7qhN/RLIBS_4861c6eef66c/BH/include" -I"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/include/src/" -I"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/include/" -I"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/include/" -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -ID:/RCompile/CRANpkg/lib/4.6/RcppParallel/include -I"D:/RCompile/CRANpkg/lib/4.6/rstan/include" -DEIGEN_NO_DEBUG -DBOOST_DISABLE_ASSERTS -DBOOST_PENDING_INTEGER_LOG2_HPP -DSTAN_THREADS -DUSE_STANC3 -DSTRICT_R_HEADERS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -include "D:/RCompile/CRANpkg/lib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp" -std=c++1y -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c file5a828164d33b6.cpp -o file5a828164d33b6.o if test "zfile5a828164d33b6.o" != "z"; then \ if test -e "file5a828164d33b6-win.def"; then \ echo g++ -shared -s -static-libgcc -o file5a828164d33b6.dll file5a828164d33b6-win.def file5a828164d33b6.o "D:/RCompile/CRANpkg/lib/4.6/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.6.1/bin/x64" -lR ; \ g++ -shared -s -static-libgcc -o file5a828164d33b6.dll file5a828164d33b6-win.def file5a828164d33b6.o "D:/RCompile/CRANpkg/lib/4.6/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.6.1/bin/x64" -lR ; \ else \ echo EXPORTS > tmp.def; \ nm file5a828164d33b6.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \ echo g++ -shared -s -static-libgcc -o file5a828164d33b6.dll tmp.def file5a828164d33b6.o "D:/RCompile/CRANpkg/lib/4.6/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.6.1/bin/x64" -lR ; \ g++ -shared -s -static-libgcc -o file5a828164d33b6.dll tmp.def file5a828164d33b6.o "D:/RCompile/CRANpkg/lib/4.6/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.6.1/bin/x64" -lR ; \ rm -f tmp.def; \ fi \ fi make[1]: Leaving directory '/d/temp/2026_09_29_12_06_12_14923/RtmpQXCcim' Saving _problems/test-Run_MCMC-27.R Data file path: D:/RCompile/CRANpkg/lib/4.6/BayesianFitForecast/extdata Option file path: D:/RCompile/CRANpkg/lib/4.6/BayesianFitForecast/extdata/option.R Excel file path: D:/RCompile/CRANpkg/lib/4.6/BayesianFitForecast/extdata/SanFrancisco.xlsx Output path: D:\temp\2026_09_29_12_06_12_14923\RtmpQXCcim This is bayesplot version 1.16.0 - Online documentation and vignettes at mc-stan.org/bayesplot - bayesplot theme set to bayesplot::theme_default() * Does _not_ affect other ggplot2 plots * See ?bayesplot_theme_set for details on theme setting Loaded file: D:\RCompile\CRANpkg\lib\4.6\BayesianFitForecast\extdata/Bayesian-uniform-cal-17-fcst-0-poisson-sanfrancisco-fit.Rdata No time-dependent templates provided — skipping time-dependent plots. [ FAIL 1 | WARN 6 | SKIP 0 | PASS 8 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-Run_MCMC.R:25:5'): Run_MCMC works with example files ─────────── Error in `sink(type = "output")`: invalid connection Backtrace: ▆ 1. ├─base::eval(...) 2. │ └─base::eval(...) 3. │ ├─testthat::expect_no_error(Run_MCMC(option_file, excel_file, output_path)) at test-Run_MCMC.R:25:5 4. │ │ └─testthat:::expect_no_(...) 5. │ │ └─testthat:::quasi_capture(enquo(object), NULL, capture) 6. │ │ ├─testthat (local) .capture(...) 7. │ │ │ ├─base::withRestarts(...) 8. │ │ │ │ └─base (local) withOneRestart(expr, restarts[[1L]]) 9. │ │ │ │ └─base (local) doWithOneRestart(return(expr), restart) 10. │ │ │ └─base::withCallingHandlers(...) 11. │ │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 12. │ └─BayesianFitForecast::Run_MCMC(option_file, excel_file, output_path) 13. │ ├─base::tryCatch(...) 14. │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers) 15. │ └─base::source(temp_file, local = FALSE) 16. │ ├─base::withVisible(eval(ei, envir)) 17. │ └─base::eval(ei, envir) 18. │ └─base::eval(ei, envir) 19. └─rstan::stan_model(file.path(output_path, "ode_model.stan")) 20. └─rstan:::cxxfunctionplus(...) 21. └─base::sink(type = "output") [ FAIL 1 | WARN 6 | SKIP 0 | PASS 8 ] Error: ! Test failures. Execution halted Flavor: r-release-windows-x86_64

Version: 1.1.1
Check: tests
Result: ERROR Running 'testthat.R' [88s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(BayesianFitForecast) > > test_check("BayesianFitForecast") Option file path: D:/RCompile/CRANpkg/lib/4.5/BayesianFitForecast/extdata/option.R Excel file path: D:/RCompile/CRANpkg/lib/4.5/BayesianFitForecast/extdata/SanFrancisco.xlsx Output path: D:\temp\2026_10_09_10_23_25_30964\Rtmpm0ZdMk Loading required package: StanHeaders rstan version 2.32.7 (Stan version 2.39.0) For execution on a local, multicore CPU with excess RAM we recommend calling options(mc.cores = parallel::detectCores()). To avoid recompilation of unchanged Stan programs, we recommend calling rstan_options(auto_write = TRUE) For within-chain threading using `reduce_sum()` or `map_rect()` Stan functions, change `threads_per_chain` option: rstan_options(threads_per_chain = 1) Do not specify '-march=native' in 'LOCAL_CPPFLAGS' or a Makevars file make cmd is make -f "D:/RCompile/recent/R-4.5.3/etc/x64/Makeconf" -f "D:/RCompile/recent/R-4.5.3/share/make/winshlib.mk" CXX='$(CXX17) $(CXX17STD)' CXXFLAGS='$(CXX17FLAGS)' CXXPICFLAGS='$(CXX17PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX17LDFLAGS)' SHLIB_LD='$(SHLIB_CXX17LD)' SHLIB="file5043850045dad.dll" WIN=64 TCLBIN= OBJECTS="file5043850045dad.o" make would use make[1]: Entering directory '/d/temp/2026_10_09_10_23_25_30964/Rtmpm0ZdMk' g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -I"D:/RCompile/CRANpkg/lib/4.5/Rcpp/include/" -I"D:/temp/2026_10_09_10_23_25_30964/RtmpMN87wF/RLIBS_8830ff02484/RcppEigen/include/" -I"D:/temp/2026_10_09_10_23_25_30964/RtmpMN87wF/RLIBS_8830ff02484/RcppEigen/include/unsupported" -I"D:/temp/2026_10_09_10_23_25_30964/RtmpMN87wF/RLIBS_8830ff02484/BH/include" -I"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/src/" -I"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/" -I"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include/" -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -ID:/RCompile/CRANpkg/lib/4.5/RcppParallel/include -I"D:/RCompile/CRANpkg/lib/4.5/rstan/include" -DEIGEN_NO_DEBUG -DBOOST_DISABLE_ASSERTS -DBOOST_PENDING_INTEGER_LOG2_HPP -DSTAN_THREADS -DUSE_STANC3 -DSTRICT_R_HEADERS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -include "D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/stan/math/prim/fun/Eigen.hpp" -std=c++1y -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c file5043850045dad.cpp -o file5043850045dad.o if test "zfile5043850045dad.o" != "z"; then \ if test -e "file5043850045dad-win.def"; then \ echo g++ -shared -s -static-libgcc -o file5043850045dad.dll file5043850045dad-win.def file5043850045dad.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \ g++ -shared -s -static-libgcc -o file5043850045dad.dll file5043850045dad-win.def file5043850045dad.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \ else \ echo EXPORTS > tmp.def; \ nm file5043850045dad.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \ echo g++ -shared -s -static-libgcc -o file5043850045dad.dll tmp.def file5043850045dad.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \ g++ -shared -s -static-libgcc -o file5043850045dad.dll tmp.def file5043850045dad.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \ rm -f tmp.def; \ fi \ fi make[1]: Leaving directory '/d/temp/2026_10_09_10_23_25_30964/Rtmpm0ZdMk' Saving _problems/test-Run_MCMC-27.R Data file path: D:/RCompile/CRANpkg/lib/4.5/BayesianFitForecast/extdata Option file path: D:/RCompile/CRANpkg/lib/4.5/BayesianFitForecast/extdata/option.R Excel file path: D:/RCompile/CRANpkg/lib/4.5/BayesianFitForecast/extdata/SanFrancisco.xlsx Output path: D:\temp\2026_10_09_10_23_25_30964\Rtmpm0ZdMk This is bayesplot version 1.16.0 - Online documentation and vignettes at mc-stan.org/bayesplot - bayesplot theme set to bayesplot::theme_default() * Does _not_ affect other ggplot2 plots * See ?bayesplot_theme_set for details on theme setting Loaded file: D:\RCompile\CRANpkg\lib\4.5\BayesianFitForecast\extdata/Bayesian-uniform-cal-17-fcst-0-poisson-sanfrancisco-fit.Rdata No time-dependent templates provided — skipping time-dependent plots. [ FAIL 1 | WARN 6 | SKIP 0 | PASS 8 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-Run_MCMC.R:25:5'): Run_MCMC works with example files ─────────── Error in `sink(type = "output")`: invalid connection Backtrace: ▆ 1. ├─base::eval(...) 2. │ └─base::eval(...) 3. │ ├─testthat::expect_no_error(Run_MCMC(option_file, excel_file, output_path)) at test-Run_MCMC.R:25:5 4. │ │ └─testthat:::expect_no_(...) 5. │ │ └─testthat:::quasi_capture(enquo(object), NULL, capture) 6. │ │ ├─testthat (local) .capture(...) 7. │ │ │ ├─base::withRestarts(...) 8. │ │ │ │ └─base (local) withOneRestart(expr, restarts[[1L]]) 9. │ │ │ │ └─base (local) doWithOneRestart(return(expr), restart) 10. │ │ │ └─base::withCallingHandlers(...) 11. │ │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 12. │ └─BayesianFitForecast::Run_MCMC(option_file, excel_file, output_path) 13. │ ├─base::tryCatch(...) 14. │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers) 15. │ └─base::source(temp_file, local = FALSE) 16. │ ├─base::withVisible(eval(ei, envir)) 17. │ └─base::eval(ei, envir) 18. │ └─base::eval(ei, envir) 19. └─rstan::stan_model(file.path(output_path, "ode_model.stan")) 20. └─rstan:::cxxfunctionplus(...) 21. └─base::sink(type = "output") [ FAIL 1 | WARN 6 | SKIP 0 | PASS 8 ] Error: ! Test failures. Execution halted Flavor: r-oldrel-windows-x86_64

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