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CohortSurvival: Estimate Survival from Common Data Model Cohorts

Estimate survival using data mapped to the Observational Medical Outcomes Partnership common data model. Survival can be estimated based on user-defined study cohorts.

Version: 0.5.0
Imports: CDMConnector (≥ 1.3.0), omopgenerics (≥ 0.2.0), checkmate, cli, DBI, dplyr, dbplyr, magrittr, lubridate, broom, PatientProfiles, visOmopResults (≥ 0.3.0), rlang (≥ 0.4.11), survival, scales, stringr, tibble, tidyr
Suggests: testthat (≥ 3.0.0), CodelistGenerator, roxygen2, knitr, tictoc, rmarkdown, ggplot2, patchwork, cmprsk, duckdb, gt, flextable
Published: 2024-05-06
Author: Edward Burn ORCID iD [aut, cre], Kim Lopez ORCID iD [aut], Marti Catala ORCID iD [ctb], Xintong Li ORCID iD [ctb], Danielle Newby ORCID iD [ctb]
Maintainer: Edward Burn <edward.burn at ndorms.ox.ac.uk>
License: Apache License (≥ 2)
URL: https://darwin-eu-dev.github.io/CohortSurvival/
NeedsCompilation: no
Materials: README
CRAN checks: CohortSurvival results

Documentation:

Reference manual: CohortSurvival.pdf
Vignettes: a01_Single_event_of_interest
a02_Competing_risk_survival
a03_Further_survival_analyses

Downloads:

Package source: CohortSurvival_0.5.0.tar.gz
Windows binaries: r-devel: CohortSurvival_0.5.0.zip, r-release: CohortSurvival_0.5.0.zip, r-oldrel: CohortSurvival_0.5.0.zip
macOS binaries: r-release (arm64): CohortSurvival_0.5.0.tgz, r-oldrel (arm64): CohortSurvival_0.5.0.tgz, r-release (x86_64): CohortSurvival_0.5.0.tgz, r-oldrel (x86_64): CohortSurvival_0.5.0.tgz
Old sources: CohortSurvival archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.