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Fit linear models based on periodic splines, moderate model coefficients using multivariate adaptive shrinkage, then compute properties of the moderated curves.
| Version: | 0.1.0 |
| Depends: | R (≥ 3.6) |
| Imports: | abind (≥ 1.4-5), ashr (≥ 2.2-54), checkmate (≥ 2.0.0), data.table (≥ 1.12.8), DESeq2 (≥ 1.30.0), foreach (≥ 1.5.0), HDInterval (≥ 0.2.2), iterators (≥ 1.0.12), limma (≥ 3.42.2), mashr (≥ 0.2.50), pbs (≥ 1.1), zeallot (≥ 0.1.0) |
| Suggests: | cowplot (≥ 1.1.1), knitr, doParallel (≥ 1.0.15), ggplot2 (≥ 3.3.5), glue (≥ 1.6.1), qs (≥ 0.24.1), rmarkdown, testthat (≥ 3.0.0) |
| Published: | 2023-01-26 |
| Author: | Jake Hughey [aut, cre], Dora Obodo [aut], Elliot Outland [aut] |
| Maintainer: | Jake Hughey <jakejhughey at gmail.com> |
| License: | GPL-2 |
| URL: | https://limorhyde2.hugheylab.org, https://github.com/hugheylab/limorhyde2 |
| NeedsCompilation: | no |
| Materials: | NEWS |
| CRAN checks: | limorhyde2 results |
| Package source: | limorhyde2_0.1.0.tar.gz |
| Windows binaries: | r-devel: limorhyde2_0.1.0.zip, r-release: limorhyde2_0.1.0.zip, r-oldrel: limorhyde2_0.1.0.zip |
| macOS binaries: | r-release (arm64): limorhyde2_0.1.0.tgz, r-oldrel (arm64): limorhyde2_0.1.0.tgz, r-release (x86_64): limorhyde2_0.1.0.tgz, r-oldrel (x86_64): limorhyde2_0.1.0.tgz |
| Old sources: | limorhyde2 archive |
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