Module Gnumed.business.gmGenericEMRItem
GNUmed clinical business object in generic form.
license: GPL v2 or later
Expand source code
# -*- coding: utf-8 -*-
"""GNUmed clinical business object in generic form.
license: GPL v2 or later
"""
#============================================================
__author__ = "<karsten.hilbert@gmx.net>"
import sys
import logging
if __name__ == '__main__':
sys.path.insert(0, '../../')
_ = lambda x:x
from Gnumed.pycommon import gmBusinessDBObject
from Gnumed.pycommon import gmPG2
from Gnumed.pycommon import gmTools
from Gnumed.pycommon import gmDateTime
from Gnumed.business import gmSoapDefs
from Gnumed.business.gmEMRStructItems import cHealthIssue
from Gnumed.business.gmEMRStructItems import cEncounter
from Gnumed.business.gmEMRStructItems import cEpisode
from Gnumed.business.gmEMRStructItems import cHospitalStay
from Gnumed.business.gmEMRStructItems import cPerformedProcedure
from Gnumed.business.gmExternalCare import cExternalCareItem
from Gnumed.business.gmVaccination import cVaccination
from Gnumed.business.gmClinNarrative import cNarrative
from Gnumed.business.gmMedication import cSubstanceIntakeEntry
from Gnumed.business.gmAllergy import cAllergy
from Gnumed.business.gmAllergy import cAllergyState
from Gnumed.business.gmFamilyHistory import cFamilyHistory
from Gnumed.business.gmAutoHints import cSuppressedHint
from Gnumed.business.gmAutoHints import cDynamicHint
from Gnumed.business.gmDocuments import cDocument
from Gnumed.business.gmProviderInbox import cInboxMessage
from Gnumed.business.gmPathLab import cTestResult
_log = logging.getLogger('gm.emr')
#============================================================
_MAP_generic_emr_item_table2type_str = {
'clin.encounter': _('Encounter'),
'clin.episode': _('Episode'),
'clin.health_issue': _('Health issue'),
'clin.external_care': _('External care'),
'clin.vaccination': _('Vaccination'),
'clin.clin_narrative': _('Progress note'),
'clin.test_result': _('Test result'),
'clin.substance_intake': _('Substance intake'),
'clin.hospital_stay': _('Hospital stay'),
'clin.procedure': _('Performed procedure'),
'clin.allergy': _('Allergy'),
'clin.allergy_state': _('Allergy state'),
'clin.family_history': _('Family history'),
'blobs.doc_med': _('Document'),
'dem.message_inbox': _('Inbox message'),
'ref.auto_hint': _('Dynamic hint')
}
_MAP_generic_emr_item_table2class = {
'clin.encounter': cEncounter,
'clin.episode': cEpisode,
'clin.health_issue': cHealthIssue,
'clin.external_care': cExternalCareItem,
'clin.vaccination': cVaccination,
'clin.clin_narrative': cNarrative,
'clin.test_result': cTestResult,
'clin.substance_intake': cSubstanceIntakeEntry,
'clin.hospital_stay': cHospitalStay,
'clin.procedure': cPerformedProcedure,
'clin.allergy': cAllergy,
'clin.allergy_state': cAllergyState,
'clin.family_history': cFamilyHistory,
'clin.suppressed_hint': cSuppressedHint,
'blobs.doc_med': cDocument,
'dem.message_inbox': cInboxMessage,
'ref.auto_hint': cDynamicHint
}
#============================================================
# generic items in clin.v_emr_journal
#------------------------------------------------------------
_SQL_get_generic_emr_items = """SELECT
to_char(c_vej.clin_when, 'YYYY-MM-DD') AS date,
c_vej.clin_when,
coalesce(c_vej.soap_cat, '') as soap_cat,
c_vej.narrative,
c_vej.src_table,
c_scr.rank AS scr,
c_vej.modified_when,
to_char(c_vej.modified_when, 'YYYY-MM-DD HH24:MI') AS date_modified,
c_vej.modified_by,
c_vej.row_version,
c_vej.pk_episode,
c_vej.pk_encounter,
c_vej.soap_cat as real_soap_cat,
c_vej.src_pk,
c_vej.pk_health_issue,
c_vej.health_issue,
c_vej.episode,
c_vej.issue_active,
c_vej.issue_clinically_relevant,
c_vej.episode_open,
c_vej.encounter_started,
c_vej.encounter_last_affirmed,
c_vej.encounter_l10n_type,
c_vej.pk_patient,
-1 AS xmin_dummy
FROM
clin.v_emr_journal c_vej
JOIN clin.soap_cat_ranks c_scr on (c_scr.soap_cat IS NOT DISTINCT FROM c_vej.soap_cat)
"""
_SQL_get_hints_as_generic_emr_items = """SELECT
to_char(now(), 'YYYY-MM-DD') AS date,
now() as clin_when,
'u'::text as soap_cat,
hints.title || E'\n' || hints.hint
as narrative,
-- .src_table does not correspond with the
-- .src_pk column source because it is generated
-- from clin.get_hints_for_patient()
'ref.auto_hint'::text as src_table,
c_scr.rank AS scr,
now() as modified_when,
to_char(now(), 'YYYY-MM-DD HH24:MI') AS date_modified,
current_user as modified_by,
0::integer as row_version,
NULL::integer as pk_episode,
%(pk_enc)s as pk_encounter,
'u'::text as real_soap_cat,
hints.pk_auto_hint as src_pk,
NULL::integer as pk_health_issue,
''::text as health_issue,
''::text as episode,
False as issue_active,
False as issue_clinically_relevant,
False as episode_open,
%(enc_start)s as encounter_started,
%(enc_last_affirmed)s as encounter_last_affirmed,
%(enc_type)s as encounter_l10n_type,
%(enc_pat)s as pk_patient,
-1 AS xmin_dummy
FROM
clin.get_hints_for_patient(%(enc_pat)s) AS hints
JOIN clin.soap_cat_ranks c_scr ON (c_scr.soap_cat = 'u')
"""
__SQL_union = """(
%s
) UNION ALL (
%s
)"""
#------------------------------------------------------------
class cGenericEMRItem(gmBusinessDBObject.cBusinessDBObject):
"""Represents an entry in clin.v_emr_journal."""
_cmd_fetch_payload = _SQL_get_generic_emr_items + "WHERE src_table = %(src_table)s AND src_pk = %(src_pk)s"
_cmds_store_payload = []
# [ """
# -- typically the underlying table name
# UPDATE xxx.xxx SET
# -- typically "table_col = %(view_col)s"
# xxx = %(xxx)s,
# xxx = gm.nullify_empty_string(%(xxx)s)
# WHERE
# pk = %(pk_XXX)s
# AND
# xmin = %(xmin_dummy)s
# RETURNING
# xmin AS xmin_dummy
# -- also return columns which are calculated in the view used by
# -- the initial SELECT such that they will further on contain their
# -- updated value:
# --, ...
# --, ...
# """
# ]
# view columns that can be updated:
_updatable_fields = ['']
#--------------------------------------------------------
def format(self, eol=None):
lines = self.formatted_header
lines.append(gmTools.u_box_horiz_4dashes * 40)
lines.extend(self._payload[self._idx['narrative']].strip().split('\n'))
lines.append('')
lines.append(_(' rev %s (%s) by %s in <%s>') % (
self._payload[self._idx['row_version']],
self._payload[self._idx['date_modified']],
self._payload[self._idx['modified_by']],
self._payload[self._idx['src_table']]
))
if eol is None:
return lines
return eol.join(lines)
#--------------------------------------------------------
def format_header(self, eol=None):
lines = []
lines.append(_('Chart entry (%s): %s [#%s in %s]') % (
self.i18n_soap_cat,
self.item_type_str,
self._payload[self._idx['src_pk']],
self._payload[self._idx['src_table']]
))
lines.append(_(' Modified: %s by %s (%s rev %s)') % (
self._payload[self._idx['date_modified']],
self._payload[self._idx['modified_by']],
gmTools.u_arrow2right,
self._payload[self._idx['row_version']]
))
lines.append('')
if self._payload[self._idx['health_issue']] is None:
issue_info = gmTools.u_diameter
else:
issue_info = '%s%s' % (
self._payload[self._idx['health_issue']],
gmTools.bool2subst(self._payload[self._idx['issue_active']], ' (' + _('active') + ')', ' (' + _('inactive') + ')', '')
)
lines.append(_('Health issue: %s') % issue_info)
if self._payload[self._idx['episode']] is None:
episode_info = gmTools.u_diameter
else:
episode_info = '%s%s' % (
self._payload[self._idx['episode']],
gmTools.bool2subst(self._payload[self._idx['episode_open']], ' (' + _('open') + ')', ' (' + _('closed') + ')', '')
)
lines.append(_('Episode: %s') % episode_info)
if self._payload[self._idx['encounter_started']] is None:
enc_info = gmTools.u_diameter
else:
enc_info = '%s - %s (%s)' % (
gmDateTime.pydt_strftime(self._payload[self._idx['encounter_started']], '%Y %b %d %H:%M'),
self._payload[self._idx['encounter_last_affirmed']].strftime('%H:%M'),
self._payload[self._idx['encounter_l10n_type']]
)
lines.append(_('Encounter: %s') % enc_info)
lines.append(_('Event: %s') % self._payload[self._idx['clin_when']].strftime('%Y %b %d %H:%M'))
if eol is None:
return lines
return eol.join(lines)
formatted_header = property(format_header)
#--------------------------------------------------------
def __get_item_type_str(self):
try:
return _MAP_generic_emr_item_table2type_str[self._payload[self._idx['src_table']]]
except KeyError:
return '[%s:%s]' % (
self._payload[self._idx['src_table']],
self._payload[self._idx['src_pk']]
)
item_type_str = property(__get_item_type_str)
#--------------------------------------------------------
def __get_i18n_soap_cat(self):
return gmSoapDefs.soap_cat2l10n[self._payload[self._idx['soap_cat']]]
i18n_soap_cat = property(__get_i18n_soap_cat)
#--------------------------------------------------------
def __get_specialized_item(self):
item_class = _MAP_generic_emr_item_table2class[self._payload[self._idx['src_table']]]
return item_class(aPK_obj = self._payload[self._idx['src_pk']])
specialized_item = property(__get_specialized_item)
#------------------------------------------------------------
def get_generic_emr_items(encounters=None, episodes=None, issues=None, patient=None, soap_cats=None, time_range=None, order_by=None, active_encounter=None, return_pks=False):
faulty_args = (
(patient is None) and
(encounters is None) and
(episodes is None) and
(issues is None) and
(active_encounter is None)
)
assert not faulty_args, 'one of <patient>, <episodes>, <issues>, <active_encounter> must not be None'
if (patient is not None) and (active_encounter is not None):
if patient != active_encounter['pk_patient']:
raise AssertionError('<patient> (%s) and <active_encounter>["pk_patient"] (%s) must match, if both given', patient, active_encounter['pk_patient'])
if order_by is None:
order_by = 'ORDER BY clin_when, pk_episode, scr, modified_when, src_table'
else:
order_by = 'ORDER BY %s' % order_by
if (patient is None) and (active_encounter is not None):
patient = active_encounter['pk_patient']
where_parts = []
args = {}
if patient is not None:
where_parts.append('c_vej.pk_patient = %(pat)s')
args['pat'] = patient
if soap_cats is not None:
# work around bug in psycopg2 not being able to properly
# adapt None to NULL inside tuples
if None in soap_cats:
where_parts.append('((c_vej.soap_cat = ANY(%(soap_cat)s)) OR (c_vej.soap_cat IS NULL))')
soap_cats.remove(None)
else:
where_parts.append('c_vej.soap_cat = ANY(%(soap_cat)s)')
args['soap_cat'] = soap_cats
if time_range is not None:
where_parts.append("c_vej.clin_when > (now() - '%s days'::interval)" % time_range)
if encounters is not None:
where_parts.append("c_vej.pk_encounter = ANY(%(encs)s)")
args['encs'] = encounters
if episodes is not None:
where_parts.append("c_vej.pk_episode = ANY(%(epis)s)")
args['epis'] = episodes
if issues is not None:
where_parts.append("c_vej.pk_health_issue = ANY(%(issues)s)")
args['issues'] = issues
cmd_journal = _SQL_get_generic_emr_items
if len(where_parts) > 0:
cmd_journal += '\nWHERE\n\t'
cmd_journal += '\t\tAND\t'.join(where_parts)
if active_encounter is None:
cmd = cmd_journal + '\n' + order_by
else:
args['pk_enc'] = active_encounter['pk_encounter']
args['enc_start'] = active_encounter['started']
args['enc_last_affirmed'] = active_encounter['last_affirmed']
args['enc_type'] = active_encounter['l10n_type']
args['enc_pat'] = active_encounter['pk_patient']
cmd = __SQL_union % (
cmd_journal,
_SQL_get_hints_as_generic_emr_items
) + '\n' + order_by
rows, idx = gmPG2.run_ro_queries(queries = [{'cmd': cmd, 'args': args}], get_col_idx = True)
if return_pks:
return [ {
'src_table': r['src_table'],
'src_pk': r['src_pk']
} for r in rows ]
return [ cGenericEMRItem(row = {
'data': r,
'idx': idx,
'pk_obj': {'src_table': r['src_table'], 'src_pk': r['src_pk']}
} ) for r in rows ]
#------------------------------------------------------------
def delete_xxx(pk_XXX=None):
# forward to specialized item
args = {'pk': pk_XXX}
cmd = u"DELETE FROM xxx.xxx WHERE pk = %(pk)s"
gmPG2.run_rw_queries(queries = [{'cmd': cmd, 'args': args}])
return True
#------------------------------------------------------------
def generic_item_type_str(table):
try:
return _MAP_generic_emr_item_table2type_str[table]
except KeyError:
return _('unmapped entry type from table [%s]') % table
#------------------------------------------------------------
# widget code
# remember to add in clinical item generic workflows
#------------------------------------------------------------
def edit_xxx(parent=None, xxx=None, single_entry=False, presets=None):
pass
#------------------------------------------------------------
def delete_xxx_xxx():
pass
#------------------------------------------------------------
def manage_xxx():
pass
#------------------------------------------------------------
#============================================================
# main - unit testing
#------------------------------------------------------------
if __name__ == '__main__':
if len(sys.argv) < 2:
sys.exit()
if sys.argv[1] != 'test':
sys.exit()
# gmI18N.activate_locale()
# gmI18N.install_domain('gnumed')
#--------------------------------------------------------
def test_gen_item():
for item in get_generic_emr_items (
order_by = None,
patient = 12,
return_pks = False
):
print('------------------------------')
print(item.format(eol = '\n'))
print(item.staff_id)
input('<next>')
#print(item.specialized_item)
#input('<next>')
#--------------------------------------------------------
test_gen_item()Functions
def delete_xxx(pk_XXX=None)-
Expand source code
def delete_xxx(pk_XXX=None): # forward to specialized item args = {'pk': pk_XXX} cmd = u"DELETE FROM xxx.xxx WHERE pk = %(pk)s" gmPG2.run_rw_queries(queries = [{'cmd': cmd, 'args': args}]) return True def delete_xxx_xxx()-
Expand source code
def delete_xxx_xxx(): pass def edit_xxx(parent=None, xxx=None, single_entry=False, presets=None)-
Expand source code
def edit_xxx(parent=None, xxx=None, single_entry=False, presets=None): pass def generic_item_type_str(table)-
Expand source code
def generic_item_type_str(table): try: return _MAP_generic_emr_item_table2type_str[table] except KeyError: return _('unmapped entry type from table [%s]') % table def get_generic_emr_items(encounters=None, episodes=None, issues=None, patient=None, soap_cats=None, time_range=None, order_by=None, active_encounter=None, return_pks=False)-
Expand source code
def get_generic_emr_items(encounters=None, episodes=None, issues=None, patient=None, soap_cats=None, time_range=None, order_by=None, active_encounter=None, return_pks=False): faulty_args = ( (patient is None) and (encounters is None) and (episodes is None) and (issues is None) and (active_encounter is None) ) assert not faulty_args, 'one of <patient>, <episodes>, <issues>, <active_encounter> must not be None' if (patient is not None) and (active_encounter is not None): if patient != active_encounter['pk_patient']: raise AssertionError('<patient> (%s) and <active_encounter>["pk_patient"] (%s) must match, if both given', patient, active_encounter['pk_patient']) if order_by is None: order_by = 'ORDER BY clin_when, pk_episode, scr, modified_when, src_table' else: order_by = 'ORDER BY %s' % order_by if (patient is None) and (active_encounter is not None): patient = active_encounter['pk_patient'] where_parts = [] args = {} if patient is not None: where_parts.append('c_vej.pk_patient = %(pat)s') args['pat'] = patient if soap_cats is not None: # work around bug in psycopg2 not being able to properly # adapt None to NULL inside tuples if None in soap_cats: where_parts.append('((c_vej.soap_cat = ANY(%(soap_cat)s)) OR (c_vej.soap_cat IS NULL))') soap_cats.remove(None) else: where_parts.append('c_vej.soap_cat = ANY(%(soap_cat)s)') args['soap_cat'] = soap_cats if time_range is not None: where_parts.append("c_vej.clin_when > (now() - '%s days'::interval)" % time_range) if encounters is not None: where_parts.append("c_vej.pk_encounter = ANY(%(encs)s)") args['encs'] = encounters if episodes is not None: where_parts.append("c_vej.pk_episode = ANY(%(epis)s)") args['epis'] = episodes if issues is not None: where_parts.append("c_vej.pk_health_issue = ANY(%(issues)s)") args['issues'] = issues cmd_journal = _SQL_get_generic_emr_items if len(where_parts) > 0: cmd_journal += '\nWHERE\n\t' cmd_journal += '\t\tAND\t'.join(where_parts) if active_encounter is None: cmd = cmd_journal + '\n' + order_by else: args['pk_enc'] = active_encounter['pk_encounter'] args['enc_start'] = active_encounter['started'] args['enc_last_affirmed'] = active_encounter['last_affirmed'] args['enc_type'] = active_encounter['l10n_type'] args['enc_pat'] = active_encounter['pk_patient'] cmd = __SQL_union % ( cmd_journal, _SQL_get_hints_as_generic_emr_items ) + '\n' + order_by rows, idx = gmPG2.run_ro_queries(queries = [{'cmd': cmd, 'args': args}], get_col_idx = True) if return_pks: return [ { 'src_table': r['src_table'], 'src_pk': r['src_pk'] } for r in rows ] return [ cGenericEMRItem(row = { 'data': r, 'idx': idx, 'pk_obj': {'src_table': r['src_table'], 'src_pk': r['src_pk']} } ) for r in rows ] def manage_xxx()-
Expand source code
def manage_xxx(): pass
Classes
class cGenericEMRItem (aPK_obj=None, row: dict = None, link_obj=None)-
Represents an entry in clin.v_emr_journal.
Init business object.
Call from child classes like so:
super().__init__(aPK_obj = aPK_obj, row = row, link_obj = link_obj)Args
aPK_obj- retrieve data from backend * a simple value the primary key WHERE condition must be a simple column * a dictionary of values the primary key WHERE condition must be a subselect consuming the dict and producing the single-value primary key
row- must hold the fields * idx: a dict mapping field names to position * data: the field values in a list (as returned by cursor.fetchone() in the DB-API) * pk_field: the name of the primary key field OR * pk_obj: a dictionary suitable for passed to cursor.execute and holding the primary key values, used for composite PKs
Examples
row = { 'data': rows[0], 'idx': idx, 'pk_field': 'pk_XXX (the PK column name)', 'pk_obj': {'pk_col1': pk_col1_val, 'pk_col2': pk_col2_val} } rows, idx = gmPG2.run_ro_queries(queries = [{'cmd': cmd, 'args': args}], get_col_idx = True) objects = [ cChildClass(row = {'data': r, 'idx': idx, 'pk_field': 'the PK column name'}) for r in rows ]
Expand source code
class cGenericEMRItem(gmBusinessDBObject.cBusinessDBObject): """Represents an entry in clin.v_emr_journal.""" _cmd_fetch_payload = _SQL_get_generic_emr_items + "WHERE src_table = %(src_table)s AND src_pk = %(src_pk)s" _cmds_store_payload = [] # [ """ # -- typically the underlying table name # UPDATE xxx.xxx SET # -- typically "table_col = %(view_col)s" # xxx = %(xxx)s, # xxx = gm.nullify_empty_string(%(xxx)s) # WHERE # pk = %(pk_XXX)s # AND # xmin = %(xmin_dummy)s # RETURNING # xmin AS xmin_dummy # -- also return columns which are calculated in the view used by # -- the initial SELECT such that they will further on contain their # -- updated value: # --, ... # --, ... # """ # ] # view columns that can be updated: _updatable_fields = [''] #-------------------------------------------------------- def format(self, eol=None): lines = self.formatted_header lines.append(gmTools.u_box_horiz_4dashes * 40) lines.extend(self._payload[self._idx['narrative']].strip().split('\n')) lines.append('') lines.append(_(' rev %s (%s) by %s in <%s>') % ( self._payload[self._idx['row_version']], self._payload[self._idx['date_modified']], self._payload[self._idx['modified_by']], self._payload[self._idx['src_table']] )) if eol is None: return lines return eol.join(lines) #-------------------------------------------------------- def format_header(self, eol=None): lines = [] lines.append(_('Chart entry (%s): %s [#%s in %s]') % ( self.i18n_soap_cat, self.item_type_str, self._payload[self._idx['src_pk']], self._payload[self._idx['src_table']] )) lines.append(_(' Modified: %s by %s (%s rev %s)') % ( self._payload[self._idx['date_modified']], self._payload[self._idx['modified_by']], gmTools.u_arrow2right, self._payload[self._idx['row_version']] )) lines.append('') if self._payload[self._idx['health_issue']] is None: issue_info = gmTools.u_diameter else: issue_info = '%s%s' % ( self._payload[self._idx['health_issue']], gmTools.bool2subst(self._payload[self._idx['issue_active']], ' (' + _('active') + ')', ' (' + _('inactive') + ')', '') ) lines.append(_('Health issue: %s') % issue_info) if self._payload[self._idx['episode']] is None: episode_info = gmTools.u_diameter else: episode_info = '%s%s' % ( self._payload[self._idx['episode']], gmTools.bool2subst(self._payload[self._idx['episode_open']], ' (' + _('open') + ')', ' (' + _('closed') + ')', '') ) lines.append(_('Episode: %s') % episode_info) if self._payload[self._idx['encounter_started']] is None: enc_info = gmTools.u_diameter else: enc_info = '%s - %s (%s)' % ( gmDateTime.pydt_strftime(self._payload[self._idx['encounter_started']], '%Y %b %d %H:%M'), self._payload[self._idx['encounter_last_affirmed']].strftime('%H:%M'), self._payload[self._idx['encounter_l10n_type']] ) lines.append(_('Encounter: %s') % enc_info) lines.append(_('Event: %s') % self._payload[self._idx['clin_when']].strftime('%Y %b %d %H:%M')) if eol is None: return lines return eol.join(lines) formatted_header = property(format_header) #-------------------------------------------------------- def __get_item_type_str(self): try: return _MAP_generic_emr_item_table2type_str[self._payload[self._idx['src_table']]] except KeyError: return '[%s:%s]' % ( self._payload[self._idx['src_table']], self._payload[self._idx['src_pk']] ) item_type_str = property(__get_item_type_str) #-------------------------------------------------------- def __get_i18n_soap_cat(self): return gmSoapDefs.soap_cat2l10n[self._payload[self._idx['soap_cat']]] i18n_soap_cat = property(__get_i18n_soap_cat) #-------------------------------------------------------- def __get_specialized_item(self): item_class = _MAP_generic_emr_item_table2class[self._payload[self._idx['src_table']]] return item_class(aPK_obj = self._payload[self._idx['src_pk']]) specialized_item = property(__get_specialized_item)Ancestors
Instance variables
var formatted_header-
Expand source code
def format_header(self, eol=None): lines = [] lines.append(_('Chart entry (%s): %s [#%s in %s]') % ( self.i18n_soap_cat, self.item_type_str, self._payload[self._idx['src_pk']], self._payload[self._idx['src_table']] )) lines.append(_(' Modified: %s by %s (%s rev %s)') % ( self._payload[self._idx['date_modified']], self._payload[self._idx['modified_by']], gmTools.u_arrow2right, self._payload[self._idx['row_version']] )) lines.append('') if self._payload[self._idx['health_issue']] is None: issue_info = gmTools.u_diameter else: issue_info = '%s%s' % ( self._payload[self._idx['health_issue']], gmTools.bool2subst(self._payload[self._idx['issue_active']], ' (' + _('active') + ')', ' (' + _('inactive') + ')', '') ) lines.append(_('Health issue: %s') % issue_info) if self._payload[self._idx['episode']] is None: episode_info = gmTools.u_diameter else: episode_info = '%s%s' % ( self._payload[self._idx['episode']], gmTools.bool2subst(self._payload[self._idx['episode_open']], ' (' + _('open') + ')', ' (' + _('closed') + ')', '') ) lines.append(_('Episode: %s') % episode_info) if self._payload[self._idx['encounter_started']] is None: enc_info = gmTools.u_diameter else: enc_info = '%s - %s (%s)' % ( gmDateTime.pydt_strftime(self._payload[self._idx['encounter_started']], '%Y %b %d %H:%M'), self._payload[self._idx['encounter_last_affirmed']].strftime('%H:%M'), self._payload[self._idx['encounter_l10n_type']] ) lines.append(_('Encounter: %s') % enc_info) lines.append(_('Event: %s') % self._payload[self._idx['clin_when']].strftime('%Y %b %d %H:%M')) if eol is None: return lines return eol.join(lines) var i18n_soap_cat-
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def __get_i18n_soap_cat(self): return gmSoapDefs.soap_cat2l10n[self._payload[self._idx['soap_cat']]] var item_type_str-
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def __get_item_type_str(self): try: return _MAP_generic_emr_item_table2type_str[self._payload[self._idx['src_table']]] except KeyError: return '[%s:%s]' % ( self._payload[self._idx['src_table']], self._payload[self._idx['src_pk']] ) var specialized_item-
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def __get_specialized_item(self): item_class = _MAP_generic_emr_item_table2class[self._payload[self._idx['src_table']]] return item_class(aPK_obj = self._payload[self._idx['src_pk']])
Methods
def format_header(self, eol=None)-
Expand source code
def format_header(self, eol=None): lines = [] lines.append(_('Chart entry (%s): %s [#%s in %s]') % ( self.i18n_soap_cat, self.item_type_str, self._payload[self._idx['src_pk']], self._payload[self._idx['src_table']] )) lines.append(_(' Modified: %s by %s (%s rev %s)') % ( self._payload[self._idx['date_modified']], self._payload[self._idx['modified_by']], gmTools.u_arrow2right, self._payload[self._idx['row_version']] )) lines.append('') if self._payload[self._idx['health_issue']] is None: issue_info = gmTools.u_diameter else: issue_info = '%s%s' % ( self._payload[self._idx['health_issue']], gmTools.bool2subst(self._payload[self._idx['issue_active']], ' (' + _('active') + ')', ' (' + _('inactive') + ')', '') ) lines.append(_('Health issue: %s') % issue_info) if self._payload[self._idx['episode']] is None: episode_info = gmTools.u_diameter else: episode_info = '%s%s' % ( self._payload[self._idx['episode']], gmTools.bool2subst(self._payload[self._idx['episode_open']], ' (' + _('open') + ')', ' (' + _('closed') + ')', '') ) lines.append(_('Episode: %s') % episode_info) if self._payload[self._idx['encounter_started']] is None: enc_info = gmTools.u_diameter else: enc_info = '%s - %s (%s)' % ( gmDateTime.pydt_strftime(self._payload[self._idx['encounter_started']], '%Y %b %d %H:%M'), self._payload[self._idx['encounter_last_affirmed']].strftime('%H:%M'), self._payload[self._idx['encounter_l10n_type']] ) lines.append(_('Encounter: %s') % enc_info) lines.append(_('Event: %s') % self._payload[self._idx['clin_when']].strftime('%Y %b %d %H:%M')) if eol is None: return lines return eol.join(lines)
Inherited members