An umbrella framework ("MoSaIC" = Multi-Omics Source-Agnostic
Integration Clustering in R) that unifies a large collection
of multi-source / multi-omics clustering methodologies behind a single,
consistent list-of-matrices interface. It spans five integration
paradigms - direct, similarity-based, graph-based, voting-based consensus,
and hierarchy-based - and bundles a complete downstream workflow for
method comparison and evaluation. The package features the multi-source
the ability to compare many algorithms on the same footing, a data-nugget
based feature-weighting scheme as a robust, big-data-friendly alternative to
variance weighting, and a downstream suite for cluster characterisation,
visualisation and biological interpretation.
| Version: |
0.1.0 |
| Depends: |
R (≥ 4.0) |
| Imports: |
stats, utils, methods, graphics, grDevices, cluster, fastcluster, matrixStats, FD, ade4, e1071, gtools, data.table, Rcpp, Rdpack |
| LinkingTo: |
Rcpp |
| Suggests: |
SNFtool, datanugget, WCluster, LUCIDus, igraph, lsa, analogue, FactoMineR, pls, circlize, gplots, dendextend, plotrix, limma, MLP, biomaRt, org.Hs.eg.db, Biobase, a4Core, a4Base, plyr, genefilter, ggplot2, gridExtra, uwot, Rtsne, MOFAdata, testthat (≥ 3.0.0), knitr, rmarkdown |
| Published: |
2026-07-29 |
| DOI: |
10.32614/CRAN.package.MosaiClusteR |
| Author: |
Bernard Isekah Osang'ir
 [aut, cre],
Marijke Van Moerbeke [aut],
Ziv Shkedy [ctb],
Surya Gupta [ctb],
Jürgen Claesen [ctb] |
| Maintainer: |
Bernard Isekah Osang'ir <bernard.osangir at sckcen.be> |
| BugReports: |
https://github.com/lucp12891/MosaiClusteR/issues |
| License: |
GPL-3 |
| URL: |
https://github.com/lucp12891/MosaiClusteR |
| NeedsCompilation: |
yes |
| Citation: |
MosaiClusteR citation info |
| Materials: |
README, NEWS |
| CRAN checks: |
MosaiClusteR results |