staRdom: PARAFAC Analysis of EEMs from DOM

This is a user-friendly way to run a parallel factor (PARAFAC) analysis (Harshman, 1971) <doi:10.1121/1.1977523> on excitation emission matrix (EEM) data from dissolved organic matter (DOM) samples (Murphy et al., 2013) <doi:10.1039/c3ay41160e>. The analysis includes profound methods for model validation. Some additional functions allow the calculation of absorbance slope parameters and create beautiful plots.

Version:	1.1.28
Depends:	R (≥ 4.3), ggplot2 (≥ 3.4.2), eemR (≥ 1.0.1), parallel (≥ 4.3)
Imports:	dplyr (≥ 1.1.2), tidyr (≥ 1.3.0), stringr (≥ 1.5.0), pracma (≥ 2.3.3), zoo (≥ 1.8-12), tibble (≥ 3.2.1), multiway (≥ 1.0-6), GGally (≥ 2.1.2), graphics (≥ 4.3), doParallel (≥ 1.0.16), drc (≥ 3.0-1), foreach (≥ 1.5.1), data.table (≥ 1.14.8), matrixStats (≥ 1.0.0), MBA (≥ 0.1-0), cdom (≥ 0.1.0), R.matlab (≥ 3.7.0), readr (≥ 2.1.4), gtools (≥ 3.9.4), viridisLite (≥ 0.4.2)
Suggests:	plotly (≥ 4.9.3), xlsx (≥ 0.6.5), knitr (≥ 1.31), kableExtra (≥ 1.3.4), askpass (≥ 1.1), httr (≥ 1.4.2), rmarkdown (≥ 2.6)
Published:	2023-06-16
Author:	Matthias Pucher [aut, cre], Daniel Graeber [aut, ctb], Stefan Preiner [ctb], Renata Pinto [ctb]
Maintainer:	Matthias Pucher <matthias.pucher at gmx.net>
BugReports:	https://github.com/MatthiasPucher/staRdom/issues
License:	AGPL
URL:	https://cran.r-project.org/package=staRdom
NeedsCompilation:	no
Citation:	staRdom citation info
Materials:	README
CRAN checks:	staRdom results

Documentation:

Reference manual:	staRdom.pdf
Vignettes:	Correcting raw data, calculating peaks and indices in EEMS and absorbance (slope) parameters PARAFAC analysis of EEM data to separate DOM components in R

Downloads:

Package source:	staRdom_1.1.28.tar.gz
Windows binaries:	r-devel: staRdom_1.1.28.zip, r-release: staRdom_1.1.28.zip, r-oldrel: staRdom_1.1.28.zip
macOS binaries:	r-release (arm64): staRdom_1.1.28.tgz, r-oldrel (arm64): staRdom_1.1.28.tgz, r-release (x86_64): staRdom_1.1.28.tgz, r-oldrel (x86_64): staRdom_1.1.28.tgz
Old sources:	staRdom archive

Linking:

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